Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0390 ATGGAGTTGGTGGTGGTGAGAATGATGATAATAACAATGGCATTAATAATAATAATGCCATTATATTATTCAGTAGTTGCTAAAGTGGACATTGGTCTCGTGAGGCAATTGGCTGCAAAGAACAATGTTTCATGCATATTGGTTTTTGGAGACTCAAGTGTTGACCCTGGCAACAACAATGTCCTTGGCACCACCATGAAAAGCAACTTCCCTCCTTATGGCAAGAACTTCTTTAACGCCCGCCCAACCGGAAGGTTTAGTAATGGCAGACTTGCCACTGATTTCATTGCTGATGAAGCAATGGGGTTCAGAAAAATAGTTCCACCATTTCTTGACCCAAATTTGAAGCTAGAAGATCTGCCATACGGTGTTAGTTTTGCATCAGCAGCTACAGGTTATGATGATCTTACTGCCAATATTTCGAATGTTCTACCAGTATCCAAACAACTAGAGTATTTTGAGCATTACAAGATTCACATGAGGAAATTGTTGGGAGAGAAAAGAGCTGAATTCATTATAAGGAATGCATTGTATGTGATAAGTATGGGCACAAATGATTTCCTACAAAACTATTTCTTGGAGGATACTCGCCCAAAGCAATACAGCTTGCAGAAGTTTGAGGAATTCTTGCTCTCCCAAATGACTAAGGACATTGAGATGATGCATAGGCTAGGGGCCCAGAGGTTAGTTGTTGTTGGGGTCCTACCACTTGGGTGCATTCCACTTATGATGACCCTTAAGAACACCAAGACTTGTGATACAACTTTGAACAATGTGGCCCACTCATTCAATGCAAAGCTATCACTCCAATTGACCCAATTGAAGGCCCAATTGGGCATGAAGACCGCTTATGTTAATGTTTTTGGTATGATCCAAAACGCAGTATTGGACCCCCAAAAATACGGTTTTGTGGAAACTACAAAAGGATGCTGTGGAACAGGGTTAGTAGAATATGGTGATTCATGCAAAGGGTTGACTACTTGTTCAGATCCTGATCAATACATCTTCTGGGATGCTGTTCATCCAACCCAGAAGATGTACAAGATTATCGCTGATGAGGCCATTGAATCCATCGCTAATGAAATTGTTTAG 1092 0.4093 MELVVVRMMIITMALIIIMPLYYSVVAKVDIGLVRQLAAKNNVSCILVFGDSSVDPGNNNVLGTTMKSNFPPYGKNFFNARPTGRFSNGRLATDFIADEAMGFRKIVPPFLDPNLKLEDLPYGVSFASAATGYDDLTANISNVLPVSKQLEYFEHYKIHMRKLLGEKRAEFIIRNALYVISMGTNDFLQNYFLEDTRPKQYSLQKFEEFLLSQMTKDIEMMHRLGAQRLVVVGVLPLGCIPLMMTLKNTKTCDTTLNNVAHSFNAKLSLQLTQLKAQLGMKTAYVNVFGMIQNAVLDPQKYGFVETTKGCCGTGLVEYGDSCKGLTTCSDPDQYIFWDAVHPTQKMYKIIADEAIESIANEIV* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0390 363 PANTHER GDSL ESTERASE/LIPASE 11 361 - -
Ahy20g0390 363 Pfam GDSL-like Lipase/Acylhydrolase 46 353 IPR001087 GO:0016788
Ahy20g0390 363 Gene3D SGNH hydrolase 32 362 IPR036514 -
Ahy20g0390 363 SUPERFAMILY SGNH hydrolase 177 358 - -
Ahy20g0390 363 CDD SGNH_plant_lipase_like 45 358 IPR035669 -
Ahy20g0390 363 PANTHER GDSL ESTERASE/LIPASE EXL3 11 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0390 Ahy-Chr20 3988603 3992047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0390 25 362 Pollen Coat Proteome AT1G75930 33.621 5.76e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0390 - - gmx:100819691 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0390 20 3988603 3992047 Ahy20g0390 20 3988603 3992047 ECH
Ahy20g0390 20 3988603 3992047 Ahy10g0205 10 1879862 1883487 hybridization