Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0410 ATGGTCCAAGCGGCAGCATTAAATCAAATAGAATCTGACTTGACTCCCCTTCTTCTTCATTGTCTTCTTCTTCATCACTTGACTCAAGAAACAATGCGTCCAATCTCAGTGTTGGTGGTTCTGGCGGTTCTATCAGCGGCAGCAGAGTCACTGAACCAAGAAGGACTGTTCCTGTATGAAATGAAGGTCGCCATGGAAGATCCTCATTCCACGCTCTCCAACTGGAACACCAGAGACTCCACTCCCTGCAACTGGTTCGGTGTCACCTGCCACTCCGACACCGTCGTCACCCTCGACCTCTCCTCCGCCAACCTCTTTGGCCCATTCCCCTCTCACTCCCTCTGCCGCCTCCGCAACCTCACCACCCTCATCCTCTTCAACAACTCCATCAACGACACTCTCCCCTCCGACATCTCCCTCTGCCGCTCCCTTCTCCACCTCGACCTCTCCCAGAACCTCCTCACCGGACCCCTCCCTCATTCTCTCTCCTTGCTCCCCAACCTCCGCCACCTCGACCTCGCCGGAAACAACTTCTCCGGCCCCATCCCTCCCTCCTTCGGAGCCTTCCAGAAACTCCAGGTCATCAGCCTCGTCTACAATCTTCTAGAAGGAACCATACCACCTTCCCTCGGCAACATCACCACCCTCAAGATGCTCAACCTCTCTTACAACCCATTTTCACCGGCTCCGATTGCGCCGGAGCTCGGTAACCTCACGAACCTTGAGGTTCTGTGGCTCACTCAGTGCAACCTCGTCGGTGAAATACCCGAATCACTCGGTAACCTCAAGAGCCTCGTCGACTTGGACCTTGCATTCAATAACCTCCACGGTTCCATTCCCGCTTCGCTCACCGGGTTGACTCGCCTGGTTCAGCTCGAGTTGTATAACAACTCGTTGTCCGGCGAGTTACCCAAGGGAATGTCGAACCTTACCTCCTTGAGGCTCGTTGATCTGTCCATGAACCACTTGGAAGGTGAACTTCCCGATGAGTTCTGCCGTTTGCCGCTCGAAAGTCTCAACCTTTACGAGAATCGCTTCCAAGGGAACTTGCCGGCGACCATTGCAAACTCGCCGAACCTCTATGAGTTGAGGTTGTTCGACAACAGGTTCACCGGGAAGTTGCCGGAGAATCTGGGGAAGAATGCGCCGTTGAGATGGATTGATCTCTCGACCAACCAGTTCTCCGGTCCCATTCCGGCCACTCTATGCGATCACGGCCAGTTGGAGGAGCTTCTGTTGATATATAACTCGTTTTCCGGCGAGGTTCCGGCGAGTCTTGGCGCATGCACGAGCTTAACGCGTGTAAGGCTCGGTTTCAACCGGTTTTCCGGCGACATTCCGGCGGGTTTGTGGGGTCTTCCTCACGTGTCTCTGCTTGAGCTTGTCGATAACTCGTTTTCTGGTTCAATCGCGAGTACCATTGCCGGAGCGAGGAATCTTTCACTGTTGAGGCTTTCAAAGAACGGTTTCGAGGGTCCAATCCCTCAAGAGATTGGATGGTTGGAAACTCTTCAGGAATTTTCTGGTGGCGATAACAAGTTCAATGGCTCGTTGCCCCAGAGTTTTGTGAATCTTGGTCAGCTTGGTACTCTTGATCTGCATAACAATAAGCTCAGTGGAGAGCTTCCCAATGAGATTAAATCATGGAAGAAACTGAACGAGTTGAATTTGGCTAACAATGAGATTGGTGGTGAAATCCCTAAGGAAATTGGTAGTTTGTCAGTGCTTAATTTTCTTGATCTTTCTAATAACAAGTTTTCTGGGAAAGTACCCATTGGTTTGCAGAATTTGAGGCTGAATGAGCTCAATTTGTCTCATAATCAGTTAAATGGAGAACTTCCCCCAATGTTGGCTAAGGATATGTACAAGGCTAGCTTTCTTGGTAACCCTGGTTTGTGTGGGGATTTGAAGGGTTTATGTAATGGAAGAGATAAGGATAAGAATAGAAGCTTTGTTTGGTTGCTTAGAACCATGTTCATTGTTGCCATTTTGGTGTTTGTTGTTGGTGTGGTATGGTTCTACTTCAAGTACAAGGGTTTCAAGAATGCAAGGGCTATTGATAAGTCAAAGTGGACACTGATGTCATTTCACAAATTGGGTTTTGATGAGGATGAGATCTTGAACTGCCTTGATGAAGATAATGTGATAGGAAGCGGATCTTCTGGGAAAGTCTACAAGGTTGTGCTTAGCAATGGTGAAGCTGTCGCCGTGAAGAAGATATGGGAAGGGGTTAAGAAGGAAATAGAATGTGGTGGAGATGTCGAAAATGGCCGCTTTCAAGACAATGCTTTTGATGCAGAGGTTGAGACATTGGGTAAAATTAGGCACAAGAACATTGTGAAGCTCTGGTGCTGCTGCACCACAAGGGATTGCAAGCTGTTAGTTTATGAGTACATGCCGAATGGAAGCCTTGGTGATTTGCTGCATAGCAGCAAAGGAGGGTTGTTGGATTGGCCAACCAGGTACAAGATAGCGGTTGATGCCGCAGAAGGCCTCTCTTATCTGCACCATGATTGTGTTCCTCCAATTGTACATAGAGACGTGAAATCTAACAATATCTTGCTGGATGGAGAGTTTGGTGCAAGGGTAGCAGATTTCGGAGTAGCTAAGGTTGTCGAAACCACCGGAAAAGGAACAAAATCCATGTCTGTCATAGCAGGGTCTTGTGGATATATTGCACCAGAATATGCATACACGCTTAGAGTGAATGAGAAGAGTGACATATATAGCTTTGGTGTTGTGATACTAGAGTTGGTTAGTGGAAGGAGGCCGGTAGACCCTGAATTTGGGGAAAAGGACTTGGTTTCATGGGTTTGCACAACCTTGGATCAAAAAGGTGTGGAGCATGTGGTTGACTCAAGGCTAGATTCTTCTTTCAAACAAGATATATGTAAGGTGCTCAACATTGGCCTTGTGTGCACAAGCCCCCTCCCAATAAACCGGCCTGCAATGAGAAGAGTGGTGAAGATGTTGCAAGAGCTTGGCACCACCACCCCCCCTTACCCCCACAGATATCAACAGAACAAGTCAACCAAGAATGATGGCAATTTGCCCCCTTATTACTATGATGATGGCTCTCATCATGGAAGTATTGCTTAG 3099 0.4847 MVQAAALNQIESDLTPLLLHCLLLHHLTQETMRPISVLVVLAVLSAAAESLNQEGLFLYEMKVAMEDPHSTLSNWNTRDSTPCNWFGVTCHSDTVVTLDLSSANLFGPFPSHSLCRLRNLTTLILFNNSINDTLPSDISLCRSLLHLDLSQNLLTGPLPHSLSLLPNLRHLDLAGNNFSGPIPPSFGAFQKLQVISLVYNLLEGTIPPSLGNITTLKMLNLSYNPFSPAPIAPELGNLTNLEVLWLTQCNLVGEIPESLGNLKSLVDLDLAFNNLHGSIPASLTGLTRLVQLELYNNSLSGELPKGMSNLTSLRLVDLSMNHLEGELPDEFCRLPLESLNLYENRFQGNLPATIANSPNLYELRLFDNRFTGKLPENLGKNAPLRWIDLSTNQFSGPIPATLCDHGQLEELLLIYNSFSGEVPASLGACTSLTRVRLGFNRFSGDIPAGLWGLPHVSLLELVDNSFSGSIASTIAGARNLSLLRLSKNGFEGPIPQEIGWLETLQEFSGGDNKFNGSLPQSFVNLGQLGTLDLHNNKLSGELPNEIKSWKKLNELNLANNEIGGEIPKEIGSLSVLNFLDLSNNKFSGKVPIGLQNLRLNELNLSHNQLNGELPPMLAKDMYKASFLGNPGLCGDLKGLCNGRDKDKNRSFVWLLRTMFIVAILVFVVGVVWFYFKYKGFKNARAIDKSKWTLMSFHKLGFDEDEILNCLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKIWEGVKKEIECGGDVENGRFQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGEFGARVADFGVAKVVETTGKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVSGRRPVDPEFGEKDLVSWVCTTLDQKGVEHVVDSRLDSSFKQDICKVLNIGLVCTSPLPINRPAMRRVVKMLQELGTTTPPYPHRYQQNKSTKNDGNLPPYYYDDGSHHGSIA* 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0410 1032 Pfam Leucine Rich Repeat 240 262 IPR001611 GO:0005515
Ahy20g0410 1032 Gene3D Ribonuclease Inhibitor 164 230 IPR032675 -
Ahy20g0410 1032 Gene3D Ribonuclease Inhibitor 56 163 IPR032675 -
Ahy20g0410 1032 Gene3D Transferase(Phosphotransferase) domain 1 799 1013 - -
Ahy20g0410 1032 SUPERFAMILY L domain-like 384 633 - -
Ahy20g0410 1032 SUPERFAMILY RNI-like 98 447 - -
Ahy20g0410 1032 PANTHER LRR RECEPTOR-LIKE KINASE 35 1006 - -
Ahy20g0410 1032 MobiDBLite consensus disorder prediction 999 1015 - -
Ahy20g0410 1032 ProSitePatterns Protein kinases ATP-binding region signature. 716 739 IPR017441 GO:0005524
Ahy20g0410 1032 SUPERFAMILY Protein kinase-like (PK-like) 705 992 IPR011009 -
Ahy20g0410 1032 MobiDBLite consensus disorder prediction 998 1032 - -
Ahy20g0410 1032 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Ahy20g0410 1032 Gene3D Ribonuclease Inhibitor 231 336 IPR032675 -
Ahy20g0410 1032 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 35 1006 - -
Ahy20g0410 1032 Gene3D Ribonuclease Inhibitor 337 642 IPR032675 -
Ahy20g0410 1032 Pfam Leucine rich repeat N-terminal domain 52 90 IPR013210 -
Ahy20g0410 1032 SMART LRR_typ_2 286 309 IPR003591 -
Ahy20g0410 1032 SMART LRR_typ_2 310 334 IPR003591 -
Ahy20g0410 1032 SMART LRR_typ_2 117 141 IPR003591 -
Ahy20g0410 1032 SMART LRR_typ_2 238 262 IPR003591 -
Ahy20g0410 1032 SMART LRR_typ_2 165 191 IPR003591 -
Ahy20g0410 1032 SMART LRR_typ_2 525 548 IPR003591 -
Ahy20g0410 1032 ProSiteProfiles Protein kinase domain profile. 710 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0410 1032 Gene3D Phosphorylase Kinase; domain 1 694 798 - -
Ahy20g0410 1032 Pfam Leucine rich repeat 118 178 IPR001611 GO:0005515
Ahy20g0410 1032 SMART serkin_6 710 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0410 1032 Pfam Protein kinase domain 712 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0410 Ahy-Chr20 4156164 4159859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0410 50 1032 Receptor kinase-like Gene Family AT1G28440 68.655 0.0 1397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy20g0410 Pkinase 1.20E-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0410 - - gmx:100819887 1521.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0410 20 4156164 4159859 Ahy20g0410 20 4156164 4159859 ECH
Ahy20g0410 20 4156164 4159859 Ahy13g3381 13 131038393 131042405 ECH
Ahy20g0410 20 4156164 4159859 Ahy10g0227 10 2082725 2086356 hybridization