Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0258 TTGACATCTGAAGTGGAGCAAGATTGTGAATTTGATATTGGCCGTTTGAAGAGGTTCACCTTCCGTGAACTACAAATTGCTACTGGAAATTTCAGTCAAAAGAACATCCTTGGACAAGGAGGCTTTGGCATTGTCTACAAAGGATGCCTTACAAACAAAATGCTGGTGGCAATGAAGAGGCTAGATCCCAATTACACTGGAGAAATGCAATTTCAAACTAAAGTTGAGATGATCGGCTTGGCCGTGCATCGTAACCTTTTGCGTCTCTATGGATTTTGTATGACTCCAGATGAAAGGTTACTTGTTTATCCCTACATGCCTAATGGCAGTGTTGCTGATCGCTTGAGAGACACATGCCGAGAAAAGCCATCTCTGGACTGGAACAGGCGAATGCGAGTTGCTGTTGGCGCTGCACGCGGGCTTCTGTATTTACACGAGCAGTGCAACCCTAAAATAATCCACAGGGATGTTAAGGCTGCAAACATTTTGCTAGACGAAAGTTTTGAAGCTGTGGTGGGGGATTTTGGCCTTGCTAAGCTGTTGGATCAAAGGGATTCGCATGTCACCACCGCCGTGCGCGGTACAGTAGGCCACATTGCCCCGGAGTATCTCTCCACTGGACAGTCTTCTGAGAAAACAGATGTTTTTGGATTTGGCATATTACTTCTGGAGCTCATAACAGGACAAAAGGCACTAGATGCTGGGAATGGTCAAGTACAAAAGGGAATGATTCTTGATTGGGTTAAGACATTATTTGAGGAGAAGCGGCTAGAAGTGTTAGTTGATAGGGATCTAAGGGGATGCTTTGATCCAGTTGACCTAGAAATGGCAGTGGAGCTGTCTTTACAGTGCACTCAGTCACTTCCGAGTCTGCGGCCGAAGATGTCGGAAGTCTTGAAGATTCTAGAAGGCCTGGTTGGGCATTCGGCGCAGCCGGAGGAGCCGCAAGGAGGGTCTAACTTATATGAAGAAAGAGCATGCAGTTTCTCCCAAAATTATAGTGATGTTCATGAAGAACCTTCCTTTGTTATTGAAGCCATTGAGCTTTCTGGTCCTCGGTGA 1062 0.4595 LTSEVEQDCEFDIGRLKRFTFRELQIATGNFSQKNILGQGGFGIVYKGCLTNKMLVAMKRLDPNYTGEMQFQTKVEMIGLAVHRNLLRLYGFCMTPDERLLVYPYMPNGSVADRLRDTCREKPSLDWNRRMRVAVGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDAGNGQVQKGMILDWVKTLFEEKRLEVLVDRDLRGCFDPVDLEMAVELSLQCTQSLPSLRPKMSEVLKILEGLVGHSAQPEEPQGGSNLYEERACSFSQNYSDVHEEPSFVIEAIELSGPR* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0258 353 SUPERFAMILY Protein kinase-like (PK-like) 16 325 IPR011009 -
Ahy20g0258 353 ProSitePatterns Protein kinases ATP-binding region signature. 37 59 IPR017441 GO:0005524
Ahy20g0258 353 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 2 353 - -
Ahy20g0258 353 Pfam Protein kinase domain 32 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0258 353 ProSiteProfiles Protein kinase domain profile. 31 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0258 353 SMART serkin_6 31 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0258 353 Gene3D Transferase(Phosphotransferase) domain 1 106 310 - -
Ahy20g0258 353 Gene3D Phosphorylase Kinase; domain 1 1 105 - -
Ahy20g0258 353 PIRSF ILK 14 315 - -
Ahy20g0258 353 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 2 353 - -
Ahy20g0258 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0258 Ahy-Chr20 2559424 2560931 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0258 3 353 Receptor kinase-like Gene Family AT5G45780 76.136 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Ahy20g0258 Pkinase 7.30E-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0258 - - ahf:112783526 699.893