Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0148 ATGCAGAGCGTGGCTTTCACTCTCTCTCCCTCCCTCCCTCTCCGCACTCCCCACGCGCCTCGCTCCGCCTCCCTCTCTTTCCATCCATTGCGTCTCTCTGCTTCCAAATCCGATCCCCTTACCTCCAATGCAACCTCTTCTTCCTTCACGCGCCGATCCTGGCTTCATTCTTCTTCCTCCTCCTTTAAGTTCCGCCCGCGCAATTCCGATCTCGACGACCGCGCTCGCTTCGAGGCAAGAGCCGCCTCCGTTCCCGAAAGCGCCAGCGGAGACGCCGCTGCCTCCGGCGGCTTGCTCAAGACTCTTGAGCTTGGCTCCCTCTTCGGCCTCTGGTACCTATTCAACATCTACTTCAATATCTACAATAAGCAGGTCTTGAAGGTTTATCAATTTCCGGTGACTGTGACCCTTGTTCAATTTGCTGTTGGAACTGTTCTTGTGTCGTTTATGTGGGGTTTGAATCTGTACAAGAGACCGAAGATCACTGGTGCTCAGCTTGCAGCAATATTGCCACTGGCTCTCGTGCATACTTTCGGAAATCTTTTCACCAATATGAGTCTTGGAAAGGTGGCTGTGTCGTTCACTCACACAATCAAAGCCATGGAGCCTTTCTTTTCAGTGGTCTTTTCCGCAATGTTCCTTGGAGAGATGCCTACACCATGGGTGGTTGGTTCCCTTTTGCCTATTGTTGGTGGTGTTGCATTGGCATCTGTGACTGAGGCCTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAACGTGTTGAATCAATCTCGTAATGTTCTTAGCAAAAAAGTCATGGTTAAGAAAGAGGATTCTATGGATAACATAACCCTCTTCTCTATAATAACGATCATGTCCTTCTTCTTGTTAGCACCTGTGGCTTTCGTCATGGAGGGTGTCAAATTTACCCCTACTTACCTGCAATCTGCTGGTTTAAATGTGAGACAAGTGTACATTAGATCTGTACTTGCTGCACTCTGTTTCCATGCATATCAGCAAGTTTCTTACATGATATTGCAGAGAGTATCACCTGTTACTCACTCTGTTGGCAACTGTGTGAAGAGGGTTGTGGTCATTGTTAGCTCTGTCATCTTCTTCCAAACACCTGTCTCTCCTGTGAACGCTTTCGGAACTGCTGTAGCTCTTGCTGGAGTTTTCCTATACTCAAGGGTGAAGAGGATTAAGCCAAAGGCCAAGACAGCTTAA 1215 0.4831 MQSVAFTLSPSLPLRTPHAPRSASLSFHPLRLSASKSDPLTSNATSSSFTRRSWLHSSSSSFKFRPRNSDLDDRARFEARAASVPESASGDAAASGGLLKTLELGSLFGLWYLFNIYFNIYNKQVLKVYQFPVTVTLVQFAVGTVLVSFMWGLNLYKRPKITGAQLAAILPLALVHTFGNLFTNMSLGKVAVSFTHTIKAMEPFFSVVFSAMFLGEMPTPWVVGSLLPIVGGVALASVTEASFNWAGFWSAMASNVLNQSRNVLSKKVMVKKEDSMDNITLFSIITIMSFFLLAPVAFVMEGVKFTPTYLQSAGLNVRQVYIRSVLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNAFGTAVALAGVFLYSRVKRIKPKAKTA* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0148 404 Pfam Triose-phosphate Transporter family 103 392 IPR004853 -
Ahy20g0148 404 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 76 378 - -
Ahy20g0148 404 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 102 402 IPR004696 GO:0016021|GO:0022857|GO:0055085
Ahy20g0148 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 316 396 - -
Ahy20g0148 404 PANTHER SOLUTE CARRIER FAMILY 35 76 378 - -
Ahy20g0148 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 149 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0148 Ahy-Chr20 1187902 1191074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0148 1 404 Antiporters AT5G33320 71.671 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0148 K15283 - gmx:732612 576.244