Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0241 ATGGGTTTCGAAGAACAGGAAGGTGTGTATGACACGAGGATTGAAGCTGAAGAAACTGTAGCTGAATGTGAAGGCAAGGCAGATCCGATTTTTCATGAATTGAACGGGGTGGAAGGTCTCCAAGTAGAAGATATCCTTCAAATGGAGTTTTGTACTCCCGAAGAAGCACGGTGTTTTTATAACAGCTATAGCCGATTGAAGGGATTTGCCACGAGGCAGGGGAAAAAGGTACCGAACAAGGTAGGAGAGATTGTTAGGTATACGTTCGTGTGCAACAGGCAAGGGTTTCGTGATAAAAAATGGTTGGAGATGGCTGATCGAAAGAGGGAACACAAGGTAGTGACTCACTGTGGCTGCTTAGCTGAGATGAGAATTAAGCGAAAAGATGGCAGTGGGAAGTGGTATGTGTCACGGTTTTTGGACAACCATAACCATGAGCTCGTAGCTGGGAAGTATGTTGACTATTTGAGGTCGCATAGGGGGCTATCTGATGTTGAAATTGCTCATCTGACTAGCTTGAGGGAGGTGGGTATAAGCATACCAAAAATATATCAGTCATTTGCCGCACAGGTTGGCGGTTTTAACCTCGTCAGGTTCACTAAGCAAGACATGTATAACGAGGTTAGAAAGCAAAGAAGCTTGCAGAATGGGGATGTTAATGCAGCAGTTCGCTATTTGGAAGGTGTAGCTCGTGTGGATAACAGGATGTACTGGAGGTATACGCTAGGGCAGGACAACAATATGTGCGACCTGTTCTGGAGCGATGGCCGTAGTCAGCTGGATTATGGAATTTTCGGCGATGTTCTTGCATTTGATGCCACATATGGTCGAAACAAGTACAATCTCCTTGTGGTTGTGTTTTCAGGAGTGAACCACCACAATCAAACCTGTATTTTTGGGGCGGCAATGGTATCGTGCGAAACACAAGAGTCCTACATTTGGGTATTAGAAAAGTTTCTGGAATGCATGGAAGGAAAACCCCCAAATGCGGTCATCACGGATGGAGATCCAGCGATGCGCATAGCTATTCACGAGGTCTTTCCCGAGGCCCACCACAGGTTATGTGCATGGCATCTTCTCCGGAACGCCACGTCAAACATATGCGACCCACGCTTCACCCATCTTTTTAGGCAATGCATGCTTGCTGACTTGGAGGTTCATGAGTTTGAGGCACATTGGGATGCTATGTTGGATGAATGTGGGGTAAGGGAAGTCGATTGGGTTAAGGACCTCTACCGGCGAAAGCATGCTTGGGCGACTGCGTACATCAGAGGCCGCTTTTTTGCTGGTATACGCACAACGTCTCGCTGCGAGTCACTTCACGCGAAGCTTGGTAGGTTTGTGGAGAGTAGGTATGGCATACTTGAATTTGTGACAAACTTCCAAAGGTGCATAGATTTTTTGCATGATAATGAGGATGAGCTTGATTTTCGTTCCTCGTACGGGACCCCAGTGTTACAAACTGAATTTGTTGAGCTTGAGAAGTCGGGTTGGACAAAGTACACCCGTAAAATGTTCTTCAGATATCGGGAAACTCTTAGGAGATGTGTTCGAGTTAAGATTTGCCACTGCGATGTTAGTGATAGCGGAGAAGTGTACATCCTTCAAAAATATAGAAGGCCCGAGCAAACCTGGGAGGTTAGGTGGGAGAGGGCGAGTAATAAATTCAGTTGCGATTGCATGCGAATGGAATCATTTGGTCTGCCGTGTGTGCACATTGTAGCTGTTTTGGTCGGGTAG 1740 0.4644 MGFEEQEGVYDTRIEAEETVAECEGKADPIFHELNGVEGLQVEDILQMEFCTPEEARCFYNSYSRLKGFATRQGKKVPNKVGEIVRYTFVCNRQGFRDKKWLEMADRKREHKVVTHCGCLAEMRIKRKDGSGKWYVSRFLDNHNHELVAGKYVDYLRSHRGLSDVEIAHLTSLREVGISIPKIYQSFAAQVGGFNLVRFTKQDMYNEVRKQRSLQNGDVNAAVRYLEGVARVDNRMYWRYTLGQDNNMCDLFWSDGRSQLDYGIFGDVLAFDATYGRNKYNLLVVVFSGVNHHNQTCIFGAAMVSCETQESYIWVLEKFLECMEGKPPNAVITDGDPAMRIAIHEVFPEAHHRLCAWHLLRNATSNICDPRFTHLFRQCMLADLEVHEFEAHWDAMLDECGVREVDWVKDLYRRKHAWATAYIRGRFFAGIRTTSRCESLHAKLGRFVESRYGILEFVTNFQRCIDFLHDNEDELDFRSSYGTPVLQTEFVELEKSGWTKYTRKMFFRYRETLRRCVRVKICHCDVSDSGEVYILQKYRRPEQTWEVRWERASNKFSCDCMRMESFGLPCVHIVAVLVG* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0241 579 PANTHER OS02G0262500 PROTEIN 43 575 - -
Ahy20g0241 579 ProSiteProfiles Zinc finger SWIM-type profile. 545 577 IPR007527 GO:0008270
Ahy20g0241 579 Pfam FAR1 DNA-binding domain 59 148 IPR004330 -
Ahy20g0241 579 Pfam MULE transposase domain 268 362 IPR018289 -
Ahy20g0241 579 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 43 575 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0241 Ahy-Chr20 2153284 2157961 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g0241 MULE 1.20E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0241 - - aip:107620408 918.687