Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0347 ATGCCGGATTTCAATGATTCCGCTGTCCCTACTCCGCCACCCAACCCCCGTCCCATGCCCGTCCGCGAGGACTGCTGGACCGAGGAGGCATCTGCCACTCTCGTCGACGCCTGGGGCCGCCGCTACCTTGAGCTCAACCGCGGCAATCTTCGTCAGAAGGATTGGCAGGACGTTGCTGACACCGTCAACGCCCTCCATGGCCACACCAAGAAGACTCACCGAACCGATGTCCAGTGTAAGAACCGAATCGACACCATTAAGAAGAAATACAAGGTCGAGAAGGCTAGGGTTACGGCCTCCAACGGTACCGTTTCGTCCTCCTGGCCCTTCTTCGAGAAATTGGACGCGTTGATTGGCCCTAACTTCAACGCAAAGAAGAATTCCTCTTCGCCGTCCCCGTCTCCTCCAGTGGCTCTCCCGTTGTTGCCGTATCGGAAGGCCTCTGTGCCGGCTGTTTCTCCCGTTACTGCTGTGCCACCAGCCGCCGTGGCGCTGCCGCAGAAGCGGTCGGCGGCGGCAGCGATGGACGATGGGTACTTCAGGAGGAATTATTCGGCGATGGCAGCCGCTGCGGCTGCCGCTGAGGCCGATGAGGAGTATGAGGACGAAGAGGAAGAGGAAGAGGAAGATGAGGAGGAAGAAGAGGAGGATGGGAGGGGGAGCGAGGTGGAGGAAGGGGAGAGGGATAGAGAGGGGATGAGGAGGTTGGCCAAGGCAATAGAGAGGTTTGGGGAAGTGTATGAGAGAGTGGAAGCACAGAAGCTGAAGCAGATGGTGGATTTGGAGAAGCAGAGGATGCAGTTCGCCAAGGATCTCGAGGTGCAGAGGATGCAGATGTTTATGGACACGCAGGTTCAGTTGGAGAGGATTAAGCGCGGGAAGAGATCCGGGTCTAATGATATGTATAGCTAG 912 0.5757 MPDFNDSAVPTPPPNPRPMPVREDCWTEEASATLVDAWGRRYLELNRGNLRQKDWQDVADTVNALHGHTKKTHRTDVQCKNRIDTIKKKYKVEKARVTASNGTVSSSWPFFEKLDALIGPNFNAKKNSSSPSPSPPVALPLLPYRKASVPAVSPVTAVPPAAVALPQKRSAAAAMDDGYFRRNYSAMAAAAAAAEADEEYEDEEEEEEEDEEEEEEDGRGSEVEEGERDREGMRRLAKAIERFGEVYERVEAQKLKQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKRSGSNDMYS* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0347 303 Coils Coil 252 272 - -
Ahy20g0347 303 MobiDBLite consensus disorder prediction 191 233 - -
Ahy20g0347 303 Gene3D - 26 92 - -
Ahy20g0347 303 Coils Coil 186 217 - -
Ahy20g0347 303 MobiDBLite consensus disorder prediction 195 222 - -
Ahy20g0347 303 MobiDBLite consensus disorder prediction 1 20 - -
Ahy20g0347 303 MobiDBLite consensus disorder prediction 1 22 - -
Ahy20g0347 303 PANTHER OS05G0560600 PROTEIN 5 299 - -
Ahy20g0347 303 Pfam Myb/SANT-like DNA-binding domain 23 117 IPR044822 -
Ahy20g0347 303 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 5 299 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0347 Ahy-Chr20 3625998 3629912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0347 22 302 Trihelix Transcription Factor Family AT3G14180 32.113 4.09e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy20g0347 Myb_DNA-bind_4 2.10E-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0347 - - gmx:100815241 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0347 20 3625998 3629912 Ahy20g0347 20 3625998 3629912 ECH
Ahy20g0347 20 3625998 3629912 Ahy10g0158 10 1527892 1531792 hybridization