Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0301 ATGTGGATATGGTGCGAGGTAGGAATAAGCATTGTTTTGGTGTTACACCAAAGTTTGGTTGCCGGACAAAGGCAGAGCTGCGTGCCATCATCGTGCGGCAAAATTGCAAACATAAGTCATCCTTTCCGATTGAAAGATGACCCGGCGAATTGCGGGGACAGCAAGTACGAACTAGAATGCGTGAACGACGTGGCAATGTTACGGTTAACAGAGGAAGCAGATTACAAAGTGGAGGCCATAAATTACAACAACTACACAATCAGGTTAGTAGATCCCAACATTCAAGAGGATAATTGCTCCTCCCTCCCCCGCTACTTCTTGTACAGATTCAATTTCAGCGCTGACCCCTACCGCGTCTACCCTGTTTCCAATCATTGGGATGTCGATAACGCATACCATGCCACTCAAATGCAAGGCCCAGTTCTTGGAGATTATATCCCGCTATTTGAGCACATAATATACGTGAACTGTATCACAGCAGTGAGAGACGTGGACAAGAATAACGCTTCTTCCTCCTGCTTGGATCTGAATACATACGTAGTTGCTGGAGAGTTAGGAGCCACAGGATCGATATGGAAGCCTGGATGCCGCATCAACAAAATTGCTGCCACCTCTGGCTTGTTTCAATTCCAAAAACAGCATCCCTACAATGGTTGGGAATGGAAGGGTGAAATGGAAAAGGATGTCGATGATCCAATAGCATACAGTGATGTTCATAAGGCGCTGGCTTATGGATTTGAGGTCTCATGGTTGCATGCTATTTGCCATGAGCACCACTGTGGACCGGGAGCTTGCTACTTCAACCACACCGCTCAAAACGTTCTCTGTTATTCTCTCTGTTCTTATTCAAAGGGAGGAGCCCGCCGCTGTGGGTTTTGGAAGCAACTTCGAAGCTACACTCTAGATTATTTGCATCCGTTTTTTTACGGAATGTACACTCTAATAAGGTTTAAAACTCCGAAAGATATATGGGAAACATCGTTTTTGGTTCATCCCAAGACAGCGCTCATGGGGTGGTACGGTCTATTATCATATATGGTAACAAGGATTCTGTTCGGGGTTGCATTATTAGTTGTGTTATTGATCTACAAATGGCGAAGAAGAAATTTATCAACGTATGTGAATATTGAGAATTTTCTACAGGATAATCACCTCGCTCCCATAAGGTACTCATATAGAGAAATTAAAAGTATGACACAAAATTTCAAGGTCAAATTGGGCCAAGGTGGTTTCGGCTCTGTGTACAAGGGCAAATTACGCAGTGGTCCTCATGTAGCAATAAAGATGTTGAAACAGTCCAAGACTAATGGTCAGGATTTTATTAATGAGGTTGCAACCATTGGGAGAATACATCATGTGAATGTGGTTCGACTCATTGGATTTTGTGTTGAAGGATCAAAGCGTGCACTTGTTTATGATTTCATGTCTAATGGTTCGCTTGATAAATATATTTTCTCTAAGGAAGAAAGCATTCATTTGAGTTCTGAGAAAATATATGAGATATCTTTGGGAGTAGCTCGCGGGATTTCATATCTTCATCGGGGTTGTGCTATGCAAATTCTACACTTTGATATCAAGCCCCATAATATCCTTCTTGATGAAAACTTCATCCCCAAGATTTCGGATTTTGGATTAGCTAAATTGTATCCCATAGATCGTAGCATTGTCACTTTAACTGACAAAAGAGGAACCATTGGCTACATTGCTCCGGAATTGTTTTACAATAACCTTGGTGGAGTCTCCTATAAAGCTGATGTTTATAGCTTTGGAATGTTGTTGATGGAAGTGGCAGGTAGAAGGAAGAATTTGAATCCACATGCTGAAAATTCAAGCCAAGTATTCTTTCCAACTTGGGTCTATGAACAAGTTAGCAAAGGAAAAGAAGTTGAATTGGACTGTAATGGAACAGAAGTTGAAAAGAGTATGGCAAAGAAGCTGATCATAACTGCATTGTGGTGTATACAACTCAAACCTTCCGATCGACCTTCAATGAACCATGTAGTAGAGATGCTTGAAGGAGAACTTTACAATCTAACAATGCCTCCGAAGCCTTTGTTATATCCAACTGAAAACTTGAATTCTGAACAAACCAGAGCAGGTCACTCAACAAATGCTGCAGGTGATTTTGGTGAAACTATCACTAGTAATGCTACACTAGAGAATAGCTTATCTGGTAGAAATTGA 2184 0.4144 MWIWCEVGISIVLVLHQSLVAGQRQSCVPSSCGKIANISHPFRLKDDPANCGDSKYELECVNDVAMLRLTEEADYKVEAINYNNYTIRLVDPNIQEDNCSSLPRYFLYRFNFSADPYRVYPVSNHWDVDNAYHATQMQGPVLGDYIPLFEHIIYVNCITAVRDVDKNNASSSCLDLNTYVVAGELGATGSIWKPGCRINKIAATSGLFQFQKQHPYNGWEWKGEMEKDVDDPIAYSDVHKALAYGFEVSWLHAICHEHHCGPGACYFNHTAQNVLCYSLCSYSKGGARRCGFWKQLRSYTLDYLHPFFYGMYTLIRFKTPKDIWETSFLVHPKTALMGWYGLLSYMVTRILFGVALLVVLLIYKWRRRNLSTYVNIENFLQDNHLAPIRYSYREIKSMTQNFKVKLGQGGFGSVYKGKLRSGPHVAIKMLKQSKTNGQDFINEVATIGRIHHVNVVRLIGFCVEGSKRALVYDFMSNGSLDKYIFSKEESIHLSSEKIYEISLGVARGISYLHRGCAMQILHFDIKPHNILLDENFIPKISDFGLAKLYPIDRSIVTLTDKRGTIGYIAPELFYNNLGGVSYKADVYSFGMLLMEVAGRRKNLNPHAENSSQVFFPTWVYEQVSKGKEVELDCNGTEVEKSMAKKLIITALWCIQLKPSDRPSMNHVVEMLEGELYNLTMPPKPLLYPTENLNSEQTRAGHSTNAAGDFGETITSNATLENSLSGRN* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0301 727 ProSiteProfiles Protein kinase domain profile. 400 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0301 727 Pfam Wall-associated receptor kinase galacturonan-binding 27 91 IPR025287 GO:0030247
Ahy20g0301 727 MobiDBLite consensus disorder prediction 696 727 - -
Ahy20g0301 727 Pfam Protein kinase domain 403 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0301 727 PANTHER RUST RESISTANCE KINASE LR10-RELATED 5 700 IPR045874 GO:0004672
Ahy20g0301 727 ProSitePatterns Protein kinases ATP-binding region signature. 406 428 IPR017441 GO:0005524
Ahy20g0301 727 SUPERFAMILY Protein kinase-like (PK-like) 386 672 IPR011009 -
Ahy20g0301 727 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 5 700 - -
Ahy20g0301 727 Gene3D Phosphorylase Kinase; domain 1 376 474 - -
Ahy20g0301 727 Gene3D Transferase(Phosphotransferase) domain 1 475 682 - -
Ahy20g0301 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Ahy20g0301 727 SMART serkin_6 400 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0301 Ahy-Chr20 3171203 3174199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0301 20 687 Receptor kinase-like Gene Family AT5G38260 33.430 1.03e-106 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy20g0301 Pkinase 4.20E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0301 - - aip:107619931 1508.81