Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy20g0278 | ATGCAACTTCTCAACTTCTTTGGCTTCTTACTTGTTACACTTTGTTGCTTCCAGTTGCTGACAATATCCGAATCAAAATTACCAAAAGAAGAAGTTGAAGCTCTCAAAGAAATTACCAGTACAATGGGGGCGGTCTATTGGGAGTTTGATAATGATTCCTGTGACATTATAAGGGTTGGACTAACTCGAGAACCTCCTGACGAATCGGAGAGAAGCATTGTTTGTGACTGCAGTTTTGAAAATAATACTGTCTGTCATGTTACTAAGATAACCCTCAAGCGCCTTAGTCTACCTGGAGCACTCCCACCTCAACTGGTCAAGCTACCTTTTCTTCAAGTGATAGATTTTGCATACAATTGTTTAAATGGCACAATTCCAAAGGAATGGGCTTCAATGAATTTAACTTCCATCTCTCTTCTTGTGAATCGCTTGTCAGGGGAAATTCCAAAGCATGTAGGAAATATTACTGCTCTCACATACCTGATGCTGGAAGCAAACAATTTTTCTGGAGTTGTTCCACCTGAACTTGGGAAGCTAATCAACTTGCAGACCTTGGTACTGTCATCAAATCAGTTGACCGGGAACTTACCATCGGCACTTGCTGGGCTGCAAAATTTAACCGACTTTAGGATAAGTAGTAACAACTTTACAGGAACCATACCTGATTTCATAAAGAACTGGCAATTTCTCCAAAGACTAGAAATGCATGGAAGTGGACTAGAAGGACCGATTCCATCGAGTATATCTCTATTGAAGAACTTACTTCAGTTAAGAATCAGTGATATAAAAAGTCCTAGCCAGGTTTTTCCTTCACTGCAGAGCATGACAGCACTAACTACATTGGTTTTAAGGAACTGTAACCTGTCTGGGGAGATACCTTCATACATATGGACCTTGACAAATCTAGCAACTTTGGATGTCAGTTTTAACAAGCTAGTTGGGAAAATTCCCGAAGTCATTAATGTAAAGCGTATGAGATACATCTACCTAACAGGTAACATGCTCAGTGGAAATGTACCAAAGTCAATACTGAAGGATGGAAGTAGCATTGATCTCTCTTACAACAACTTTAGTTGGCAAGGGCCTGAGCAACCTGCTTGTCAGGAAGACATGAACTTAAATGTGAATTTGTTCAGAAGCTCAATGATGAAGAATAAGTTAGAGGAATATGTGCCTTGCAAAAGTAACTTCAATTGTCCACGATATTCAAGTTGCTTACATGTCAATTGTGGTGGAAAGGATATACAAGTAAAAGATAATACAGGAAACACCCTCTATTTCGGAGATGGAGAAGTTGCAGGTGGTACTGCAACATATTTCTATAGCTCCAGTGATCAATGGGGATTTAGTAGCACTGGGGACTTTCTGGATGATTTCGAAGCCCAGAACATACGTTACACTGTATCTTTATCATCTTCAAATATGTCTGAATTGTACACAACAGCACGCATATCTCCAATTTCACTCACTTACTTCCATAATTGCATGGAAAATGGGAACTACACTGTGAATCTTCACTTTGCTGAAATACAGTTTTCAAATGATAACACATATAAAAGCCTTGGGAAGCGTATATTTGATATCTATGTTCAGGAAAAATTGATTAGAAAGGATTTTGATATAGAAAATGAGACACATGCTGCTGTAAAACCACTGGTAGTGCTTATATACAATGTCAGCATCACAAATAATGTTTTGGAGATTAGATTCTACTGGGCTGGGAAAGGAACAACTCGAATACCTGATTATGGAGTTTATGGTCCCCTTGTATCAGCATTGTCTGTTGCTTCTGACTCTAGAACTTGCTCAAACGATGGAAAGAAGGTTCCTGTTTCTGTAATAATTGCAAGTGTAGCTGGGGCTCTATGCTTCATTCTTCTTTTGTTTGGATTCATTTGGTGGAAAGGCTTTTTCAAAAGAAAATTGCGACGGAAAGGTACAAAAGGTGGAGATATTCAGTCAGGAACTTTTAGCTTAGAGCAGCTGAGAGCAGCCACTGATGACTTTTCTTCTGTTAACAAGATTGGAGAAGGCGGTTTCGGTCCTGTATACAAGGGTCAACTGCCTGATGGTACTGTTATAGCAGTTAAGCAACTATCATCAAAGTCAAGGCAAGGAAATCGCGAATTCTTAAATGAAATAGGCTTGATATCTTGTTTGCAACATCCCAACCTTGTAAAGCTTTATGGATACTGCACAGAAGGGGAACAACTTCTATTAGTATATGAGTACCTGGAAAATAATAGTCTTTCCCGTGCTTTATTTGGTAGTGAAACCAATCAGCTTAAGATAGACTGGCCAACAAGGTTTAGGATCTGCATTGGCATAGCAAAGGGTCTAGCATTTCTCCATGAAGAATCAAGATTCAAGATAGTTCACAGAGATATCAAGGCTTCTAATGTGTTACTTGATGGTGAACTAAATCCTAAGATATCTGACTTTGGATTGGCTAAGCTTCATGAAGATGAGAAGACACATATAACTACCCGAGTTGCCGGAACTATCGGATATATGGCACCAGAATATGCACTATGGGGATATCTTACATACAAAGCTGATGTTTACAGCTTTGGAGTCGTGGCCTTAGAAATTGTTAGTGGAAAAAGCAACAACAATTATTTACCAGATGATGAAAGCGTTTGCCTTTTGGATTGGGCATGCCAATTGCACAAAAAACAGAACTTAGTTAAACTGATTGATGAAAGCTTGGGGCCAGAGGACATTATAACAGAAGCAGAAATGGTGGTCAAAGTATCACTACTATGCACAAATGCATCACCATCACTCAGACCTACAATGTCTGAGGTTGTGAATATGCTTGAAGGTCATGCAGCTATTCCGGATATGGTTCCAGATCCAAGTTCCTGCAATGAGGATTTGAGGTTTAAAGCCTTAAGAGACTTCCATCAACATAAATCAAAACAGGGTTTCAGTGTAAACCAGACCCCAAATTCAGCAACACCACATACATTCAGCTCAATATCTGGTGATAATAATTACACAAGTTCTATTGAGGAATTAGCTCATTCTGAGATTTCCCCTTTATCAAGTTAA | 3054 | 0.3913 | MQLLNFFGFLLVTLCCFQLLTISESKLPKEEVEALKEITSTMGAVYWEFDNDSCDIIRVGLTREPPDESERSIVCDCSFENNTVCHVTKITLKRLSLPGALPPQLVKLPFLQVIDFAYNCLNGTIPKEWASMNLTSISLLVNRLSGEIPKHVGNITALTYLMLEANNFSGVVPPELGKLINLQTLVLSSNQLTGNLPSALAGLQNLTDFRISSNNFTGTIPDFIKNWQFLQRLEMHGSGLEGPIPSSISLLKNLLQLRISDIKSPSQVFPSLQSMTALTTLVLRNCNLSGEIPSYIWTLTNLATLDVSFNKLVGKIPEVINVKRMRYIYLTGNMLSGNVPKSILKDGSSIDLSYNNFSWQGPEQPACQEDMNLNVNLFRSSMMKNKLEEYVPCKSNFNCPRYSSCLHVNCGGKDIQVKDNTGNTLYFGDGEVAGGTATYFYSSSDQWGFSSTGDFLDDFEAQNIRYTVSLSSSNMSELYTTARISPISLTYFHNCMENGNYTVNLHFAEIQFSNDNTYKSLGKRIFDIYVQEKLIRKDFDIENETHAAVKPLVVLIYNVSITNNVLEIRFYWAGKGTTRIPDYGVYGPLVSALSVASDSRTCSNDGKKVPVSVIIASVAGALCFILLLFGFIWWKGFFKRKLRRKGTKGGDIQSGTFSLEQLRAATDDFSSVNKIGEGGFGPVYKGQLPDGTVIAVKQLSSKSRQGNREFLNEIGLISCLQHPNLVKLYGYCTEGEQLLLVYEYLENNSLSRALFGSETNQLKIDWPTRFRICIGIAKGLAFLHEESRFKIVHRDIKASNVLLDGELNPKISDFGLAKLHEDEKTHITTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKSNNNYLPDDESVCLLDWACQLHKKQNLVKLIDESLGPEDIITEAEMVVKVSLLCTNASPSLRPTMSEVVNMLEGHAAIPDMVPDPSSCNEDLRFKALRDFHQHKSKQGFSVNQTPNSATPHTFSSISGDNNYTSSIEELAHSEISPLSS* | 1018 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy20g0278 | 1017 | MobiDBLite | consensus disorder prediction | 974 | 998 | - | - | |
Ahy20g0278 | 1017 | Gene3D | Phosphorylase Kinase; domain 1 | 639 | 744 | - | - | |
Ahy20g0278 | 1017 | MobiDBLite | consensus disorder prediction | 973 | 998 | - | - | |
Ahy20g0278 | 1017 | Pfam | Leucine rich repeat | 157 | 216 | IPR001611 | GO:0005515 | |
Ahy20g0278 | 1017 | CDD | STKc_IRAK | 675 | 942 | - | - | |
Ahy20g0278 | 1017 | Pfam | Malectin domain | 405 | 593 | IPR021720 | - | |
Ahy20g0278 | 1017 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 71 | 985 | - | - | |
Ahy20g0278 | 1017 | SUPERFAMILY | Protein kinase-like (PK-like) | 654 | 941 | IPR011009 | - | |
Ahy20g0278 | 1017 | Gene3D | Transferase(Phosphotransferase) domain 1 | 745 | 949 | - | - | |
Ahy20g0278 | 1017 | SUPERFAMILY | L domain-like | 82 | 341 | - | - | |
Ahy20g0278 | 1017 | Gene3D | Ribonuclease Inhibitor | 266 | 386 | IPR032675 | - | |
Ahy20g0278 | 1017 | ProSiteProfiles | Protein kinase domain profile. | 669 | 946 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ahy20g0278 | 1017 | PANTHER | SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED | 71 | 985 | - | - | |
Ahy20g0278 | 1017 | Gene3D | Ribonuclease Inhibitor | 192 | 265 | IPR032675 | - | |
Ahy20g0278 | 1017 | SMART | serkin_6 | 669 | 946 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ahy20g0278 | 1017 | Pfam | Protein tyrosine and serine/threonine kinase | 672 | 940 | IPR001245 | GO:0004672|GO:0006468 | |
Ahy20g0278 | 1017 | Gene3D | Ribonuclease Inhibitor | 45 | 191 | IPR032675 | - | |
Ahy20g0278 | 1017 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 791 | 803 | IPR008271 | GO:0004672|GO:0006468 | |
Ahy20g0278 | 1017 | Gene3D | - | 403 | 600 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy20g0278 | Ahy-Chr20 | 2944606 | 2951503 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy20g0278 | 4 | 835 | Receptor kinase-like Gene Family | AT1G29750 | 58.463 | 0.0 | 1017 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Ahy20g0278 | PK_Tyr_Ser-Thr | 5.80E-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy20g0278 | - | - | qlo:115990047 | 1380.93 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy20g0278 | 20 | 2944606 | 2951503 | Ahy20g0278 | 20 | 2944606 | 2951503 | ECH | |
Ahy20g0278 | 20 | 2944606 | 2951503 | Ahy10g0088 | 10 | 967974 | 974905 | hybridization | |
Ahy13g4595 | 13 | 146319832 | 146326491 | Ahy20g0278 | 20 | 2944606 | 2951503 | PCT | |
Ahy3g4342 | 3 | 143426159 | 143433505 | Ahy20g0278 | 20 | 2944606 | 2951503 | PCT | |
Ahy20g0278 | 20 | 2944606 | 2951503 | Ahy13g4595 | 13 | 146319832 | 146326491 | PCT | |
Ahy20g0278 | 20 | 2944606 | 2951503 | Ahy3g4342 | 3 | 143426159 | 143433505 | PCT |