Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0189 ATGGGGAAGCTGATTACCACTACCAAACCTCTAATCTTCCAATCCAAGCTCCTCTGTTTTTCTCTGTTATACCTCTTCACAACTCTTTTCGTCGCTCTCTACACCATTCTCTCTCAATCCAAATGCTTATTCAGATCTTCCCCTTTGGATCCAATTCAGGATCCTCTCTTCTCTTACCCTTCTTCCTATGGAGAGCACAAGTATGCTGTCTCAACCACACGTTCTACATGCACTTCTCCTATTTTCTTTTCAGATTACTTGGATGTTGTGAAGGAGATCAAGAATTTGATCAAGGACTCTTCATCAGCTGAGGAGTCGAGTGCTCTGCGCTACATGCAGGGGAATGCAGAGAGTTTTGGTGGGAACTTGAGCATCAAGGCGAGGTTCTCTTATTTCGATCATCAAATTGATAACACTCAAGTACCCTGCGGATTTCTCAAGAAATTTCCAACCAGTGATTCCGATCGAATTGCGATGGAGAAGTGTGAAGGTGTAGTAGTAGTTTCAGCAATCTTCAATGACCATGATAAGATACGGCAACCGAAGGGAATTGGTGGGAAAACAGTGGAAGAAGTGTGTTTCTTCATGTTTATAGATGAGGTGACAATGAAGGGTCTTGAAGATCATGGAATGATAGGGAGGGAATCAAAAGAGCATAAGATAGGTGTGTGGAGGATTGTTAAGGTTGTGAAGGAGTTGTATGAGAGCCCAGCAATGAATGGGATCATACCAAAATACTTAGTCCATAGGCTGTTCCCAAATTCGAAATTCAGCATTTGGGTGGATGCAAAGTTGCAGCTTGTGGTTGATCCTCTGCTGTTGATTCATTCGCTTGTTATATCTCAGAATGTGGACATGGCTATATCAAAACATCCTTATTTTCTTCATACCATGGAAGAAGCAATGGCAACTGCCCGATGGAAGAAATGGTGGGATATTAACGCCTTGAAGCACCAAATGGAGACCTACTGTGAACATGGACTCCAACCATGGTCCCCAACCAAGCTCCCTTATGCTTCAGATGTGCCAGATAGTGCTGTGATCCTTCGGAGGCATGGAGTGGGAAGTAACCTATTCTCTTGTCTAATGTTCAACGAGTTGGAGGCATTCAACCCAAGAGATCAATTGGCTTTTGCATTTGTGAGGGATAAGATGAAGCCCAACGTTACCATCAACATGTTTGAGGTGGAAGTGTTTGAGCAGCTGGCACTTGAGTTCAGACACAACCTCAAGAATAAACGCCATGGGAGCCTTTTGTCCACTTCAGCAAGGACCAAAAGGGCACACCCTGGTTTCTTGTATGTTAATGCCACCTGTTGCAGCAAGTGCCAGAAGTATCTTCTCACCATGTGGGATCAATCCAATCATTGA 1371 0.4384 MGKLITTTKPLIFQSKLLCFSLLYLFTTLFVALYTILSQSKCLFRSSPLDPIQDPLFSYPSSYGEHKYAVSTTRSTCTSPIFFSDYLDVVKEIKNLIKDSSSAEESSALRYMQGNAESFGGNLSIKARFSYFDHQIDNTQVPCGFLKKFPTSDSDRIAMEKCEGVVVVSAIFNDHDKIRQPKGIGGKTVEEVCFFMFIDEVTMKGLEDHGMIGRESKEHKIGVWRIVKVVKELYESPAMNGIIPKYLVHRLFPNSKFSIWVDAKLQLVVDPLLLIHSLVISQNVDMAISKHPYFLHTMEEAMATARWKKWWDINALKHQMETYCEHGLQPWSPTKLPYASDVPDSAVILRRHGVGSNLFSCLMFNELEAFNPRDQLAFAFVRDKMKPNVTINMFEVEVFEQLALEFRHNLKNKRHGSLLSTSARTKRAHPGFLYVNATCCSKCQKYLLTMWDQSNH* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0189 456 PANTHER ALKALINE CERAMIDASE-RELATED 1 453 IPR006852 -
Ahy20g0189 456 PANTHER OS01G0210400 PROTEIN 1 453 - -
Ahy20g0189 456 Pfam Protein of unknown function (DUF616) 113 408 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0189 Ahy-Chr20 1677142 1679818 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0189 20 1677142 1679818 Ahy20g0189 20 1677142 1679818 ECH
Ahy20g0189 20 1677142 1679818 Ahy10g0022 10 308376 310509 hybridization
Ahy20g0189 20 1677142 1679818 Ahy13g4603 13 146406149 146411973 PCT
Ahy20g0189 20 1677142 1679818 Ahy3g4352 3 143494649 143500473 PCT