Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0380 ATGGAAGAAGCTGCTTCAAACACCATCAAAATCTCCCAACGCACTCTCGTCTTCCCTTCTCGCACTCCCTTCTCCCAAAACCACGCCCTCCCTCTCTCCCCCCTCGACAACGACCCCAACCTCCGCCTCACTTTCCGCTACCTCCGCCTCTACATTTCCTCCCACCCCGACCCCTACGCCCTCATCTCCTCCTCCCTCTCCCAAGCTCTTTTTCACTACTACCCACTCGCCGGCACGCTTCGCTACCGTCTACATGACAACCGCCTCGAGAACTGGTGCGCTGCCGGTCAGGGAGTTCCCCTCATTCTTGCCACCGCCGCAGACATCACCCTCGAATCGGTAAACTACCTCGACGACCCGGATTTCAGCTTCATTGAGCAGTTAGTACCCGATCCGGGACCCGATGAGGGGATGGAGCACCCCTGCATACTCCAAATAACGGTGTTTGGGTGCGGTGGGTTCACGCTGGGTGCTGCCATGCACCACGCGCTTAACGACGGTATGGGCGGGAGCTTGTTCTTTAATGCGGTGGCCGAGTTGGCTCGCGGGTCGAGTCGGATATCGGTTGAACCGGTTTGGAACCGTGAGGTATTGTTGGGAGCGAGGAACCCGCCCCGGGTGGAGTCAGCGTTGGTAGGAGAGTTTCTGAGTTTGAAGAAGGGGGTTTTGCCGTACCAAGCGGACGCCGGTGATGTTGTGAGGGAGTGCTTCCACGTTCAGGAGGAGTCCTTGGAAGCGTTCAGGAGATCACTGTTTGAACAATCCGGTCTCAAATTCACCACTTTTGAGGTTCTTGCTGCTTACGTTTGGAGGTCCAAGGTTAGGGCGTCGGAAATGAAGGACAATGAGAAGGTTAAGTTGGCATACTCGGTTAACATACGAAAAGTGGTAAAGCCAACACTGCCAGATGGGTATTGGGGTAACGGTTGCGTTCCAATGTATGTTGAGGTGAGTGTGAAGGATTTAATAGAGAGGCCCATTTGGGAAACAGCGGAGCTAATCAAGAAGAGCAAGAGCAACGTGAGTGATGAGTATGTTCGGTCATTCATCGATTTTCAGGCAAAGCATTATGGGGATGGGATCACGGCAGGGAAAGGGGTTACTGGGTTCACCGATTGGAGACACTTGGGCCACTCGTCTGTGGACTTTGGATCCGGAGGCCCAGTTACTGTTTTGCCACTTGGCAGGAACCTCCTTGGAAGTGTTCACCCTTGCTTCTTCTTGCCTTATTCAACTGCCACTAAGAAGAAGGGTTTCAAGGTTTTGGTCACTCTGCCTCAACCCGCTTTGCCTGTTTTTCGAGAGGATATGCACGTTTTTTCCCCCTAG 1329 0.5372 MEEAASNTIKISQRTLVFPSRTPFSQNHALPLSPLDNDPNLRLTFRYLRLYISSHPDPYALISSSLSQALFHYYPLAGTLRYRLHDNRLENWCAAGQGVPLILATAADITLESVNYLDDPDFSFIEQLVPDPGPDEGMEHPCILQITVFGCGGFTLGAAMHHALNDGMGGSLFFNAVAELARGSSRISVEPVWNREVLLGARNPPRVESALVGEFLSLKKGVLPYQADAGDVVRECFHVQEESLEAFRRSLFEQSGLKFTTFEVLAAYVWRSKVRASEMKDNEKVKLAYSVNIRKVVKPTLPDGYWGNGCVPMYVEVSVKDLIERPIWETAELIKKSKSNVSDEYVRSFIDFQAKHYGDGITAGKGVTGFTDWRHLGHSSVDFGSGGPVTVLPLGRNLLGSVHPCFFLPYSTATKKKGFKVLVTLPQPALPVFREDMHVFSP* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0380 442 Pfam Transferase family 9 438 - -
Ahy20g0380 442 PANTHER ACYL TRANSFERASE 4 9 440 - -
Ahy20g0380 442 Gene3D - 224 436 IPR023213 -
Ahy20g0380 442 Gene3D - 8 212 IPR023213 -
Ahy20g0380 442 PANTHER N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE, PUTATIVE-RELATED 9 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0380 Ahy-Chr20 3927128 3929188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0380 61 395 Monolignol Biosynthesis Gene Families AT5G48930 28.818 2.51e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0380 - - gmx:100817021 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0380 20 3927128 3929188 Ahy20g0380 20 3927128 3929188 ECH
Ahy20g0380 20 3927128 3929188 Ahy10g0193 10 1822696 1824288 hybridization