Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0210 ATGGCTTTTGAGCCATTGGATTGGTATTGTCAGCCAGTTGCAAATGGAGTATGGACCACAACAGTTGACAATGCCTTCGGAGCTTACACTCCTTGCGCGGTTGATTCTTTGGTGATCTCCGTTTCTCATTTGGTGCTTCTAGGCCTGTGTGTCTACCGGATATGGTTGATTAAGAAGGATTTCAAAGCCAAAAGGTTCTGCTTACGGTCAAAACTCTATAATTATTTGCTTGGGTTGTTAGCTTTGTATTGTGTGGCCGAGCCCTTATATAGATTGATTGCTGGACTATCAATTCTAAATTTAGATGGTCAGACTCAACTTGCTCCATTTGAGATCACGTCACTGGTCATTGAAGTTCTTACTTGGGGTGCTATGCTGATTTTGATTGGCGTTGAGACTAAAGTTTACATTTACGAATTCAGATGGTTTATCCGATTTGGTTTGCTTTATTCTATTGTCGGGGATACTGTCATGCTCAACCTTATCATTTCTGTGCAGGAGTTGTATAGCAGGTCAGTGCTGTATTTGTACATAAGCGAGGTGGTCTGCCAGGCTTTGTTTGGGCTACTTTTGCTTGTGTATATACCTACTTTGGATCCTTATCCGGGTTATACCCCTGTTCGGAGTGACTTGGTTGTTGATACTGCATATGAAGAACTGCCCGGAGGAGAGCAGATATGTCCTGAAAGGCATGCAAACATATTGTCAAGAATCCTTTTTTCTTGGATGAATCCTATCATGAATCTAGGATATCAAAGACCCCTTACAGAGAAAGATATATGGAAGTTAGATACATGGGATCGGACTGAGACACTGAATGAAAAGTTCCAGAGATGTTGGGTAGAAGAATCTCGGAGGTCGAAACCTTGGCTTTTAAGAGCATTGAATGCAAGCCTTGGTGGGAGGTTTTGGTGGGGAGGATTTTGGAAGATTGGAAATGATCTCTCCCAGTTTTTGGGCCCACTAATATTGAATCAGCTGCTAGAGTCTATGCAAAATGGTGATCCAGCCTGGATTGGATACGTTTTTGCCTTCTCAATATTTGTTGGAGTGGTCTTTGGGGTGTTATGTGAAGCTCAATATTTTCAGAATGTCATGCGTGTTGGATTCCGGCTAAGATCAACACTGGTAGCTGCTGTATTTCGCAAATCATTAAGGCTTACCCATGAAGCTCGAAAGCAATTTGCATCTGGAAAAATAACCAACTTGATGACTACTGATGCCGAAGCACTTCAGCAAATATGCCAGTCACTTCATACTTTGTGGTCAGCTCCGTTCCGCATTACCATTGCCATGGTTCTTCTTTATCAACAACTAGGTGTTGCTTCCCTTTTGGGCGCTTTGATGCTAGTCCTTATGTTTCCATTACAGACATTTATCATCAGTAGAATGCAAAAGTTGTCTAAGGAAGGATTACAACGTACAGACAAGAGAATTGGCCTTATGAATGAAGTTTTGGCAGCTATGGACACTGTAAAATGTTATGCATGGGAGAGTAGTTTCCAGTCTAAAGTTCAGAATGTCCGAGATGATGAATTATCATGGTTTCGAAAAGCATCATTACTTGGAGCGTTAAATGGATTCATACTGAATAGTATTCCAGTTTTTGTAACTGTGATTTCATTTGGAATGTTCACCTTACTTGGAGGGAATTTGACACCCGCAAGAGCTTTTACATCACTTTCTCTGTTTGCTGTGCTTCGGTTTCCTCTCTTCATGCTTCCTAATATTATAACTCAGGCGGTTAATGCAAATGTATCATTGAAGCGTTTGGAGGATTTGCTCTTAGCAGAAGAGAGAATACTTTTACCAAATCCACCGCTTGAGCCAGGATTACCAGCCATCTCAATCAAAAACGGAAACTTCTCCTGGGATTCCAAGGCAGAAAGGCCTACATTGGCAAACATAAACTTGGATATACCTGTTGGTAGCCTAGTTGCAGTTGTTGGAAGTACAGGAGAAGGGAAAACATCACTAGTATCTGCAATGCTTGGAGAACTCCCTGCAGTTGTAGGTTCAACTGTTGTTATGAGAGGGACAGTTGCTTACGTACCCCAAGTCTCTTGGATTTTTAATGCAACTGTGCGAGATAATGTTTTATTTGGTTCTGCCTTTGACCCAATAAGATATGAAAGGGCAATAGATGTGACTGAACTACGACATGACCTTGAGTTACTGCCTGGTGGTGATCTTACCGAAATTGGTGAAAGAGGTGTGAACATCAGTGGTGGTCAAAAGCAAAGAGTATCCATGGCTAGAGCTGTCTACTCCAAATCCGACGTGTACATTTTTGATGATCCCCTTAGTGCTCTAGATGCGCATGTCGCTAAACAGGTTTTTGATAAATGCATCAAGGGAGAATTGAGAGGGAAGACCCGAGTTCTTGTTACAAATCAACTGCATTTCCTTTCACAGGTGGATAGAATCATTTTGATCCATGAAGGTACTGTGAAAGAGGAGGGAACATTTGAGGAGCTCTCTAACCAGGGGCCATTGTTCCAAAAGCTTATGGAAAATGCTGGAAAGATGGAGGAGTATGAAGAAGAAACGGTAGATACTGAAACTGCTGATCCAAAGTCCTCTTCAAAACAGGTGGCCAATGGAGAACTTAATGATACTGCAAAGAGTGGGAGTAAGGCAAAAGAAGGAAAATCTGTCCTTATTAAACAGGAAGAACGGGAAACAGGTGTTGTCAGTATGAAAGTTTTAGCAAGATACAAGACTGCATTAGGAGGTCTTTGGGTGGTTGTAATACTCTTTGGATGCTATTTCTTAACAGAAGTGTTACGAATTTCAAGTAGCACATGGTTGAGCCATTGGACTGATCAGAGTGCTTCAGTGGGCTATGATCCTGGATTTTATAATCTGATATATGCAGCTCTATCATTTGCTCAGGTTATGGTGACTTTAACAAATTCTTATTGGTTGATCATATCAAGTCTATATGCAGCCAGAAGGTTGCATGAAGCCATGCTTCACTCCATATTACGAGCTCCTATGGTTTTTTTTCATACAAATCCACTTGGAAGAGTAATCAACAGGTTTGCAAAGGATTTAGGTGACATTGATCGTAATGTTGCCCCATTTGTCAATATGTTTCTGGGTCAAGTGTCTCAGCTCCTTTCAACATTCGTCCTGATAGGGATTGTCAGCACAATGTCCTTGTGGGCGATAATGCCGTTGTTGGTACTGTTTTATGGAGCATATCTCTACTATCAGAGCACCGCCCGTGAAGTAAAGCGCTTAGATTCAATTAGTAGATCCCCTGTTTATGCACAATTTGGAGAAGCACTTAATGGTCTATCAACAATTCGTGCTTACAAGGCTTATGACCGCATGGCTGATATCAACGGAAAGTCCATGGACAACAACATACGATTCACTCTGGTGAACATGAGTGGAAATCGATGGCTTGCAATTCGATTGGAAACTCTGGGAGGTCTCATGATATGGTTTACTGCAACCTTTGCGGTAATGCAGAATGGGAGGGCCGAGAACCAGCAGGAATTTGCATCCACCATGGGTTTACTACTTAGTTATGCTTTGAACATTACCAGTTTGCTTACTGGTGTGCTCAGGCTTGCTAGTTTGGCTGAGAATAGTCTAAATGCTGTTGAGCGTGTAGGCACTTATATAGATTTGCCTTCAGAGGCACCATCCATCATTGAGGATAGTCGCCCCCCTCCAGGCTGGCCCTCATCTGGATCAATCAGATTTGAGGATGTTGTACTTCGATACAGGCCTGAACTTCCTCCTGTCCTTCATGGCTTGAATTTCACAATTTTTCCAAGCGATAAGGTTGGCATTGTAGGAAGGACAGGAGCTGGAAAATCTAGCATGCTTAATGCTTTATTTCGAATTGTGGAATTGGAAAGAGGAAGAATATTAATTGATGATTGTGATATTGCAAAGTTTGGGCTGGCTGATTTGCGTAAAGTTCTTGGCATTATACCACAGTCCCCTGTTTTGTTTTCAGGAACTGTAAGATTTAATCTTGACCCTTTTAATGAACACAATGATGCTGACCTCTGGGAGGCTCTGGAGAGGGCACATTTGAAGGATGTGATACGGAGGAATTCTCTGGGGCTGGATGCTGAGGTCTCTGAGGCAGGCGAGAACTTCAGTGTTGGGCAGAGGCAACTGTTGAGTCTCTCTCGGGCATTATTGCGTAGATCAAAGATATTAGTACTTGACGAAGCCACTGCAGCAGTAGATGTTAGAACAGATGCCCTCATACAGAAAACAATTCGAGAGGAATTCAAATCGTGCACCATGCTCATCATTGCTCATCGTCTTAACACCATCATAGACTGTGATCGGATTCTTTTGCTTGATGGTGGTAAGGTTCTTGAATATGATACCCCTGAAGAACTGCTATCAAATGAAGGCAGTTCGTTCTCTAAGATGGTGCAAAGTACAGGAGCCGCAAATGCCCAATATCTACGCAGCTTAGCACTCGGGAGCAAGTCAGATAGGGAAGAGAGTAAGCATAATGATGGCCAGAAAAAATGGCTTGCTTCGTCTCGATGGGCTGCTGCAGCTCAATTTGCCCTTGCCGTCAGTCTCACCTCATCACAGAATGACCTAAAAAGATTGGAAGTGGAAGAAGAGAATAGCATACTCAAGAAAACAAGGGATGCTGTGATAACTTTGCAGGGGGTTTTGGAAAGGAAGCATGATAGAGAAATCGAGGAATCTTTAGACCGATACCAAATATCCTCAGACAGTTGGTGGTCATCACTCTACAAGATGATTGAAGGTCTTGCAATGATGAGCAGACTGGCCAGGAGCAGGCTTCATCAATCAGACTTTGATTTTGATGATAGATCAATTAACTTTGATCAAGTTGATATGTAG 4857 0.4233 MAFEPLDWYCQPVANGVWTTTVDNAFGAYTPCAVDSLVISVSHLVLLGLCVYRIWLIKKDFKAKRFCLRSKLYNYLLGLLALYCVAEPLYRLIAGLSILNLDGQTQLAPFEITSLVIEVLTWGAMLILIGVETKVYIYEFRWFIRFGLLYSIVGDTVMLNLIISVQELYSRSVLYLYISEVVCQALFGLLLLVYIPTLDPYPGYTPVRSDLVVDTAYEELPGGEQICPERHANILSRILFSWMNPIMNLGYQRPLTEKDIWKLDTWDRTETLNEKFQRCWVEESRRSKPWLLRALNASLGGRFWWGGFWKIGNDLSQFLGPLILNQLLESMQNGDPAWIGYVFAFSIFVGVVFGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEARKQFASGKITNLMTTDAEALQQICQSLHTLWSAPFRITIAMVLLYQQLGVASLLGALMLVLMFPLQTFIISRMQKLSKEGLQRTDKRIGLMNEVLAAMDTVKCYAWESSFQSKVQNVRDDELSWFRKASLLGALNGFILNSIPVFVTVISFGMFTLLGGNLTPARAFTSLSLFAVLRFPLFMLPNIITQAVNANVSLKRLEDLLLAEERILLPNPPLEPGLPAISIKNGNFSWDSKAERPTLANINLDIPVGSLVAVVGSTGEGKTSLVSAMLGELPAVVGSTVVMRGTVAYVPQVSWIFNATVRDNVLFGSAFDPIRYERAIDVTELRHDLELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSKSDVYIFDDPLSALDAHVAKQVFDKCIKGELRGKTRVLVTNQLHFLSQVDRIILIHEGTVKEEGTFEELSNQGPLFQKLMENAGKMEEYEEETVDTETADPKSSSKQVANGELNDTAKSGSKAKEGKSVLIKQEERETGVVSMKVLARYKTALGGLWVVVILFGCYFLTEVLRISSSTWLSHWTDQSASVGYDPGFYNLIYAALSFAQVMVTLTNSYWLIISSLYAARRLHEAMLHSILRAPMVFFHTNPLGRVINRFAKDLGDIDRNVAPFVNMFLGQVSQLLSTFVLIGIVSTMSLWAIMPLLVLFYGAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDNNIRFTLVNMSGNRWLAIRLETLGGLMIWFTATFAVMQNGRAENQQEFASTMGLLLSYALNITSLLTGVLRLASLAENSLNAVERVGTYIDLPSEAPSIIEDSRPPPGWPSSGSIRFEDVVLRYRPELPPVLHGLNFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELERGRILIDDCDIAKFGLADLRKVLGIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDGGKVLEYDTPEELLSNEGSSFSKMVQSTGAANAQYLRSLALGSKSDREESKHNDGQKKWLASSRWAAAAQFALAVSLTSSQNDLKRLEVEEENSILKKTRDAVITLQGVLERKHDREIEESLDRYQISSDSWWSSLYKMIEGLAMMSRLARSRLHQSDFDFDDRSINFDQVDM* 1619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0210 1618 Gene3D - 1220 1473 IPR027417 -
Ahy20g0210 1618 CDD ABCC_MRP_domain1 615 816 - -
Ahy20g0210 1618 PANTHER ABC TRANSPORTER C FAMILY MEMBER 1 32 1516 - -
Ahy20g0210 1618 CDD ABC_6TM_ABCC_D2 916 1212 IPR044726 GO:0140359
Ahy20g0210 1618 SUPERFAMILY ABC transporter transmembrane region 289 591 IPR036640 GO:0005524|GO:0016021
Ahy20g0210 1618 ProSitePatterns ABC transporters family signature. 1374 1388 IPR017871 GO:0005524
Ahy20g0210 1618 Gene3D - 610 865 IPR027417 -
Ahy20g0210 1618 MobiDBLite consensus disorder prediction 844 878 - -
Ahy20g0210 1618 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 917 1200 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy20g0210 1618 Pfam ABC transporter 1254 1402 IPR003439 GO:0005524
Ahy20g0210 1618 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 617 839 IPR003439 GO:0005524
Ahy20g0210 1618 CDD ABCC_MRP_domain2 1235 1455 - -
Ahy20g0210 1618 SUPERFAMILY ABC transporter transmembrane region 913 1217 IPR036640 GO:0005524|GO:0016021
Ahy20g0210 1618 Pfam ABC transporter transmembrane region 917 1160 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy20g0210 1618 Pfam ABC transporter transmembrane region 307 571 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy20g0210 1618 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524
Ahy20g0210 1618 SMART AAA_5 642 816 IPR003593 -
Ahy20g0210 1618 SMART AAA_5 1263 1456 IPR003593 -
Ahy20g0210 1618 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 583 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy20g0210 1618 Pfam ABC transporter 633 768 IPR003439 GO:0005524
Ahy20g0210 1618 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 612 838 IPR027417 -
Ahy20g0210 1618 MobiDBLite consensus disorder prediction 857 874 - -
Ahy20g0210 1618 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 32 1516 - -
Ahy20g0210 1618 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1228 1463 IPR027417 -
Ahy20g0210 1618 CDD ABC_6TM_ABCC_D1 305 591 IPR044746 GO:0140359
Ahy20g0210 1618 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1237 1471 IPR003439 GO:0005524
Ahy20g0210 1618 Gene3D ABC transporter type 1, transmembrane domain 277 601 IPR036640 GO:0005524|GO:0016021
Ahy20g0210 1618 Gene3D ABC transporter type 1, transmembrane domain 879 1218 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0210 Ahy-Chr20 1854604 1871915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0210 1234 1477 Calmodulin-binding Proteins AT2G36910 30.800 4.58e-29 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0210 - - gmx:100801762 2786.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0210 20 1854604 1871915 Ahy10g0042 10 500550 529452 hybridization