Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0235 ATGGTCATGGAGAAAAGAGAGAGGCCATTGAAAATGGCAAGGTCGTTTACTAGTTATATGATATTTGATTTCACATTTCATGGTGTCTTCCTACTTCCTCTTCTTTTATTAGTACTTCAGTTTTCATCTCAGCTTGCAAACTGTGGCAGCATAGTTAAGTATCTTCCAGGGTTCCAAGGACCCCTTCCTTTTCTGCTTGAAACTGGATATATTGGGGTGGGTGAAGATGATGATGTGCAGAGTTTCTACTATTTCATTGAGTCAGAGAACAATCCTAAGGTGGATCCTCTCATGCTATGGCTCACTGGTGGTCCTGGCTGCTCTGCTTTCTCTGGCCTTGTCTTTGAAATTGGTCCACTTACATTTAAAAATGAAGAATATAATGGGAGTCTGCCTAATTTGTATTTGAAGCCACACTCTTGGACAAAGGTAAGCAACATTATATTTGTAGATTTGCCTGTTTTAACAGGCTTTTCTTATGCCAGAACAGATTCTGCTGCTCAACGAAGCGATTGTTTACTGGTTAATCAAACTCATCAATTTCTTAGAAAGTGGCTGATTGAACATCCAAAATTTCTATCACATGAAATTTACATTGGTGGTGATTCATACTCTGGTATTCCTATCCCAGCAGTTGTTCAAGAAATTTCACAAGGAAATGAAGAAGGGGTCCAACCATGGATTAATCTCCAGGGATACCTGCTGGGAAATCCTGTAACAACTCGAACGGAAAAGAATTATAAAATCCCATTTGCTCATGGAATGGCACTTATTTCTGATGAACTATACAATTCACTGCAAAAAAATTGTAAAGGAGACTACATAAATATAGACACAGAAAATGTGTTATGTTCAAGAGACATTGTTTCCTTCAACAAGGTTATTGAAGGACTTAATTCAGCACAGATTTTGGATCCGTTATGCGAGTACATCACTTCGCCTAAGCCGGAGAAATTTTCTTGGAGGAGAGCTCTAACTGAGAACAAGTATTCCAGGAGTTTCCTTGCTCCTCCCCTGACATTGCCACCATTAAGCTGCCGTAGTTATGCATACTTCCTTTGCACTTATTGGGCTAATGATGATAGTGTTCACAATGCTCTCCACATAAGAAAGGGAAGCATCGGCGAATGGCATCGCTGTACATGGAACATACCTCACAAGCTGGAAATCTATAACAGCTTTGAGTATCATGTAAATCTCAGTCAAAAAGGCTATCGTTCACTGATATACAGTGGTGATCATGACATCACAGTTCCTTTCTTGTCAACTCAAGCATGGATAAGATCCTTAAACTACTCCATTGTAGAAGACTGGAGACAATGGCAAACAAATGGACAAGTAGCAGGATACACAAGGACTTACTCTAATAGGATGACATTTGCAACTGTGAAGGGTGGTGGCCACACAGCACCAGAGTTCAAGCCTGAAGAATGCTTTGCTATGTACAGCAGGTGGATCTCTAAGAGGCCTTTGTAG 1476 0.4024 MVMEKRERPLKMARSFTSYMIFDFTFHGVFLLPLLLLVLQFSSQLANCGSIVKYLPGFQGPLPFLLETGYIGVGEDDDVQSFYYFIESENNPKVDPLMLWLTGGPGCSAFSGLVFEIGPLTFKNEEYNGSLPNLYLKPHSWTKVSNIIFVDLPVLTGFSYARTDSAAQRSDCLLVNQTHQFLRKWLIEHPKFLSHEIYIGGDSYSGIPIPAVVQEISQGNEEGVQPWINLQGYLLGNPVTTRTEKNYKIPFAHGMALISDELYNSLQKNCKGDYINIDTENVLCSRDIVSFNKVIEGLNSAQILDPLCEYITSPKPEKFSWRRALTENKYSRSFLAPPLTLPPLSCRSYAYFLCTYWANDDSVHNALHIRKGSIGEWHRCTWNIPHKLEIYNSFEYHVNLSQKGYRSLIYSGDHDITVPFLSTQAWIRSLNYSIVEDWRQWQTNGQVAGYTRTYSNRMTFATVKGGGHTAPEFKPEECFAMYSRWISKRPL* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0235 491 SUPERFAMILY alpha/beta-Hydrolases 52 490 IPR029058 -
Ahy20g0235 491 Gene3D - 346 491 - -
Ahy20g0235 491 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 29 490 IPR001563 GO:0004185|GO:0006508
Ahy20g0235 491 Pfam Serine carboxypeptidase 56 487 IPR001563 GO:0004185|GO:0006508
Ahy20g0235 491 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 29 490 - -
Ahy20g0235 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 185 210 IPR001563 GO:0004185|GO:0006508
Ahy20g0235 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 149 IPR001563 GO:0004185|GO:0006508
Ahy20g0235 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 150 160 IPR001563 GO:0004185|GO:0006508
Ahy20g0235 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 458 471 IPR001563 GO:0004185|GO:0006508
Ahy20g0235 491 Gene3D alpha/beta hydrolase 48 318 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0235 Ahy-Chr20 2091501 2094937 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0235 46 75 Calmodulin-binding Proteins AT2G22960 73.333 2.67e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0235 K16296 - gmx:100792006 742.651