Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0166 ATGAACATAAAAAAGGGTGAGATTGAGAAGGTGAATTGGAAGAATTTGAGTTACAGTGAATTTGTGGAGAGATTCATGCAAAAAAACCAACCTTTGTTGCTCAATGGATTCTCGGAACATCACAATTGGAGAGCTTCAGTTGATTGGGTCACCCCTCTTGGCCACCCCAATTTTCAATTTTTCTCCACAAATTTTGGGGATTCCAAAGTTCAGGTTGCAGATTGTGACACAAGAGAGTTCACCGATCAGAAAAGGGAGGAGATGCTGGTTTCGGATTTTATAGGACGTTGCCTTCAAGATGTTGAAGGTTCTGCAGTCCAATCTAGCAATAGTCACTCTGTACCGTATTTGAAGGATTGGCATTTTGTAAAGGAGTATCCAGAATATGTAGCATATAAAACTCCAATGTTCTTTTGTGATGATTGGCTTAACCTGTATCTTGACAACTACAGAATGCATACTGATTCTGACACATACCAAGAAAATAACGAAATATGTTGCTCTGACTATCGTTTTGTATACATGGGAGTTAAAGGATCTTGGACTCCTCTTCATGCCGATGTTTTCCGGTCATATAGCTGGTCGGCAAATGTTTGTGGAAAAAAGAGATGGCTTTTTCTAGATCCTTCCCAACATCATCTTGTATTTGACAGGAATATGAAAAATTGTGTATATAATATCTTTGATGAAGTATCTGACTCAAAATTTCCTGGTTTCAAAAAGGCTATCTGGTTAGAATGCATGCAAGAAGCAGGTGAAATTATATTTGTTCCCAGTGGATGGTACCATCAAGTTCATAATTTGGAGGATACAATATCTATAAACCACAACTGGTTCAATGCGTATAACCTTTCATGGGTGTGGAATTTACTTTTGAGGGACTACAATGAGGCCATCGAATACATAGAAGACATCAAGGATGTATGTGAGGATTTCGAAGGTCTTTGCCAGCGCAATCTTGCTGCTAACACGGGGATGAACTTTTATGACTTCTTTGCTTTCATATCACGCTTCACCTTGGCCAACATTGTCTTGCTTTGTTATATAAATGGAAGACATGGAAATATCACTCAAATCTCATCAACAATAGCTCGGCATTTATTGATGAATCTTGGATCCATAAGGAAGGTTGCATCGGAGATGAAAGACAGGCATGCTCTAAAAGGAAATCAGGATCGCGCTGTGGACATTATAGAAACACTTGAAGATCCTAGGTTTTGCAAACTGTGCATGGATATTGGAAGAACATATGCAATGATACATGAAGAGTCTCATTTGTCCTTTGATTTCGAGAGCGCTTCGGCTGGTGAAATAGCGGATCTCACTGTTTTGAAAGCATACACTTCATCTCAGTTCTACACACCTGAAGATCTTGTTGAATTTATAGACAATGCTGTTGCAGAACATGGTGACTGTTACATCAACTCATCTGCAATATGA 1440 0.3896 MNIKKGEIEKVNWKNLSYSEFVERFMQKNQPLLLNGFSEHHNWRASVDWVTPLGHPNFQFFSTNFGDSKVQVADCDTREFTDQKREEMLVSDFIGRCLQDVEGSAVQSSNSHSVPYLKDWHFVKEYPEYVAYKTPMFFCDDWLNLYLDNYRMHTDSDTYQENNEICCSDYRFVYMGVKGSWTPLHADVFRSYSWSANVCGKKRWLFLDPSQHHLVFDRNMKNCVYNIFDEVSDSKFPGFKKAIWLECMQEAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWNLLLRDYNEAIEYIEDIKDVCEDFEGLCQRNLAANTGMNFYDFFAFISRFTLANIVLLCYINGRHGNITQISSTIARHLLMNLGSIRKVASEMKDRHALKGNQDRAVDIIETLEDPRFCKLCMDIGRTYAMIHEESHLSFDFESASAGEIADLTVLKAYTSSQFYTPEDLVEFIDNAVAEHGDCYINSSAI* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0166 479 ProSiteProfiles JmjC domain profile. 123 295 IPR003347 -
Ahy20g0166 479 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE JMJD4 5 468 - -
Ahy20g0166 479 Pfam Cupin-like domain 20 278 IPR041667 -
Ahy20g0166 479 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 5 468 - -
Ahy20g0166 479 SUPERFAMILY Clavaminate synthase-like 17 307 - -
Ahy20g0166 479 SMART cupin_9 115 295 IPR003347 -
Ahy20g0166 479 Gene3D Cupin 2 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0166 Ahy-Chr20 1367031 1371644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0166 6 287 Glycosyltransferase AT1G78280 22.222 4.07e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Ahy20g0166 Cupin_8 3.40E-20 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0166 - - aip:107632417 889.797