Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0120 ATGGGATGCGTCAGCTCCAAGCAGGCGGTCTCCGTCACGCCTGCCATCGACCACTCCGGGGCCTTCCGCCCCAATGCCGCCGACTTTTCCGACACCAACAACAAGAACAACGAGAGGACTGACTCGTCTGTTCTGACTCGGAGTGAGTTGGGCGAGTCAGGTAGGACCAGTTCTACTGCCTGCGAATCCCTCAGCTTCAGGCTCGGAAACCTCCACAAGTACGTCGAGGGAGAGCACGTCGCCGCCGGTTGGCCTGCCTGGCTAAGCGCCGTCGCCGGAGAAGCCATCCACGGCTGGATTCCCCTCCGCGCCGACGCATTCGAGAAACTCGAGAAGATTGGTCAGGGTACTTATAGCAGCGTGTTCAGGGCGAGGGAGCTTGAGACGGGGAAGATAGTGGCGTTAAAGAAGGTCCGGTTCGACAATTTCGAGCCGGAGAGTGTTCGGTTTATGGCGCGGGAGATAACCATTCTGAGGAGGCTTCATCATCCCAACATCATAAAGCTGCAGGGCTTGATCACTTCCAGGTTATCATGCAGCATATACCTTGTTTTTGAGTACATGGAGCATGACATCACGGGCCTCTTGTCAAGTCCTCAGGTCAAATTTACCGAACCTCAGATTAAGTGCTATATGAAGCAGTTGTTGTCTGGTCTCCAGCATTGCCATTCCAGGGGTGTCATGCACCGGGATATCAAGGGATCCAATCTTCTGGTGAATAATGAAGGGATACTCAAGGTGGCTGATTTTGGATTGGCCAACTTCTCCAGTTCTGCCTACAGGCATCCCCTCACCAGTCGAGTTGTCACTTTGTGGTATCGGCCGCCGGAGCTTTTGCTGGGTTCAACGGATTATGGCCCTTCTGTTGATCTCTGGAGTGTTGGCTGCGTTTTCGCTGAGCTACTTGTTGGGAAACCTATACTTCAGGGGAGAACAGAGGTTGAACAATTGCACAAAATCTTCAAGCTTTGTGGCTCCCCGCCTGATGAATACTGGAAAAAGACCAGACTTCCTCATGCGACTTTGTTTAAGCCACAACAAGCATATGATAGTTGCCTCCGACAGTCCTTTAAAGATTTGCCTTCTTCCAGTGTAAATCTGCTGCAAACTCTTCTTTCCGTTGAACCATACAAGCGTGGGACTGCCGCATCTGCTCTCTCATCAGAGTATTTCAAAACAAAACCTCATGCATGTGAGCCATCAAGCTTGCCGACGTACCCGCCTAGCAAGGAAATTGATGCAAAACACAGAGAGGAGTCAAGGAAAAAGGTCACTGGACGAGCTCGTGGAACTGAAAAAAGAAAGCCATCAAGAAAGTCCCTTGGATTCAATAAACTAACTCCAGCAGAGGATTTGGCAAGTCAAACTCAAGCTTCCCAAAAGGTCAATGGTAGATCTGTTTCCATCCTTCAAGAACAAAAGGCTAACACAGGTGAGGAGGAACAAAAGCCAGCTAGTGGTAAACTTGAAGATGCTTCCCATATGAAGAATTCATCTCAAGAAGATATTCCCTTTTCTGGGCCATTACAAGTTTCATCATCAAGTGGCTTTGCATGGGCAAAAAGTCGTAAAGATGACACTTCAATTCGATCCCACTGTCGAACTATTTCGAGAGGACATATTTTCAACCTGTCAGAAACTTCTACACTAAAATCAAGGAATAATTTGGATAACAGAAACCAGGAAAGTAAGGAGTCTTCTGGGAGGCGCACCAACTCTAGGGGCAGCGACCTACTTGACTTATCTAAGATTTCAATGCAGAATCCGTGGAATAGGTTTGATCGCCCAGATTCATTTGATGCTTCCGATGAGTACCATTCGCAAGAACTATCTATGGCACTTTATCATAGAGAAGATTCAGCATCGAAGAGAAGTAATCTGAGTTTTCAGGATCAAGGAGAGAAGGTTGAATATTCCGGACCCCTTCTATCTCAGATGCACACAGTTGATGAGCTCTTAGAAAAACATGAGCGTCATATCCGACGCACAGTTCGAAGATCATGGTTTCAAAGAGCTAAGAAGCATGGGAAGTAA 2034 0.4798 MGCVSSKQAVSVTPAIDHSGAFRPNAADFSDTNNKNNERTDSSVLTRSELGESGRTSSTACESLSFRLGNLHKYVEGEHVAAGWPAWLSAVAGEAIHGWIPLRADAFEKLEKIGQGTYSSVFRARELETGKIVALKKVRFDNFEPESVRFMAREITILRRLHHPNIIKLQGLITSRLSCSIYLVFEYMEHDITGLLSSPQVKFTEPQIKCYMKQLLSGLQHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLANFSSSAYRHPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSVGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKTRLPHATLFKPQQAYDSCLRQSFKDLPSSSVNLLQTLLSVEPYKRGTAASALSSEYFKTKPHACEPSSLPTYPPSKEIDAKHREESRKKVTGRARGTEKRKPSRKSLGFNKLTPAEDLASQTQASQKVNGRSVSILQEQKANTGEEEQKPASGKLEDASHMKNSSQEDIPFSGPLQVSSSSGFAWAKSRKDDTSIRSHCRTISRGHIFNLSETSTLKSRNNLDNRNQESKESSGRRTNSRGSDLLDLSKISMQNPWNRFDRPDSFDASDEYHSQELSMALYHREDSASKRSNLSFQDQGEKVEYSGPLLSQMHTVDELLEKHERHIRRTVRRSWFQRAKKHGK* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0120 677 Pfam Protein kinase domain 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0120 677 MobiDBLite consensus disorder prediction 449 475 - -
Ahy20g0120 677 SMART serkin_6 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0120 677 CDD STKc_CDK9_like 107 391 - -
Ahy20g0120 677 SUPERFAMILY Protein kinase-like (PK-like) 101 396 IPR011009 -
Ahy20g0120 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Ahy20g0120 677 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Ahy20g0120 677 MobiDBLite consensus disorder prediction 557 571 - -
Ahy20g0120 677 Gene3D Phosphorylase Kinase; domain 1 95 189 - -
Ahy20g0120 677 PANTHER CELL DIVISION PROTEIN KINASE 2 670 - -
Ahy20g0120 677 MobiDBLite consensus disorder prediction 395 510 - -
Ahy20g0120 677 MobiDBLite consensus disorder prediction 26 56 - -
Ahy20g0120 677 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 2 670 - -
Ahy20g0120 677 MobiDBLite consensus disorder prediction 476 497 - -
Ahy20g0120 677 MobiDBLite consensus disorder prediction 410 426 - -
Ahy20g0120 677 MobiDBLite consensus disorder prediction 552 581 - -
Ahy20g0120 677 MobiDBLite consensus disorder prediction 23 56 - -
Ahy20g0120 677 Gene3D Transferase(Phosphotransferase) domain 1 190 429 - -
Ahy20g0120 677 ProSiteProfiles Protein kinase domain profile. 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0120 Ahy-Chr20 957051 961570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0120 99 423 Core Cell Cycle Gene Families AT5G10270 50.733 2.27e-114 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Ahy20g0120 Pkinase 7.60E-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0120 - - gmx:100803328 1168.68