Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0384 ATGGATCCTTCCAATAACAATGGAGGACAGAAGAGGCTCCTAGCCTTGGCACAACGGCTCAGACTTCACAAGCCCCCACCATTCTCTGAGGACATGTTAGAAAAGATCATGGAAGAAAGCAAAGGCAAGGTTGTTTCCCGAGTCGGTTTCCCGGAATCAGCCACTGCAATTGCTCAAAACCAAGGAGAATTTAGATTCAAGAGAGCTGCTGTTTTGATCTGCATCTTCGAAGGCGACGCAGGGGAACTACGAGTGATCCTCACCAAGCGATCTTCCAAGCTCTCTATGTACTCAGGTGAAGTGGCCTTGCCTGGTGGTAAGGCAGAAGAAGGTGATAATGATGATGGAGACACTGCAAAAAGAGAGGCAATGGAGGAAGTTGGGTTGGACCCTCAACTTGTTGATGTTGTTACATTTCTTGAACCATTCTTCTCTAAGTACCTCATAATAGTGGTTCCTGTCATTGGCATACTTCATGACAAAAAAGCATTCAAGCCAGCTCCAAACCCTGCTGAAGTAGAAGCTGTATTTGATGTACCTTTGGAAATGTTTCTCAAGGATGAGAAGAGGAAACAAGAAGAGAGGATATGGATGGGAGAGAAGTATGTGATACATTTATTTGAATATGAAATTGAGCACAAGAAATACCTCATATGGGGTTTAACAGCTGGCATGTTGATAAGGGCTGCATCAGTTGTGTATCAACGGCCACCAGCTTTCTTGGAGCTCAATCCTATAATGATTCCTAGGGATGTAACCAAGGATACTTTAATTCATTGA 780 0.4385 MDPSNNNGGQKRLLALAQRLRLHKPPPFSEDMLEKIMEESKGKVVSRVGFPESATAIAQNQGEFRFKRAAVLICIFEGDAGELRVILTKRSSKLSMYSGEVALPGGKAEEGDNDDGDTAKREAMEEVGLDPQLVDVVTFLEPFFSKYLIIVVPVIGILHDKKAFKPAPNPAEVEAVFDVPLEMFLKDEKRKQEERIWMGEKYVIHLFEYEIEHKKYLIWGLTAGMLIRAASVVYQRPPAFLELNPIMIPRDVTKDTLIH* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0384 259 CDD CoAse 67 227 IPR045121 GO:0010945
Ahy20g0384 259 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 64 245 - -
Ahy20g0384 259 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 1 62 - -
Ahy20g0384 259 SUPERFAMILY Nudix 62 229 IPR015797 -
Ahy20g0384 259 Pfam NUDIX domain 67 191 IPR000086 -
Ahy20g0384 259 PANTHER NUDIX HYDROLASE 1 62 IPR045121 GO:0010945
Ahy20g0384 259 ProSiteProfiles Nudix hydrolase domain profile. 66 200 IPR000086 -
Ahy20g0384 259 PANTHER NUDIX HYDROLASE 64 245 IPR045121 GO:0010945
Ahy20g0384 259 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 50 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0384 Ahy-Chr20 3939770 3941895 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0384 - K17879 gmx:100785664 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0384 20 3939770 3941895 Ahy20g0384 20 3939770 3941895 ECH
Ahy20g0384 20 3939770 3941895 Ahy13g3406 13 131419163 131421947 ECH
Ahy20g0384 20 3939770 3941895 Ahy10g0197 10 1840555 1842603 hybridization