Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0361 ATGCTCAATCATGAACATGCATGGACTGAAACTCAGCAAATTGATGTATGGACAAAGCTGACGTTACTGGGTGAAGTTGTTAAGCAAGTGAAGGAATTGAAGAAGAATGCAGAGGAAGCAAGCAAAGGGTTCCTGATCCCAATGGATTCCAATGAAGTGAAAGTTGAAGCAACTGAAGAAGGAGATGGATCATCAATGTCTTACAGGGCAACCGTGTGCTGCGAATACCCGCCTGATCTGCTATCTGATCTAAGACAAACATTTGATGGCCTCCAACTTCAATTGGTGAGTGCACAAGTATCCACTCTGGGAGACAGAGTGAAGAATGAAGTTGTGTATACTTGTTACTGCAAAGGGGATATGATGAGTAGTGTTGAGGCATGCCAAGTTCTTGCAAGGAATCTTCATCAGTCACTGTCTTCTCTACTCACCTCACATCCAATCCACAATAGAAGACTACGCTGTCTTCAAACATCTGCTGTCTCATGCTACAATTAA 498 0.4297 MLNHEHAWTETQQIDVWTKLTLLGEVVKQVKELKKNAEEASKGFLIPMDSNEVKVEATEEGDGSSMSYRATVCCEYPPDLLSDLRQTFDGLQLQLVSAQVSTLGDRVKNEVVYTCYCKGDMMSSVEACQVLARNLHQSLSSLLTSHPIHNRRLRCLQTSAVSCYN* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0361 165 PANTHER TRANSCRIPTION FACTOR BHLH30 19 146 IPR045847 GO:0003700|GO:0006355
Ahy20g0361 165 CDD ACT_UUR-ACR-like 71 107 - -
Ahy20g0361 165 PANTHER DNA BINDING PROTEIN-LIKE 19 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0361 Ahy-Chr20 3743143 3744067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0361 19 128 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 35.484 2.33e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0361 - - ahf:112783609 327.405