Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0324 ATGGCCATCAACCCATGGTTTCATGTCTCTGTTTTCTTGCTCTCTTTTTATTACACCTTTGCTTTATTATCTACTCTTGGAAAAAGCATCACCAGCACCGATGATGAATCTGCTCTTCTTGCATTCAAATCCTCCATTACTTCAGACCCAAATCACATGCTTAGTAACTGGTCAACCTCTTCATCATCTTCTTTATGCAACTGGGTTGGTGTCATTTGCGATTTGGACAACGGAAGAGTGAAGTCTCTGAATCTTAGTAACATGGGTCTCGTAGGTACCATTCCCCCGCACGTGGGGAACCTCTCTTTCCTTGAGGAGCTTGACCTCAAAGGCAACAACTTTCATGGTATGTTGCCACAGGAGATGTTTTCGTTGCATCAACTAAGGTTGCTCAACTTGAGTTCCAACGCGTTTGGTGGTTCCATTCCTCAATCTGTGTCCAACTTGTCCAACTTGGTCGAATTCGATTGTTCATCAAATCTCATCAATGGAACTATTCCACCCGTGATTGGCCAACTTCGCCAATTGAAGCTCTTCAATTTTGAGAATAACTCACTTTCTGGAATTATACCACCAACAGTTTCCAACCTCACTTTGCTTGAAGTATTCAACCTTGGTTCTAACTTCATATCAGGAGAAATTCCAAGAGAGGTGGGTGATCTTACTAAACTAAGGAGAATGAGATTTGATCACAATAAGCTTAGTGGCAAAATACCAGCAACATTATTCAACATGTCAGTGTTGTATGATTTCATTCTTCACTTCAATGATCTCTCTGGCACTCTTCCATCAAACATTTGTCAAGGCCTTCCCCAACTTTCTTACCTTTATCTCAACGAAAATGATCTCTCTGGTAAGATGCCAACTGTTTGGCATAACTGCCAAGAGTTGATCCATGTTAATCTATCCGTCAATGGTTTCGATAAAGGTCCCATGCCAAGCGATTTCGGAAACTTGACTAAGCTTCAGTATTTATATCTTGATGACAATAACTTGGAAGGTGAGGTTCCATTCTCCCTTTTAAACATCTCTTCTTTGGTGATAATGAGCCTTATGGAGAACAAGTTAAAGGGGCAGCTTCCAAGTGATATGTGTCATCTGCTCCCTCAACTGGAATGTTTGTACCTAGATACCAATCAATTTGAAGGGATCATTCCAAGATCAATTAGCAGATGCACACAACTCAAAGTTTTAAGACTAATGTATAACCAGTTTACAGGTACCATACCAGGTGAGCTTGCTGATCTGAACAATCTTCAGTATCTTATGCTTGGATTTAACAAATTGAGTGGAACTATTCCCCTAAAGCTTCTGAATAGTACAGCTTTGAGATTGTTGTATCTTTCATACAATTCTCTCTCAGGCACTCTTCCATCAGACAAAGGCTATAACCTTCCTAACCTGGATCAACTGCACTTAACTGGGAACAAATTTGTTGGAACCATTCCAAGTGGTTTATTCAATGCTACTTTGCTCACTAAACTGGACTTGAGTGAGAATCAATTCAGTGGAGTCATGCCAGCTGCGTTTCGAGATCTATCCATACTCGAAGTTCTCCATATAGGTGGCAATAACTTGACAACCGATAATGATTCTCATGAACTCGACTTCCTTACTTCCTTGACAAGTTCTACACATTTGAGAAGGATAATCCTATCTAACAATCCTTTAAATGCAACTCTTCCTAAATCAATTGGAAACTTGTCCCAGTCTTTGGTACTCTTTCAAGCAGATAATTGTGGAATCTATGGCAACATTCCAATGGAAGTAGGAAACATAACAAGCCTGTGGAATTTGAATTTATATGGGAATAATATATCTGGACCAATTCCTGCTACAATCAAAAGGTTACAGAACCTTCAGTCTTTGAATCTGAGCTACAATGGATTGCAGGGATCCATCATTGATGAGCTTTGTGAAATCAAGAGTTTAAGTGTGCTAGCTTTATCAAGCAACAAGCTTTCTGGAGCAATACCAGCATGCTTGGGAAATATGGATTCTCTTAGAAAGGTTTACATGGATTCTAATAAATTGAACTCAGGGATTCCATCTTCTTTCTGGAATCTCAATGACATCTTAGAGGTGAACCTGTCCTCCAATGCTTTAACTGGACAACTTTCACCAGGGATAGAAAAATTGAGAGCTCTTGTACTATTGGATCTATCAAGAAATGACATTTCAGGTGACATTCCTGCAATAAGTTCACTAGCTCTGCAAAATCTTTCCTTGGCAAGCAACAAGTTGCAAGGTTCCATTCCTGAATCACTTGGTAAGTTGGTAAGCTTAAACTCTTTGGACTTGTCTCAAAATCTTTTGTCTGGTTCCATTCCAAAATCCTTAGAGTCCCTTACTTTTCTTAAATACATCAACTTGTCCTACAATAACTTGCAAGGAGAGATTCCCAGTGGTGGACCTTTTGCAAATTTCACTGCTCAATCTTTCATGCATAATGAAGCACTCTGTGGTAACCCTCGCTTACAAGTCCCTCCATGTGCTAAACAAGATGGCAAAAGTTCAAGGCTAAAACTGATTTTAGCCATTTGCATACCCCTTGTAATAGTGTTAATCATTTTGATTCTTGCATGCATAATTGTTCGCCGACATAGAATAAAAGATGAGGAGAATCCAGCTGAAAAGAATTCATCAGACTTGGGAGCAGCAAAAAGGATTTCCTACTATGAACTTGTCCAAGCAACCAATGGATTTAATGAGAGTAACTTAATTGGAAAGGGAGGTTTCGGTTCTGTGTATCAAGGCATGCTCTCTAGTGGAATGATAGTTGCCATTAAAGTGATTAACGTGGACTTGGAAGCAACATCCAAGAGCTTTGATGCAGAATGCAATGCAATGCGCAATTTACGCCATCGAAATCTTGTTAAGGTTATCACTAGTTGCTCAAATGATGAGTTCAAATCTTTGGTGATGGAATTCATGCCAAATGGAAGCCTAGACAAATGGTTGTATTCACATAACTATTGTCTAGATTTCTTGCAAAGGTTGAATATAATGATGGATGTGGCATCTGCATTGGAATATCTTCATTATGGTTCTTCAATACCAGTTGTTCATTGTGATCTGAAGCCTAGTAATGTCTTACTGGATGAAGATATGGTTGCACATGTTAGTGACTTTGGCATTGCCAAGCTCTTGGATGAAGGACAATCCATAACACATACTAAGACCATGGCTACACTAGGCTATGTTGCACCAGAATATGGATCTAAAGGAATTATTTCAATCAAAGGTGATGTATACAGCTATGGAATCATGCTAATGGAAGTATTCACAAGAAAAATGCCAACAGATGATATGTTTGCTGCAGAGTTGAGCTTGAAAAGTTGGATCAACAACTCAATGCCAGATTCAGTGATGGAAGTTGTGGACTCTAATTTAATACAACTATATGGTGATGAAGATATTGATGTTGTATTGCCTCATATATCATCTGTGTTGAGATTAGCTTTGAGTTGTTGTGCAGATTCAGCTGAAGAACGAATTAAAATGACAGATGTGGTTGCAGCATTAACCAAGATCAAGAATGAGTTCACCTTAATGAAAGAATGA 3564 0.3903 MAINPWFHVSVFLLSFYYTFALLSTLGKSITSTDDESALLAFKSSITSDPNHMLSNWSTSSSSSLCNWVGVICDLDNGRVKSLNLSNMGLVGTIPPHVGNLSFLEELDLKGNNFHGMLPQEMFSLHQLRLLNLSSNAFGGSIPQSVSNLSNLVEFDCSSNLINGTIPPVIGQLRQLKLFNFENNSLSGIIPPTVSNLTLLEVFNLGSNFISGEIPREVGDLTKLRRMRFDHNKLSGKIPATLFNMSVLYDFILHFNDLSGTLPSNICQGLPQLSYLYLNENDLSGKMPTVWHNCQELIHVNLSVNGFDKGPMPSDFGNLTKLQYLYLDDNNLEGEVPFSLLNISSLVIMSLMENKLKGQLPSDMCHLLPQLECLYLDTNQFEGIIPRSISRCTQLKVLRLMYNQFTGTIPGELADLNNLQYLMLGFNKLSGTIPLKLLNSTALRLLYLSYNSLSGTLPSDKGYNLPNLDQLHLTGNKFVGTIPSGLFNATLLTKLDLSENQFSGVMPAAFRDLSILEVLHIGGNNLTTDNDSHELDFLTSLTSSTHLRRIILSNNPLNATLPKSIGNLSQSLVLFQADNCGIYGNIPMEVGNITSLWNLNLYGNNISGPIPATIKRLQNLQSLNLSYNGLQGSIIDELCEIKSLSVLALSSNKLSGAIPACLGNMDSLRKVYMDSNKLNSGIPSSFWNLNDILEVNLSSNALTGQLSPGIEKLRALVLLDLSRNDISGDIPAISSLALQNLSLASNKLQGSIPESLGKLVSLNSLDLSQNLLSGSIPKSLESLTFLKYINLSYNNLQGEIPSGGPFANFTAQSFMHNEALCGNPRLQVPPCAKQDGKSSRLKLILAICIPLVIVLIILILACIIVRRHRIKDEENPAEKNSSDLGAAKRISYYELVQATNGFNESNLIGKGGFGSVYQGMLSSGMIVAIKVINVDLEATSKSFDAECNAMRNLRHRNLVKVITSCSNDEFKSLVMEFMPNGSLDKWLYSHNYCLDFLQRLNIMMDVASALEYLHYGSSIPVVHCDLKPSNVLLDEDMVAHVSDFGIAKLLDEGQSITHTKTMATLGYVAPEYGSKGIISIKGDVYSYGIMLMEVFTRKMPTDDMFAAELSLKSWINNSMPDSVMEVVDSNLIQLYGDEDIDVVLPHISSVLRLALSCCADSAEERIKMTDVVAALTKIKNEFTLMKE* 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0324 1187 SUPERFAMILY Protein kinase-like (PK-like) 885 1175 IPR011009 -
Ahy20g0324 1187 SMART LRR_sd22_2 125 151 - -
Ahy20g0324 1187 SMART LRR_sd22_2 617 640 - -
Ahy20g0324 1187 SMART LRR_sd22_2 759 785 - -
Ahy20g0324 1187 SMART LRR_sd22_2 319 345 - -
Ahy20g0324 1187 SMART LRR_sd22_2 416 437 - -
Ahy20g0324 1187 SMART LRR_sd22_2 544 570 - -
Ahy20g0324 1187 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 128 191 - -
Ahy20g0324 1187 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 394 1184 - -
Ahy20g0324 1187 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 15 146 - -
Ahy20g0324 1187 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 175 308 - -
Ahy20g0324 1187 SUPERFAMILY L domain-like 31 339 - -
Ahy20g0324 1187 Gene3D Transferase(Phosphotransferase) domain 1 978 1186 - -
Ahy20g0324 1187 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 128 191 - -
Ahy20g0324 1187 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 394 1184 - -
Ahy20g0324 1187 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 15 146 - -
Ahy20g0324 1187 SMART LRR_typ_2 713 740 IPR003591 -
Ahy20g0324 1187 SMART LRR_typ_2 490 512 IPR003591 -
Ahy20g0324 1187 SMART LRR_typ_2 368 392 IPR003591 -
Ahy20g0324 1187 SMART LRR_typ_2 617 642 IPR003591 -
Ahy20g0324 1187 SMART LRR_typ_2 319 343 IPR003591 -
Ahy20g0324 1187 SMART LRR_typ_2 665 688 IPR003591 -
Ahy20g0324 1187 SMART LRR_typ_2 270 293 IPR003591 -
Ahy20g0324 1187 SMART LRR_typ_2 416 440 IPR003591 -
Ahy20g0324 1187 SMART LRR_typ_2 101 125 IPR003591 -
Ahy20g0324 1187 SMART LRR_typ_2 759 787 IPR003591 -
Ahy20g0324 1187 SMART LRR_typ_2 545 568 IPR003591 -
Ahy20g0324 1187 SMART LRR_typ_2 221 245 IPR003591 -
Ahy20g0324 1187 SMART LRR_typ_2 465 489 IPR003591 -
Ahy20g0324 1187 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1021 1033 IPR008271 GO:0004672|GO:0006468
Ahy20g0324 1187 PRINTS Leucine-rich repeat signature 492 505 - -
Ahy20g0324 1187 PRINTS Leucine-rich repeat signature 617 630 - -
Ahy20g0324 1187 Pfam Leucine rich repeat 369 429 IPR001611 GO:0005515
Ahy20g0324 1187 Pfam Leucine rich repeat 738 796 IPR001611 GO:0005515
Ahy20g0324 1187 Pfam Leucine rich repeat 79 137 IPR001611 GO:0005515
Ahy20g0324 1187 Pfam Leucine rich repeat 492 542 IPR001611 GO:0005515
Ahy20g0324 1187 SUPERFAMILY L domain-like 574 824 - -
Ahy20g0324 1187 Gene3D Ribonuclease Inhibitor 434 530 IPR032675 -
Ahy20g0324 1187 ProSiteProfiles Protein kinase domain profile. 902 1183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0324 1187 Gene3D Ribonuclease Inhibitor 32 193 IPR032675 -
Ahy20g0324 1187 Gene3D Phosphorylase Kinase; domain 1 884 977 - -
Ahy20g0324 1187 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Ahy20g0324 1187 ProSitePatterns Protein kinases ATP-binding region signature. 908 930 IPR017441 GO:0005524
Ahy20g0324 1187 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 309 410 - -
Ahy20g0324 1187 Pfam Protein kinase domain 903 1172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0324 1187 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 309 410 - -
Ahy20g0324 1187 SMART serkin_6 902 1184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0324 1187 SUPERFAMILY L domain-like 264 562 - -
Ahy20g0324 1187 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 175 308 - -
Ahy20g0324 1187 Gene3D Ribonuclease Inhibitor 531 839 IPR032675 -
Ahy20g0324 1187 Gene3D Ribonuclease Inhibitor 195 433 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0324 Ahy-Chr20 3414727 3419920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0324 642 802 Receptor kinase-like Gene Family AT3G47570 34.969 4.07e-12 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Ahy20g0324 Pkinase 4.30E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0324 - K13420 gmx:100784397 1170.99