Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0303 ATGAAAGGAGAAGATCGAGCAAGAATTGACAAGTTCTTGGAAGATTACAGGGCACTCAAGCCTACCAGATTCTCTTATGCTGATGTAAAGAGGATCACAAATGGTTTCAAGGACAAGCTGGGTGAAGGAGGTCATGGAGCAGTCTTCAAGGGCATGCTCTCCTCAGAAATCGGCGTAGCTGTCAAGATACTCAACAGCAACACGGAGGGTAAAGGAAAAGATTTCACCAACGAGGTGGGAACCATGGGAAAAATTCACCATGTCAATGTGGTTCGCTTACTTGGCTTTTGTGCGCAAGGAGTTCATTGTGCTCTAGTTTATGATTTCTTTCCAAAAGGTTCATTGCAAAACTTCATATCCACGCCAGATAACAAGGACGTCTTCCTTGGATGGGAGAAGCTTCACCAAATTGCCCTTGGTGTTGCTAGAGGCATTGAGTATCTTCACCATGGTTGTGAGCAACAGATCCTTCATTTTGACATCAATCCCCACAATATCTTACTAGATGACAACTTCACTCCCAAGATTACTGATTTTGGGCTTGCCAAGTTGTGTTCCAAAGATCAGAGCAAAGTTTCAATGACAGCAGCCAAGGGAACCATGGGCTACATTGCGCCTGAAATTGTCTCAAGAAACTTTGGAAATGTGTCTTACAAAGCAGACATTTATAGCTATGGGATATTGTTGCTTGAAATGGTAGGAGGAAGGAAAAACATAGAGATGGAAGTTGAGGGGTCTTTAAGGATTTTATACCCCGAATGGATGCACAACTTGCTTGATGGGGGAGATTTTCATGTACACATCGAAGATGAGGAAGACAATAAACTTGCAAAGAAAATTGCAATTGTTGGACTACAATGCATTCAGTGGCAGCCATCAGATCGTCCTTCCATCAAAACTGTCATAAGTCGTAGCCCGCTCTCAACTTGCAACCCTTTATCCCTCTTTTACAACTCTTGGAAACTTCAATCGGTGCTGCCTCCGCCGGCGCACCCTCCATCGGCGCGCCCTCCGTCGGCGTTCACTCTCGCTCGCAAGGCCTCCATCAGCGCTCGTTCTCTCTCGCTCAAACCTTACCTCCGTCGACGCTGA 1092 0.456 MKGEDRARIDKFLEDYRALKPTRFSYADVKRITNGFKDKLGEGGHGAVFKGMLSSEIGVAVKILNSNTEGKGKDFTNEVGTMGKIHHVNVVRLLGFCAQGVHCALVYDFFPKGSLQNFISTPDNKDVFLGWEKLHQIALGVARGIEYLHHGCEQQILHFDINPHNILLDDNFTPKITDFGLAKLCSKDQSKVSMTAAKGTMGYIAPEIVSRNFGNVSYKADIYSYGILLLEMVGGRKNIEMEVEGSLRILYPEWMHNLLDGGDFHVHIEDEEDNKLAKKIAIVGLQCIQWQPSDRPSIKTVISRSPLSTCNPLSLFYNSWKLQSVLPPPAHPPSARPPSAFTLARKASISARSLSLKPYLRRR* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0303 363 Gene3D Phosphorylase Kinase; domain 1 10 109 - -
Ahy20g0303 363 ProSitePatterns Protein kinases ATP-binding region signature. 40 62 IPR017441 GO:0005524
Ahy20g0303 363 SUPERFAMILY Protein kinase-like (PK-like) 16 303 IPR011009 -
Ahy20g0303 363 Pfam Protein kinase domain 37 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0303 363 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 303 - -
Ahy20g0303 363 ProSiteProfiles Protein kinase domain profile. 34 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0303 363 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 303 IPR045874 GO:0004672
Ahy20g0303 363 Gene3D Transferase(Phosphotransferase) domain 1 110 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0303 Ahy-Chr20 3182373 3184212 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0303 2 302 Receptor kinase-like Gene Family AT1G66980 48.377 2.96e-91 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy20g0303 Pkinase 4.20E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0303 - - aip:107619931 610.527