Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0239 ATGGTGGTTGAAGATACCCAGAAATCAAGCATCACTGACGACCAAATCACCGCAAACCCTAACAACGAAAACGAAGACCTTGAGGAGGGAGAGATCCTCGACGACGACGACTCCTCCGCCACCTCCAGGCCACCCTCCTCCTCCGGCGCCCTCGCCCGTAACCCCCACCCTCTTGAGAACTCTTGGACCTTCTGGTTCGATAACCCCTCCGCTAAGTCCAAGCAAGCAGCTTGGGGCAGCTCCATCAGACCCATTTACACCTTCGCCACCGTTGAAGAATTCTGGAGCATTTACAATAACATACATCACCCTAGCAAGTTGGCTGTTGGAGCAGACTTTCACTGTTTCAAGCACAAGATTGAGCCTAAATGGGAGGACCCTATCTGCGCTAATGGGGGAAAATGGACTATGACATTTCCTAGGGGGAAATCTGATACCAGTTGGTTATACACGTTGTTGGGGATGATTGGAGAACAATTTGATCATGGTGATGAGATTTGCGGAGCTGTCGTAAATGTCAGGAATAGGCAGGAGAAAATTGCTCTTTGGACTAAGAATGCTGCAAATGAAGCTGCCCAGGTGAGCATTGGAAAACAGTGGAAGGAGTTTCTTGATTATAATGATACCATCGGCTTTATATTCCACGAGGATGCAAAGAAGCATGACAGAGCCGCTAAAAACAAATACGTCATATGA 696 0.4813 MVVEDTQKSSITDDQITANPNNENEDLEEGEILDDDDSSATSRPPSSSGALARNPHPLENSWTFWFDNPSAKSKQAAWGSSIRPIYTFATVEEFWSIYNNIHHPSKLAVGADFHCFKHKIEPKWEDPICANGGKWTMTFPRGKSDTSWLYTLLGMIGEQFDHGDEICGAVVNVRNRQEKIALWTKNAANEAAQVSIGKQWKEFLDYNDTIGFIFHEDAKKHDRAAKNKYVI* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0239 231 Pfam Eukaryotic initiation factor 4E 57 208 IPR001040 GO:0003723|GO:0003743|GO:0006413
Ahy20g0239 231 SUPERFAMILY eIF4e-like 52 226 IPR023398 -
Ahy20g0239 231 Gene3D RNA Cap, Translation Initiation Factor Eif4e 48 231 IPR023398 -
Ahy20g0239 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 1 231 IPR001040 GO:0003723|GO:0003743|GO:0006413
Ahy20g0239 231 MobiDBLite consensus disorder prediction 1 23 - -
Ahy20g0239 231 MobiDBLite consensus disorder prediction 1 55 - -
Ahy20g0239 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 1 231 - -
Ahy20g0239 231 ProSitePatterns Eukaryotic initiation factor 4E signature. 112 135 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0239 Ahy-Chr20 2119729 2121511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0239 1 230 Eukaryotic Initiation Factors Gene Family AT4G18040 63.821 1.37e-112 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0239 K03259 - gmx:100793288 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0239 20 2119729 2121511 Ahy20g0239 20 2119729 2121511 ECH
Ahy20g0239 20 2119729 2121511 Ahy10g0069 10 743351 745124 hybridization