Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0278 ATGCAACTTCTCAACTTCTTTGGCTTCTTACTTGTTACACTTTGTTGCTTCCAGTTGCTGACAATATCCGAATCAAAATTACCAAAAGAAGAAGTTGAAGCTCTCAAAGAAATTACCAGTACAATGGGGGCGGTCTATTGGGAGTTTGATAATGATTCCTGTGACATTATAAGGGTTGGACTAACTCGAGAACCTCCTGACGAATCGGAGAGAAGCATTGTTTGTGACTGCAGTTTTGAAAATAATACTGTCTGTCATGTTACTAAGATAACCCTCAAGCGCCTTAGTCTACCTGGAGCACTCCCACCTCAACTGGTCAAGCTACCTTTTCTTCAAGTGATAGATTTTGCATACAATTGTTTAAATGGCACAATTCCAAAGGAATGGGCTTCAATGAATTTAACTTCCATCTCTCTTCTTGTGAATCGCTTGTCAGGGGAAATTCCAAAGCATGTAGGAAATATTACTGCTCTCACATACCTGATGCTGGAAGCAAACAATTTTTCTGGAGTTGTTCCACCTGAACTTGGGAAGCTAATCAACTTGCAGACCTTGGTACTGTCATCAAATCAGTTGACCGGGAACTTACCATCGGCACTTGCTGGGCTGCAAAATTTAACCGACTTTAGGATAAGTAGTAACAACTTTACAGGAACCATACCTGATTTCATAAAGAACTGGCAATTTCTCCAAAGACTAGAAATGCATGGAAGTGGACTAGAAGGACCGATTCCATCGAGTATATCTCTATTGAAGAACTTACTTCAGTTAAGAATCAGTGATATAAAAAGTCCTAGCCAGGTTTTTCCTTCACTGCAGAGCATGACAGCACTAACTACATTGGTTTTAAGGAACTGTAACCTGTCTGGGGAGATACCTTCATACATATGGACCTTGACAAATCTAGCAACTTTGGATGTCAGTTTTAACAAGCTAGTTGGGAAAATTCCCGAAGTCATTAATGTAAAGCGTATGAGATACATCTACCTAACAGGTAACATGCTCAGTGGAAATGTACCAAAGTCAATACTGAAGGATGGAAGTAGCATTGATCTCTCTTACAACAACTTTAGTTGGCAAGGGCCTGAGCAACCTGCTTGTCAGGAAGACATGAACTTAAATGTGAATTTGTTCAGAAGCTCAATGATGAAGAATAAGTTAGAGGAATATGTGCCTTGCAAAAGTAACTTCAATTGTCCACGATATTCAAGTTGCTTACATGTCAATTGTGGTGGAAAGGATATACAAGTAAAAGATAATACAGGAAACACCCTCTATTTCGGAGATGGAGAAGTTGCAGGTGGTACTGCAACATATTTCTATAGCTCCAGTGATCAATGGGGATTTAGTAGCACTGGGGACTTTCTGGATGATTTCGAAGCCCAGAACATACGTTACACTGTATCTTTATCATCTTCAAATATGTCTGAATTGTACACAACAGCACGCATATCTCCAATTTCACTCACTTACTTCCATAATTGCATGGAAAATGGGAACTACACTGTGAATCTTCACTTTGCTGAAATACAGTTTTCAAATGATAACACATATAAAAGCCTTGGGAAGCGTATATTTGATATCTATGTTCAGGAAAAATTGATTAGAAAGGATTTTGATATAGAAAATGAGACACATGCTGCTGTAAAACCACTGGTAGTGCTTATATACAATGTCAGCATCACAAATAATGTTTTGGAGATTAGATTCTACTGGGCTGGGAAAGGAACAACTCGAATACCTGATTATGGAGTTTATGGTCCCCTTGTATCAGCATTGTCTGTTGCTTCTGACTCTAGAACTTGCTCAAACGATGGAAAGAAGGTTCCTGTTTCTGTAATAATTGCAAGTGTAGCTGGGGCTCTATGCTTCATTCTTCTTTTGTTTGGATTCATTTGGTGGAAAGGCTTTTTCAAAAGAAAATTGCGACGGAAAGGTACAAAAGGTGGAGATATTCAGTCAGGAACTTTTAGCTTAGAGCAGCTGAGAGCAGCCACTGATGACTTTTCTTCTGTTAACAAGATTGGAGAAGGCGGTTTCGGTCCTGTATACAAGGGTCAACTGCCTGATGGTACTGTTATAGCAGTTAAGCAACTATCATCAAAGTCAAGGCAAGGAAATCGCGAATTCTTAAATGAAATAGGCTTGATATCTTGTTTGCAACATCCCAACCTTGTAAAGCTTTATGGATACTGCACAGAAGGGGAACAACTTCTATTAGTATATGAGTACCTGGAAAATAATAGTCTTTCCCGTGCTTTATTTGGTAGTGAAACCAATCAGCTTAAGATAGACTGGCCAACAAGGTTTAGGATCTGCATTGGCATAGCAAAGGGTCTAGCATTTCTCCATGAAGAATCAAGATTCAAGATAGTTCACAGAGATATCAAGGCTTCTAATGTGTTACTTGATGGTGAACTAAATCCTAAGATATCTGACTTTGGATTGGCTAAGCTTCATGAAGATGAGAAGACACATATAACTACCCGAGTTGCCGGAACTATCGGATATATGGCACCAGAATATGCACTATGGGGATATCTTACATACAAAGCTGATGTTTACAGCTTTGGAGTCGTGGCCTTAGAAATTGTTAGTGGAAAAAGCAACAACAATTATTTACCAGATGATGAAAGCGTTTGCCTTTTGGATTGGGCATGCCAATTGCACAAAAAACAGAACTTAGTTAAACTGATTGATGAAAGCTTGGGGCCAGAGGACATTATAACAGAAGCAGAAATGGTGGTCAAAGTATCACTACTATGCACAAATGCATCACCATCACTCAGACCTACAATGTCTGAGGTTGTGAATATGCTTGAAGGTCATGCAGCTATTCCGGATATGGTTCCAGATCCAAGTTCCTGCAATGAGGATTTGAGGTTTAAAGCCTTAAGAGACTTCCATCAACATAAATCAAAACAGGGTTTCAGTGTAAACCAGACCCCAAATTCAGCAACACCACATACATTCAGCTCAATATCTGGTGATAATAATTACACAAGTTCTATTGAGGAATTAGCTCATTCTGAGATTTCCCCTTTATCAAGTTAA 3054 0.3913 MQLLNFFGFLLVTLCCFQLLTISESKLPKEEVEALKEITSTMGAVYWEFDNDSCDIIRVGLTREPPDESERSIVCDCSFENNTVCHVTKITLKRLSLPGALPPQLVKLPFLQVIDFAYNCLNGTIPKEWASMNLTSISLLVNRLSGEIPKHVGNITALTYLMLEANNFSGVVPPELGKLINLQTLVLSSNQLTGNLPSALAGLQNLTDFRISSNNFTGTIPDFIKNWQFLQRLEMHGSGLEGPIPSSISLLKNLLQLRISDIKSPSQVFPSLQSMTALTTLVLRNCNLSGEIPSYIWTLTNLATLDVSFNKLVGKIPEVINVKRMRYIYLTGNMLSGNVPKSILKDGSSIDLSYNNFSWQGPEQPACQEDMNLNVNLFRSSMMKNKLEEYVPCKSNFNCPRYSSCLHVNCGGKDIQVKDNTGNTLYFGDGEVAGGTATYFYSSSDQWGFSSTGDFLDDFEAQNIRYTVSLSSSNMSELYTTARISPISLTYFHNCMENGNYTVNLHFAEIQFSNDNTYKSLGKRIFDIYVQEKLIRKDFDIENETHAAVKPLVVLIYNVSITNNVLEIRFYWAGKGTTRIPDYGVYGPLVSALSVASDSRTCSNDGKKVPVSVIIASVAGALCFILLLFGFIWWKGFFKRKLRRKGTKGGDIQSGTFSLEQLRAATDDFSSVNKIGEGGFGPVYKGQLPDGTVIAVKQLSSKSRQGNREFLNEIGLISCLQHPNLVKLYGYCTEGEQLLLVYEYLENNSLSRALFGSETNQLKIDWPTRFRICIGIAKGLAFLHEESRFKIVHRDIKASNVLLDGELNPKISDFGLAKLHEDEKTHITTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKSNNNYLPDDESVCLLDWACQLHKKQNLVKLIDESLGPEDIITEAEMVVKVSLLCTNASPSLRPTMSEVVNMLEGHAAIPDMVPDPSSCNEDLRFKALRDFHQHKSKQGFSVNQTPNSATPHTFSSISGDNNYTSSIEELAHSEISPLSS* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0278 1017 MobiDBLite consensus disorder prediction 974 998 - -
Ahy20g0278 1017 Gene3D Phosphorylase Kinase; domain 1 639 744 - -
Ahy20g0278 1017 MobiDBLite consensus disorder prediction 973 998 - -
Ahy20g0278 1017 Pfam Leucine rich repeat 157 216 IPR001611 GO:0005515
Ahy20g0278 1017 CDD STKc_IRAK 675 942 - -
Ahy20g0278 1017 Pfam Malectin domain 405 593 IPR021720 -
Ahy20g0278 1017 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 71 985 - -
Ahy20g0278 1017 SUPERFAMILY Protein kinase-like (PK-like) 654 941 IPR011009 -
Ahy20g0278 1017 Gene3D Transferase(Phosphotransferase) domain 1 745 949 - -
Ahy20g0278 1017 SUPERFAMILY L domain-like 82 341 - -
Ahy20g0278 1017 Gene3D Ribonuclease Inhibitor 266 386 IPR032675 -
Ahy20g0278 1017 ProSiteProfiles Protein kinase domain profile. 669 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0278 1017 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 71 985 - -
Ahy20g0278 1017 Gene3D Ribonuclease Inhibitor 192 265 IPR032675 -
Ahy20g0278 1017 SMART serkin_6 669 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0278 1017 Pfam Protein tyrosine and serine/threonine kinase 672 940 IPR001245 GO:0004672|GO:0006468
Ahy20g0278 1017 Gene3D Ribonuclease Inhibitor 45 191 IPR032675 -
Ahy20g0278 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 791 803 IPR008271 GO:0004672|GO:0006468
Ahy20g0278 1017 Gene3D - 403 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0278 Ahy-Chr20 2944606 2951503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0278 4 835 Receptor kinase-like Gene Family AT1G29750 58.463 0.0 1017
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy20g0278 PK_Tyr_Ser-Thr 5.80E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0278 - - qlo:115990047 1380.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0278 20 2944606 2951503 Ahy20g0278 20 2944606 2951503 ECH
Ahy20g0278 20 2944606 2951503 Ahy10g0088 10 967974 974905 hybridization
Ahy13g4595 13 146319832 146326491 Ahy20g0278 20 2944606 2951503 PCT
Ahy3g4342 3 143426159 143433505 Ahy20g0278 20 2944606 2951503 PCT
Ahy20g0278 20 2944606 2951503 Ahy13g4595 13 146319832 146326491 PCT
Ahy20g0278 20 2944606 2951503 Ahy3g4342 3 143426159 143433505 PCT