Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0147 ATGAAGGAAATTGATCTTCCATTTGGAATCTCTAATTCATCTCATGGATTCTACCAAGATCTCCATCACCATGTTGATCAATTTCATCAAGTGAATGTGAATGGCAATTCCTCATCATCAAATCATCAAGTTTCTCTAACAAATCTTGATTCCTTTGATGTCTATGAGTGCAAGCCTTTTGTGGAGAATAATAATGTTCATGTTATGGATGATTTCCAATATAACGGAGGAGGTTTTGGTAATTTGAACCTCACTAATAACAATAATCGAAGTACTCCATTGGATATCATAGTTGGAAACCAAGGTTATTTACCATTTTATCCTCTTCAAGAGACCAAGCCTACGAATCTCGTTCTGCCAGATGAAGTCTCATCCATATCAACAATGGGTTATTACAAAAGGGTCAATGGAGTCAACAAAAACAATAAGTTATACCCAACATCCAAGAAGACCTACAAACTTCAAAAGAAGTCTAACATAGTAAAGGGCCAATGGACAGAAAGCGAAGATAGCTTATTGATTCAGCTGGTAGAACAATATGGATTAAGGAAATGGTCTCATATTGCTCAAATGCTGCCTGGGAGAATTGGAAAACAATGTAGAGAGCGTTGGCATAATCATCTAAGACCTGACATTAAGAAAGATATATGGACGGAAGATGAGGATAAGATCCTAATTGAAGCTCATGTGGAGATAGGAAACAAGTGGGCAGAAATTGCGAAAAGATTGCCCGGACGAACTGAAAACTCGATCAAGAACCATTGGAATGCTACCAAGAGAAGGCAATATTCAAAAAGGAAGTGTAGATCCAAGTACCCTAAAACATCTCTCCTTCAAGAATACATCAAGAGTTTAAATTTGGACAAAAATCCTCTAATGGACTATAGGAGAAAATCTGTTAACCCTAGAGGCAATGCTAACAAAACTAGCTCGGCCGCCTCAAGCAAAGCACCACCACCACTTTCGGCGGCGCAACCTCAGCCGGTAGGTAATAATAGTCAATTCTCTATGTCGGATCGGTTGGTGCCAAGTTATGATTTCAATGAGGTAATGCCGGATTTTTGTTTTGATGAGAATTTGTTTGAAGGAGGGTGTAGCATTGATTCATTGCTTGATGACATTCCTTGTGCTCCTATTATGGATACTAGTACTATTAATGTTGTGGATGTTGATTACAAGTGTGATGATATGCAACAAGAGATTGTGGAATCCATGATGGAGGGTGATGGAATAATCAAGAAGGAGATGGATTTGGTGGAGATGGTGACAAAGGTCAATAAAAATTGA 1287 0.3838 MKEIDLPFGISNSSHGFYQDLHHHVDQFHQVNVNGNSSSSNHQVSLTNLDSFDVYECKPFVENNNVHVMDDFQYNGGGFGNLNLTNNNNRSTPLDIIVGNQGYLPFYPLQETKPTNLVLPDEVSSISTMGYYKRVNGVNKNNKLYPTSKKTYKLQKKSNIVKGQWTESEDSLLIQLVEQYGLRKWSHIAQMLPGRIGKQCRERWHNHLRPDIKKDIWTEDEDKILIEAHVEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCRSKYPKTSLLQEYIKSLNLDKNPLMDYRRKSVNPRGNANKTSSAASSKAPPPLSAAQPQPVGNNSQFSMSDRLVPSYDFNEVMPDFCFDENLFEGGCSIDSLLDDIPCAPIMDTSTINVVDVDYKCDDMQQEIVESMMEGDGIIKKEMDLVEMVTKVNKN* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0147 428 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 157 212 IPR017930 -
Ahy20g0147 428 ProSiteProfiles Myb-like domain profile. 157 208 IPR001005 -
Ahy20g0147 428 Gene3D - 216 282 - -
Ahy20g0147 428 Pfam Myb-like DNA-binding domain 217 256 IPR001005 -
Ahy20g0147 428 Pfam Myb-like DNA-binding domain 162 208 IPR001005 -
Ahy20g0147 428 MobiDBLite consensus disorder prediction 250 271 - -
Ahy20g0147 428 MobiDBLite consensus disorder prediction 302 335 - -
Ahy20g0147 428 ProSiteProfiles Myb-like domain profile. 209 259 IPR001005 -
Ahy20g0147 428 SUPERFAMILY Homeodomain-like 159 255 IPR009057 -
Ahy20g0147 428 SMART sant 161 210 IPR001005 -
Ahy20g0147 428 SMART sant 213 261 IPR001005 -
Ahy20g0147 428 CDD SANT 217 259 IPR001005 -
Ahy20g0147 428 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 213 263 IPR017930 -
Ahy20g0147 428 PANTHER MYB PROTEIN-RELATED 103 370 - -
Ahy20g0147 428 MobiDBLite consensus disorder prediction 293 335 - -
Ahy20g0147 428 Gene3D - 161 214 - -
Ahy20g0147 428 CDD SANT 165 208 IPR001005 -
Ahy20g0147 428 PANTHER BNAC07G50190D PROTEIN 103 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0147 Ahy-Chr20 1183589 1185497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0147 53 375 MYB Transcription Factor Family AT4G18770 51.479 8.74e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy20g0147 Myb_DNA-binding 1.10E-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0147 K09422 - gmx:102662267 455.677