Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0236 ATGAAAACTGAAGAAGCATCGTCTTCTTCTGCAACACCGAACGGCGATGGAGGACGAAGACGGAAGAAGAACAAAGCGAACCAGAAGGTTCCATTCTACAAGCTTTTCTCTTTCGCGGATCGCCTCGACGTTATATTGATGATTGTTGGAACACTCTCTGCAATCGGCAATGGCATGTCTCAGCCTCTAATGACTCTTATCTTCGGCAAGCTTATCAACACTTTCGGTTCCGGTGATCCATCTCATATCGTCAAGGAAGTTTCAAAGGTTGCAATACTGTTTGTTTACCTGGCTATTTGGTCTGGAATTACATCGTTTCTTCAGGTATCTTGTTGGATGGTGACAGGAGAAAGACAAGCAGCTAGGATCCGTGGTTTGTACTTGAAAACTATATTGAAGCAAGACATTGCCTTCTTTGACACTGAAACAACAACCGGAGAGGTCATTGGTAGAATGTCTGGCGACACTATTCTCATTCAAGATGCCATGGGAGAAAAGGTTGGGAAGTTTATTCAACTTGGTTCAACCTTTGTTGGTGGCTTTGTGATTGCCTTCATAAAAGGATGGAGGCTCGCTGTAGTTCTTCTTGCATGTATACCATGTGTGGTGGTTGCTGGTGGAACTATGGCCATGATGATGGCTAAAATGGCTAGCCGAGGACAGATTGCGTATGCAGAAGCAGGGAATGTTGTTGAACAAACAGTTGGAGCCATTAGAACTGTTGCATCTTTTACTGGGGAGAAGAAAGCAATAGAAAAGTACAATATTAAGTTAAAAGTCGCATATACTACAATGGTTCAACAAGGAATGGCATCAGGTATAGGACTTGGAGCACTTCTGTTCATTATCTTCAGCACCTATGGGCTTGCCATGTGGTATGGTTCCAAGCTCATCATCGAGAGGGGATACAATGGTGGAACAGTAATCAATGTAATCATTGCTCTTATGACCGGTGGAATGTCACTTGGTCAGACATCTCCTTGCGTAAATGCATTTGCAGCAGGCAGAGCAGCAGCATTTAAGATGTTTGAGACAATAGAAAGGAAACCAAAAATTGATGCATATGACACAAACGGTGTTGTCTTGGAAGACATTAAGGGAGATATTGAACTCAAAGATGTTTACTTCAGATATCCTGCTAGGCCAGATGTGCAGATCTTTGCTGGATTCTCATTATGTGTTCCAAATGGCACAACTGCTGCTTTGGTTGGTCAAAGTGGCAGTGGCAAATCAACTGTGATAAGCTTATTGGAAAGATTCTATGATCCTGATGCTGGAGAAGTACTCATAGATGGGGTCAACTTAAAGGATTTCCAACTTAGATGGATAAGAGAACAAATTGGTTTGGTTAGTCAAGAACCTACTCTTTTTACAGCTAGTATCAAAGACAACATTGCTTATGGAAAAGAAGGTGCAACTGACGAGGAAATAATGACAGCAATAACACTTGCCAATGCCAAAAAATTCATTGACAAGTTGCCGCAGGGAATTGACACAATGGCAGGGGAGCATGGCACGCAACTTTCTGGTGGCCAAAAGCAAAGAATTGCCATAGCAAGGGCAATTTTGAAGAATCCTAAAATTCTGCTTTTGGATGAAGCCACAAGTGCATTGGATGCTGAATCTGAACGTGTTGTTCAAGAAGCCTTAGAGAAAGCCATGTCAAATAGGACTACCGTAGTTGTTGCACATCGTTTAACAACTATTAGGAATGCTGACACTATTGCAGTGGTTCAACAGGGGAAAATCGTAGAACAAGGGTCTCATGATGAGTTAATCAAGGACCCTGAGGGTCCTTATTCTCAGCTTATTCGCTTACAAGAAGGACAAAAAAATGAGGATGAAGATAGCAGAATTTTTGAAGCAGATTTAGATAGAGCTTCCTTCCACAAACCATCGAATTTGAGATCATTAAGCCGAGGTTCATCAGGGAGCAGGCGTTCTCATTCAAATAACATTGTTGCCCCTTTAACTTCACAAAGTTCAGTACAAGAAATAGGTGATGGCGACGTTGAAACTGGTGAACGAAGTGATAAGAAGCGCAAAAGCGTTTCAATGAAACGTTTGGCCTATTTGAACAAGCCTGAACTTCCTGTGTTACTGCTTGGAGGCATCGCTGCAGCAGTGCATGGAGTTATATTCCCCATATTTGGCCTATTGCTTTCATCAGCCATCAAAATGTTCTTTGAGCCTCCACATCAGCTAAGGAAGGATTCTAGGTTCTGGTCACTTTTGTATGTTGGTTTGGGTTTGCTCACTCTCATGGCTATACCAGTGCAGAATTACTTCTTTGGGATTGCTGGTGGAAAACTCATTGAAAGGATTCGCTCGTTGACATTCCAGAAGGTTGTGCACCAAGAAATCAGTTGGTTTGATCATCCTGAAAACGCAAGTGGTGCAATCGGCGCAAGGCTATCTACTGATGCTTCAACAGTGAGGAGTCTTGTCGGTGACACATTGGCCCTCATTGTGCAAAACATATCCACAATCATAGCAGGCCTAGTTATAGCTTTCACTGCTAATTGGATTCTAGCTTTTGTAGTCCTGGCTGTGTCACCATGTGTTCTCATCCAAGGATTCCTTCAGATGAAATTTCTAAGAGGGTTCAGTGCTGATGCCAAGTTGATGTATGAAGAGGCAAGTCAAGTGGCAAATGATGCTGTTGGTAGCATTAGAACCGTTGCATCGTTTTGTGCAGAACCAAAGGTGATGGATATGTATAGGAAGAAGTGTATAGGACCAGAAAAACAAGGTGTAAGGTTGGGGCTTGTTAGCGGAGCAGGATTTGGTTTCTCATTTGTTGCTCTATACTGCACAAATGCCTTTTGTTTCTACATAGGATCTGTTCTTGTGCAGCATGGGGAAGCAACATTTTCAGAGGTTTTCAGGGTTTTCTTTTGCCTCACAATGACAGCAATCGGCGTTTCCCAGACTAGTGCCTTGGCACCAGACACAAATAAGGCCAAGGATTCCGCAGCTTCAATATTTGAAATCCTTGATAGCAAACCAATGATTGACTCCAGCAGCAATGAGGGAATGACACTAGACAATGTTGTTGGTGCCATTGAACTTCAAAATGTCAGCTTTAGTTACCCAACAAGGCCTGACATCCAAATTTTCAAAGATTTATGTCTAAGCATCCCTGCTGGGAAGACTGTTGCATTGGTTGGAGAAAGTGGAAGTGGAAAATCAACAGTGATCAGCCTCTTAGAAAGATTCTACAACCCTGATTCCGGACAGATACTCCTTGATGAAGTGGACATCACTAAGTTCAGAATAAGCTGGTTGAGGCAACAAATGGGTTTGGTTGGTCAAGAGCCAATTCTCTTCAATGAAAGCATCCGTGACAACATAGCATATGGCAAAGAAGGATGTGCCACTGAGGAAGAGATCATTGCAGCAGCAGAAGCAGCCAATGCACACAATTTTATAAGCTCTCTTCCGAAAGGATATGACACTACTGTTGGTGAAAGAGGGACACAACTCTCTGGTGGACAGAAGCAGCGTATTGCCATTGCAAGAGCCATGCTTAAACAGCCTAAGATACTATTGCTCGATGAAGCAACAAGTGCACTTGATGCTGAATCAGAGCGTGTGGTTCAAGAGGCTCTAGATAGAGTGAGTGTGGACAGAACTACTGTGGTGGTAGCTCATAGGCTTTCAACAATCAAAGGTGCTGATATCATTGCTGTAGTGAAGAATGGAGTGATTGCTGAGAAGGGAAGACATGATTCTTTGATGAAGATTGAGGGTGGCACTTATGCTTCCTTGGTAGCTCTACATATGAGTGCATCCTAA 3798 0.4286 MKTEEASSSSATPNGDGGRRRKKNKANQKVPFYKLFSFADRLDVILMIVGTLSAIGNGMSQPLMTLIFGKLINTFGSGDPSHIVKEVSKVAILFVYLAIWSGITSFLQVSCWMVTGERQAARIRGLYLKTILKQDIAFFDTETTTGEVIGRMSGDTILIQDAMGEKVGKFIQLGSTFVGGFVIAFIKGWRLAVVLLACIPCVVVAGGTMAMMMAKMASRGQIAYAEAGNVVEQTVGAIRTVASFTGEKKAIEKYNIKLKVAYTTMVQQGMASGIGLGALLFIIFSTYGLAMWYGSKLIIERGYNGGTVINVIIALMTGGMSLGQTSPCVNAFAAGRAAAFKMFETIERKPKIDAYDTNGVVLEDIKGDIELKDVYFRYPARPDVQIFAGFSLCVPNGTTAALVGQSGSGKSTVISLLERFYDPDAGEVLIDGVNLKDFQLRWIREQIGLVSQEPTLFTASIKDNIAYGKEGATDEEIMTAITLANAKKFIDKLPQGIDTMAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERVVQEALEKAMSNRTTVVVAHRLTTIRNADTIAVVQQGKIVEQGSHDELIKDPEGPYSQLIRLQEGQKNEDEDSRIFEADLDRASFHKPSNLRSLSRGSSGSRRSHSNNIVAPLTSQSSVQEIGDGDVETGERSDKKRKSVSMKRLAYLNKPELPVLLLGGIAAAVHGVIFPIFGLLLSSAIKMFFEPPHQLRKDSRFWSLLYVGLGLLTLMAIPVQNYFFGIAGGKLIERIRSLTFQKVVHQEISWFDHPENASGAIGARLSTDASTVRSLVGDTLALIVQNISTIIAGLVIAFTANWILAFVVLAVSPCVLIQGFLQMKFLRGFSADAKLMYEEASQVANDAVGSIRTVASFCAEPKVMDMYRKKCIGPEKQGVRLGLVSGAGFGFSFVALYCTNAFCFYIGSVLVQHGEATFSEVFRVFFCLTMTAIGVSQTSALAPDTNKAKDSAASIFEILDSKPMIDSSSNEGMTLDNVVGAIELQNVSFSYPTRPDIQIFKDLCLSIPAGKTVALVGESGSGKSTVISLLERFYNPDSGQILLDEVDITKFRISWLRQQMGLVGQEPILFNESIRDNIAYGKEGCATEEEIIAAAEAANAHNFISSLPKGYDTTVGERGTQLSGGQKQRIAIARAMLKQPKILLLDEATSALDAESERVVQEALDRVSVDRTTVVVAHRLSTIKGADIIAVVKNGVIAEKGRHDSLMKIEGGTYASLVALHMSAS* 1266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0236 1265 MobiDBLite consensus disorder prediction 631 659 - -
Ahy20g0236 1265 CDD ABC_MTABC3_MDL1_MDL2 369 607 - -
Ahy20g0236 1265 Gene3D ABC transporter type 1, transmembrane domain 94 996 IPR036640 GO:0005524|GO:0016021
Ahy20g0236 1265 ProSitePatterns ABC transporters family signature. 508 522 IPR017871 GO:0005524
Ahy20g0236 1265 Gene3D - 367 623 IPR027417 -
Ahy20g0236 1265 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 48 334 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy20g0236 1265 Pfam ABC transporter transmembrane region 47 319 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy20g0236 1265 Pfam ABC transporter transmembrane region 700 972 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy20g0236 1265 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 24 1262 - -
Ahy20g0236 1265 CDD ABC_6TM_Pgp_ABCB1_D1_like 47 330 - -
Ahy20g0236 1265 MobiDBLite consensus disorder prediction 1 15 - -
Ahy20g0236 1265 SUPERFAMILY ABC transporter transmembrane region 682 1006 IPR036640 GO:0005524|GO:0016021
Ahy20g0236 1265 Pfam ABC transporter 1041 1190 IPR003439 GO:0005524
Ahy20g0236 1265 SUPERFAMILY ABC transporter transmembrane region 34 353 IPR036640 GO:0005524|GO:0016021
Ahy20g0236 1265 CDD ABC_6TM_Pgp_ABCB1_D2_like 690 1005 - -
Ahy20g0236 1265 Pfam ABC transporter 390 536 IPR003439 GO:0005524
Ahy20g0236 1265 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1022 1259 IPR003439 GO:0005524
Ahy20g0236 1265 ProSitePatterns ABC transporters family signature. 1162 1176 IPR017871 GO:0005524
Ahy20g0236 1265 Gene3D - 1012 1264 IPR027417 -
Ahy20g0236 1265 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 24 1262 IPR039421 -
Ahy20g0236 1265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 607 IPR027417 -
Ahy20g0236 1265 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 701 987 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy20g0236 1265 MobiDBLite consensus disorder prediction 1 24 - -
Ahy20g0236 1265 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 369 605 IPR003439 GO:0005524
Ahy20g0236 1265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1011 1260 IPR027417 -
Ahy20g0236 1265 CDD ABC_MTABC3_MDL1_MDL2 1022 1258 - -
Ahy20g0236 1265 SMART AAA_5 1049 1242 IPR003593 -
Ahy20g0236 1265 SMART AAA_5 396 582 IPR003593 -
Ahy20g0236 1265 MobiDBLite consensus disorder prediction 632 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0236 Ahy-Chr20 2099568 2105935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0236 30 1261 Calmodulin-binding Proteins AT2G36910 45.957 0.0 1069
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0236 K05658 - gmx:100801771 1914.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0236 20 2099568 2105935 Ahy20g0236 20 2099568 2105935 ECH