Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0213 ATGGTAGATAGTGGTTTTGGTGGTGGTCGTGATTCTGGGATGAGCTTGGAGACTGTGAATTCTGCACAGAGAACTTCCATGAGCAGCGACAGCATCTGTAGCACCAGCTTCAGCCGTCTCTCCTTCGACCTCCTACCTACCTCGCCGGAGAGCCTCTCCATCAAGCCACACCGCTCCTCTGACTTTGCATACTCCGCCATCCGCTCCGCCACTTTCCGCCGCAAGTCCGGTCTCACTTTTCGCGACTTTCACCTCCTCCGCCGTATAGGCGCCGGTGACATCGGCACCGTCTACCTCTGCCGCCTCCGTGACTCAGCCGCCGCCTCCGATGAGTTCCCCTCCGGTGAGTACGACAACTCCAACAGCAACGGCAACGATGAACCAGCCGGGTGCTTCTACGCGATGAAGGTTGTGGACAAGGAGGCGGTGGCGATGAAGAACAAGTCGCAGAGGGCCGAAATGGAGAGGAAGATCCTAAAGATGTTGGACCATCCGTTCCTTCCTACCCTGTATGCGGAGTTTGAAGCGTCTCATTTCTCTTGCATTGTGATGGAGTTTTGTCCCGGCGGCGACCTCCACTCCCTCCGCCACAAGCAACCACACAAACGGTTCCCTCTCTCCTCCGCAAGGTTTTACGCTGCGGAGGTACTGGTTGCTTTGGAATACCTGCACATGCTTGGAATCATCTACAGGGATCTAAAGCCCGAAAACGTGTTGGTCAGATCAGACGGTCACATCATGCTCTCCGATTTCGATCTCTCCCTTTGTTCCGATGCAATCCCAGCCGTTGAATCCTCTGACTATTCCCCTGACCCAGAAAACACATTCCCGCTACCATACACAAACACACGCACCTACTCAGCAACGCCACTATTCTCCTGTCTCTCTAACCGCGTCTTCCGATCCAGGAAAGTTCAGACGCTCAACCCCAAGCGCCTCTTCGTGGCCGAGCCTGTCGGAGCACGCTCCTGCTCCTTCGTCGGAACTCACGAGTACGTGTCGCCAGAGGTTGCCTCCGGGAATTCCCACGGAAATGCCGTTGACTGGTGGTCTTTCGGGATATTCGTGTACGAGCTCGTGTATGGTCGCACACCGTTTGCTGGTCCATCCAACGATGTGACACTGCGCAACATCATAAAGAAGCCATTGGCGTTTCCTACAGCCACGTCCTGCAGCACGCTTGAGCACCACGTCCGGGACCTCATAAGTGGCTTGCTCCACAAGGACCCCACTCGAAGACTCGGGTCCAGGCGGGGCGCTGCTGACGTCAAAAAGCACCCCTTCTTCAGCGGGATCAACCTGGCGCTCATCAGGATGCTCACTCCGCCGGAGATTCCCTATCTCAGGGGGCAAAAAACGATGCCTTCTTCGTTGTTCTCTGCTACTACTAAAGGCCACAACACCATAATGAGTAATAAGCAGCTGCAAACAACGGCGTCGTTTGATTGCTTTTGA 1455 0.5526 MVDSGFGGGRDSGMSLETVNSAQRTSMSSDSICSTSFSRLSFDLLPTSPESLSIKPHRSSDFAYSAIRSATFRRKSGLTFRDFHLLRRIGAGDIGTVYLCRLRDSAAASDEFPSGEYDNSNSNGNDEPAGCFYAMKVVDKEAVAMKNKSQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCPGGDLHSLRHKQPHKRFPLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESSDYSPDPENTFPLPYTNTRTYSATPLFSCLSNRVFRSRKVQTLNPKRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFVYELVYGRTPFAGPSNDVTLRNIIKKPLAFPTATSCSTLEHHVRDLISGLLHKDPTRRLGSRRGAADVKKHPFFSGINLALIRMLTPPEIPYLRGQKTMPSSLFSATTKGHNTIMSNKQLQTTASFDCF* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0213 484 Pfam Protein kinase domain 127 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0213 484 Pfam Protein kinase domain 324 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0213 484 Gene3D Transferase(Phosphotransferase) domain 1 322 447 - -
Ahy20g0213 484 Gene3D Phosphorylase Kinase; domain 1 81 186 - -
Ahy20g0213 484 ProSiteProfiles Protein kinase domain profile. 83 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0213 484 MobiDBLite consensus disorder prediction 1 21 - -
Ahy20g0213 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Ahy20g0213 484 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 8 484 - -
Ahy20g0213 484 Gene3D Transferase(Phosphotransferase) domain 1 187 254 - -
Ahy20g0213 484 SMART serkin_6 83 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0213 484 PANTHER FLIPPASE KINASE 1-RELATED 8 484 - -
Ahy20g0213 484 SUPERFAMILY Protein kinase-like (PK-like) 63 462 IPR011009 -
Ahy20g0213 484 CDD STKc_phototropin_like 81 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0213 Ahy-Chr20 1913770 1915626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0213 11 484 AGC Kinase Gene Family AT2G34650 64.854 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Ahy20g0213 Pkinase 7.00E-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0213 - - gmx:100795536 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0213 20 1913770 1915626 Ahy20g0213 20 1913770 1915626 ECH
Ahy20g0213 20 1913770 1915626 Ahy10g0044 10 556898 559042 hybridization