LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy20g0182	ATGTCAATTGCATCTCCTCTGACTCCCCTATTGCCATACATAACATGCTTCATAATCTTGCTGGTCCTTGTAGAACAGATCAAGTACATAAGCAAGAAGAGGTCTATCCCAGGGCCAAGCGTGGTCCTGCCCTTCATAGGAAACGCAATCGCATTGGTCAGAAACCCAACCAAGTTCTGGGACCAACAATCCAGCCTCGCCAAGTCCACCACCGCAGGACTCTCTGTGAACTACATCATCGGCAACTTCATAGTCTTCATAAGAGACACAGAGCTCTCCCACAAGGTCTTCGCCAATGTTAGGCCCGACGCATTCAGGCTCGTGGGCCACCCATTCGGTAAAAAGCTATTCGGTGAGCACAACCTCATCTACATGACGGGCCAAGACCATAAGAATCTCCGTCGTCGAATCGCACCCAACTTCACTCCAAGGGCTCTTTCCACGTACACCGCGCTGCAGCAGATCACAATCCTCAACCATCTTAAGTCCTGGGTTCAGCTCTCACACAAAGCCCAAGCCCCCATTCCGCTCCGCGTTTTAGCCCGGGATATGAACTTAGAGACTTCTCAGACGGTCTTCGTTGGGCCCTACTTGACCCCCAAGGCCCGCCAGAGCTTCGAGAGGGATTACTATCTTTTCAACGTCGGTCTCATGAAGCTCCCCATCGACCTCCCCGGCATGGCGTTCCGAAACGCCAGGCTCGCCGTCGATCGTCTTGCCGGAACCCTAGCTACCTGCACGGCTATGAGCAAGAAGAGGATGGAGAACGGAGAGGAACCTTCGTGCTTAATCGATTACTGGATGCAGGACACACTACGCGAAATCGCAGAGGCGCAGCTCGCCGGAGATACTTCACCTCCGCCGTATTCCTCTGACGCCGAGATTGGTGGATACCTCTTTGACTTCCTCTTTGCGGCTCAGGACGCGTCCACGTCGTCGCTTCTGTGGGCGGTGACGCTGCTGGACTCTCATCCTGATGTGTTGGCCAGGGTGAGGGACGAGGTCGCCGGAATCTGGTCGCCTGAGTCCGACGAACTAATAACGACGGACCAGTTGAGGGAGATGAGGTACACTCAAGCGGTGGCTCGTGAGGTGGTGAGATTCCGTCCGCCGGCGACTCTGGTGCCGCACATCGCGGCGGTGGATTTCCCGTTGACTGAAAACTACGTGGTTCCGAAGGGCGCGATCGTTTTCCCGTCGGTTTACGAGTCATCGTTTCAGGGATTCCCTGAACCGGACCGATTCGACCCGGACCGGTTCTCAGAGGAGAGACAAGAGGACCAGATTTATAAAAGAAACTTTCTGGCGTTTGGTGCTGGGGCCCATCAGTGCGTGGGCCAGAGGTATGCCTTGAATCATTTGGTTCTGTTCATAGCGATGTTCGCCTCGTTGATCGATTTCAAGAGAGATAGAACGGACGGCTGCGATGATATTGCATACGTCCCCACCATCTGCCCCAAAGACGATTGCAGGGTGTTCCTGTCTAGGCGTTGCGTACGTTATCCTTCTTTCCCCGGGCACTGA	1524	0.5453	MSIASPLTPLLPYITCFIILLVLVEQIKYISKKRSIPGPSVVLPFIGNAIALVRNPTKFWDQQSSLAKSTTAGLSVNYIIGNFIVFIRDTELSHKVFANVRPDAFRLVGHPFGKKLFGEHNLIYMTGQDHKNLRRRIAPNFTPRALSTYTALQQITILNHLKSWVQLSHKAQAPIPLRVLARDMNLETSQTVFVGPYLTPKARQSFERDYYLFNVGLMKLPIDLPGMAFRNARLAVDRLAGTLATCTAMSKKRMENGEEPSCLIDYWMQDTLREIAEAQLAGDTSPPPYSSDAEIGGYLFDFLFAAQDASTSSLLWAVTLLDSHPDVLARVRDEVAGIWSPESDELITTDQLREMRYTQAVAREVVRFRPPATLVPHIAAVDFPLTENYVVPKGAIVFPSVYESSFQGFPEPDRFDPDRFSEERQEDQIYKRNFLAFGAGAHQCVGQRYALNHLVLFIAMFASLIDFKRDRTDGCDDIAYVPTICPKDDCRVFLSRRCVRYPSFPGH*	508

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Ahy20g0182	507	PRINTS	E-class P450 group IV signature	36	53	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy20g0182	507	PRINTS	E-class P450 group IV signature	428	444	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy20g0182	507	PRINTS	E-class P450 group IV signature	355	371	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy20g0182	507	PRINTS	E-class P450 group IV signature	403	421	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy20g0182	507	PRINTS	E-class P450 group IV signature	296	322	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy20g0182	507	PRINTS	E-class P450 group IV signature	444	462	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy20g0182	507	PANTHER	CYTOCHROME P450 61	14	494	-	-
Ahy20g0182	507	SUPERFAMILY	Cytochrome P450	29	497	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy20g0182	507	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	437	446	IPR017972	GO:0005506\|GO:0016705
Ahy20g0182	507	Gene3D	Cytochrome P450	26	501	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy20g0182	Ahy-Chr20	1593692	1595985	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy20g0182	10	504	Cytochrome P450	AT2G34500	68.081	0.0	716

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy20g0182	K09832		-	gmx:100808148	842.032

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy20g0182	20	1593692	1595985	Ahy20g0182	20	1593692	1595985	ECH
	Ahy20g0182	20	1593692	1595985	Ahy10g0014	10	244662	247005	hybridization

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