Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0119 ATGGCGCTGTTCAAAAAGTTCTTCTACCGGAAGCCGCCGGATCGACTCCTTGAGATCTCCGAGAGGGTCTTTGTATTTGACTGTTGCTTCTCGGCGAATGTGTTGGAAGAAGAAGCATACAGAGATTATATAGGGGAAATAGTAGCACAGCTAAAAAATCAATACTTTACAGATGCTTCAATCATGGTATTCAATTTCAGAGACCGGGAAACGCGGAGCCAGATGTCAGATGTGTTGGCACAATTTGCCATGTTGACGGTTATGGAGTACCCTCGGCAACATGAGGGTTGTCCGCTACTCCCTCTGGAGATGGTGCACCATTTCTTCCGATCAAGTGAAAGCTGGTTGTCTGTGGAGGGGCAGCATAACGTGGTGTTATTGCATTGCGAAAGGGGGGGTTGGCTTGTCTTGGCGTTCATGCTAGCAGGCTTTCTTTTGTACAGGGGGCAGTATACAGGGGAGTTGAAGACTCTTGAAATGATGTACAAGCAAGCATCTAGAGAAGTCTTACGACTCTTTTCTCCTTTGAATCCCCAACCTTCTCAGTTGAGATATCTCCAGTATGTTTCCAGAAGACATTTGGGTTCTGAGTGGCCTCCACAAGAAACGCCCTTGCTTTTGGACTATTTGATCCTCAGAAACCTTCCATTGTTTGATGGTGGAGAAGGTTGCAGGCCTATTGTTCGTGTCTATGGTCCAGACCCTACAAGACCTGCCAATAGTAGCTCTAACATTCTTTTCGAAACTCCAGGTTCCCTCATTCAACACTACCCGCAGGCAGAATGTACGCTCGTGAAAATTGATATCCATTGTCGTGTTCAAGGGGATGTTGTTCTTGAATGCATACATTTGAGTGAAGATTTAGTTGGCGAGGAAATGATTTTTAGAATAATGTTTCATACTGCATTTGTTCGCTCAAACACATTGATCTTGAGTCGTGACGATATTGATATTGTGTGGGATTCAAAGGAGCAGTTCCCCAAGGACTTTAAAGCAGAGGTGCTTTTCTTGGACGCTTATGCTCTTGTACATAATCTATCCCCAATCAACGTAAGTCGAGATGTAAATGACAGTGAAAGTGATTCACCTGATGAGTTTTATGAAGTGGAAGAGATCTTTACGAATGCAATTGATGCATTTGAAGGTAGAGGAGAGTTTGGTTCTCCTATGGTCCGTGATGATAGAAGTCATATAGACATTTGGAAAGATTCTTCAGATCCTCAAGCCTCTACTTCAGATGATGGGAGTCACCAACAGGAGGTTAGAAGGGTAGAATTCGATCCTCAAGCCTCTACTTCAGATGATGGAAATCACCAACAGGAAGTTGAAAGGATAGCCTCTATTTCAGATGATGGGAATCACCAACAGGAGGTTGGAAGGGTAGAATCCGATCCTCAAGCCTCTATTTCAGATGATGGAAATCACCAACAGGAGGTTGGAAGGGTAGAATCCGATCCTCAAGCCGATCCTCAAGCCTCTATTTCAGATGATGGGAATCACCAACAGGAGATTGGAAGGGTAGAATCTGATCCTCAAGCCTCTACTTCAGATGATGGGAGTCACCAACAAGAGGTTAAAAAGGTAGAATTCGATTCTCAAGCCTCTACTTCAGATGATGGGAATCACCAACAGGAGGTTGGAAGGGTAGAATCTGATGTTAACATAGTTAAAGACATTGTTATTGATGATGTCAAATACAAGTTTCAAGAGATGACAGATTCGGATCCTCATGAGGTTAAAGACATTGTTGTCGATGAAGTGGAGATTAAGTCGAATTCAATTGCAGATAAAATGAATTTGCAAGATGAGGTGACAATTATGCACAAAAATTTTGATGAAAAGGAGGAAAAGCATGATCTTTCTATGTCACATTCTGATCATAAACTACATTCATCTACTGAAAAGAAGCATCATTCTCCCAAGTTAAAGATTAAACATCATGAACAACATAGTCACGAACAACATGGTGATGAGGCAAAGCATAACCACGAACAACATGGTGTTGAGGCAAAGCATCACCACGAACAACAGGGTGTTGAGGGAAGACGTCATCATCAGGAACATCATGAACGTCACCCTGAACATCATGGTCACGAGGGAAAGCATGCAAAGGCAAGTGTAGCAGCTAAGTGGATTCCAAGTAACAAGGGTTCTTACCAGGATTCAATGCATGTATATTATCCAGCGTCAAGCCCCCATTACGTACCAACGAGTCCTCGAGGAAGACTACCTACAACAACTCCTCCTCCTCCTCCTCCTCCTCTCCCACCCCCACCCCCTTCAATATCATCTTTTGACCATAGAGACAAGTCTGTTTATCCATCCGTATCTGTAGTTGGGGAATTATCAAATGTAGTCTCCCTTTCTAATTCACCACCACCATCATTAACAACACCACCCCCTCCACCTCCACCACTACCACCACCTTTTTCAAAATATGGAGTTCCAACAATTCCTCCATCTTCCCCTCTCTATATTCCTTTTACACAAGAAGATCCTAGACATCTTCCCTTGCCGACCTCCACTACATTGTTTCAAATTCCACCACCACCACCTTTACCACCATCATCCTTGACTTTACCATCCTTCACTAATGTAGATAGTAATCCACCACCACCCCCTCTTTTACCTGAATGTCTACCAACACAACCTCCATCTCCCTTGATTACATGTCCACCACCGCCACCGCCACCACCGCCACCACCACCACGGCCTCTACCCCCACCCATTTCAAGTAGGGCTTCACCGCCACCACTACATTCTTCTCCATTAAATGAATTACTTGAAACACCACCACCACTATTTCCTTCATCAAGTGGAGCACCACCTATACCACAACCTCCTCCACCAACACCAGCACTTCCTTCATCAAGTGGAGAACCACCTGCTCCTCCATCAAATGCACCACTATCAACACCACCATCCCCTCCGTTATCAAGTGGAGCACCACCACTACCATCACTACTTGCTTCATCAAGTGGTGCACCACCTATACTACCACCAGCTCTTCCTCTATCACACGAAGCAGCAGCACCACCACCATCACTTCCTTCGTTAAGTGTAGCACTACACATGCCACTACCTCGCCCTCCTCCACCAATTTATAGAAATCAACCTCCTCCACCTCCTCCAATGAATGAATCACCCTCTCCTCCACCCACTCCTCCGCCTACTCCTCCGCAACCTCCAATGCATGCTATATCCCCTCTGACAATGCATGCAGCACTATCTCCTCCCCCACCTTCTCCGCCACCTAGTGCTCCTCCCTCACCTCCGAAGCCTGCAGCACTACCTCCTCCACCACCTTCCACGCATGCAGCACTATCACCTTCGGCAGCTCCGAATCATACAACACCACCTCCAATGCATTCAGCACCACCACCTCCGCCACCTCCTCCCCCACCTCCAACGCATTCAGCACCACCACCTCCGCCACCTCTGCCACCTCCTCCCCCACCTCCAATGCATTTGGCACCACCACCTATGCCACCTCAGATGCCTGCAGCACCACCTCCTCCCCCACCTCCAATGCATTCAGCACCACCACCTCCGCCACCTCCTCCCCCACCTCCAATGCATTCAGCACCACCACCTCCGCCACGTCCGCCACCTCCTCCCCCACCTCCAATGCATTTGGCACCACCACCTATGCCACCTCAGATGCCTGCAGCACCACCTCCTCCCCCACCTCCAATGCATTCAGCACCACCACCTCCGCCACCTCCGCCACCTCCTCCCCAACCTCCAATGCATTTGGCACCACCACCTATGCCACCTCCGATGCCTGCAGCACCACCTCCTCCGCCACCTCCTCCCCCACCTCCAATGCATTCAGCACCACCACCTCCGCATGCACCACCACCACCTCCGCCACCTCCGATGCATGCAGCACCACCTCCTCCTCCGCCACCTCCGCCGTCTACAATGCATGCGGCGTCACCTCAGATGCATGGAGCAACACCTCCTCCACCACCTCGGGTAAATGCAGCACCACCACCTCCGCCGCCTCCGATGCATGTAGCGCCACCTCCAGTGCGTGGAGCAGCACCTCCTCCGCCACCTCCTCCACCTCCAATGTCAGGAGCGCCACCACCTCCAATGCCCAGAGCGCCACCACCTCCACCACTTCCAGGAAGCCGCGGCCCACCTCCGCCACCTCCAATGCCCGGAGTGCCACCTCCTCCACCTTCTTCAATTCCCGGAGCACCACCGCCACCTCGAATGCCCGGAGCGCCACCACCTCCACCTCGAATGCCCGGAGCACCACCGCCACCTCCGATGCCAGGAGCGCCACCTCCTCCACCTCGAATGCCCGGAGGGCCTCCACCTCCTCCAATGCCTGGAGCACCTCCGCGAGGACCAGGCCCTCCTCCGCCTCCTCCTCCTGGAGTTGGTGGCCCAGGCCCACCTCCGCCTCCTGGTAGTGCTCCAGGTGGTGGACCTCCACCGCCTCCGTTGGGAAGAGGTGGTGGAGCTGCTAGAGGGCGTGGGCTCACACGTAATACAGCGATGCCTCGACGATCCCCCTTTAAGCCTTTGCATTGGAGTAAGGTTAGCAGGGCAATGCAAGGGAGCTTATGGGAAGAATTGCAAAGAAGTGCGGAACTTCAAACTGCACAAGAGTTTGACGTTTCAGAGCTGGAGAAGCTTTTTTCTGCAAGTGCTCCAAAAGCTGCTGATAAATCTGCCAAATCCAAAGCTGCTGCACCCAAAACTGATAAAGTCCAGTTGATCGATTTACGAAGGGCCTATAATACTGAAATTATGCTCACAAAGGTTAAGATGCCACTTCCTGACATGATGGCAGCAGTGCTAGCCATGGATGAGGCAGTGTTAGATGGTGATCAGGTGGAAAATCTCATCAAATTTTGTCCTACTAAAGAGGAGATGGAAACTTTGAAGGGATACACTGGTGACCCGGAGGCTTTAGGAAAATGTGAACAGTATTTTATGGAGCTGATGAAAGTGCCAAGAGTGGAGGCAAAATTAAGAGTGTTCTCTTTCAAGATTCAGTTTGGGACACAGGCTGAAGACTTCAAGAGCAGTTTAAACACTGTGAACTCTGCCTGTGATGAGGTCCGAAATTCAGTTAAACTGAAGGAGATTATGAAGAAAATTCTTTATTTGGGAAACACATTGAATGAAGGCACTGCAAGGGGAGCTGCAGTTGGGTTCAAGTTGGATAGTCTCTTAAAGCTTACTGACACTCGGGCTACTACCGGTAAAATGACACTGATGCATTATCTTTGCAAGGTCCTGGCTGAAAAGTCTCCATCACTCCTTGATTTTCACCTTGACCTAGTTAACCTGGAAGCAGCCACTAAGATACAATTGAAGATGTTAGCAGAAGAAATGCAGGCACTCATCAAGGGATTAGAAAAGCTTAAACAGGAGCTTGCTGCATCTGAAACTGATGGCCCCGTGTCTGATGTTTTCCGTAAGACACTTAAAGAATTCCTTTCTATAGCGGAGTCGGAGGTGGAATCTGTAACAAACCTATATTCTTCAGCGGGTAGAAATGCAGATGCACTTGCACTATATTTTGGTGAGGATCCAGCTCGCTGTCCATTTGAGCAAGTTACTGCTACTCTCTTGAATTTTACAAGACTGTTCCGAAAATCACATGATGAAAATGTCAAACAAGCGGAGGCAGATAAGAAGAAAGCGGAGAAAGAGGCTGAAATGGAGAGGGAGAAGGCTAAAGCCGGGACGCCAAGAAAGGGAGATGGCCAGACGCCGAGGAAGTTTGATAGAGACATGGATGGCCAGACGCCGAGGAAGTTTGACATGGATGGCCAGACACCGAGGAAGTTCGACATGGATGGCCAGACACCGAGGAAGTTCGATAGAGAGATAGATGCGGAGACACCAAGAAAGGGTGACAAAGAGATGGAAGAAAGCTGA 5904 0.4919 MALFKKFFYRKPPDRLLEISERVFVFDCCFSANVLEEEAYRDYIGEIVAQLKNQYFTDASIMVFNFRDRETRSQMSDVLAQFAMLTVMEYPRQHEGCPLLPLEMVHHFFRSSESWLSVEGQHNVVLLHCERGGWLVLAFMLAGFLLYRGQYTGELKTLEMMYKQASREVLRLFSPLNPQPSQLRYLQYVSRRHLGSEWPPQETPLLLDYLILRNLPLFDGGEGCRPIVRVYGPDPTRPANSSSNILFETPGSLIQHYPQAECTLVKIDIHCRVQGDVVLECIHLSEDLVGEEMIFRIMFHTAFVRSNTLILSRDDIDIVWDSKEQFPKDFKAEVLFLDAYALVHNLSPINVSRDVNDSESDSPDEFYEVEEIFTNAIDAFEGRGEFGSPMVRDDRSHIDIWKDSSDPQASTSDDGSHQQEVRRVEFDPQASTSDDGNHQQEVERIASISDDGNHQQEVGRVESDPQASISDDGNHQQEVGRVESDPQADPQASISDDGNHQQEIGRVESDPQASTSDDGSHQQEVKKVEFDSQASTSDDGNHQQEVGRVESDVNIVKDIVIDDVKYKFQEMTDSDPHEVKDIVVDEVEIKSNSIADKMNLQDEVTIMHKNFDEKEEKHDLSMSHSDHKLHSSTEKKHHSPKLKIKHHEQHSHEQHGDEAKHNHEQHGVEAKHHHEQQGVEGRRHHQEHHERHPEHHGHEGKHAKASVAAKWIPSNKGSYQDSMHVYYPASSPHYVPTSPRGRLPTTTPPPPPPPLPPPPPSISSFDHRDKSVYPSVSVVGELSNVVSLSNSPPPSLTTPPPPPPPLPPPFSKYGVPTIPPSSPLYIPFTQEDPRHLPLPTSTTLFQIPPPPPLPPSSLTLPSFTNVDSNPPPPPLLPECLPTQPPSPLITCPPPPPPPPPPPPRPLPPPISSRASPPPLHSSPLNELLETPPPLFPSSSGAPPIPQPPPPTPALPSSSGEPPAPPSNAPLSTPPSPPLSSGAPPLPSLLASSSGAPPILPPALPLSHEAAAPPPSLPSLSVALHMPLPRPPPPIYRNQPPPPPPMNESPSPPPTPPPTPPQPPMHAISPLTMHAALSPPPPSPPPSAPPSPPKPAALPPPPPSTHAALSPSAAPNHTTPPPMHSAPPPPPPPPPPPTHSAPPPPPPLPPPPPPPMHLAPPPMPPQMPAAPPPPPPPMHSAPPPPPPPPPPPMHSAPPPPPRPPPPPPPPMHLAPPPMPPQMPAAPPPPPPPMHSAPPPPPPPPPPPQPPMHLAPPPMPPPMPAAPPPPPPPPPPPMHSAPPPPHAPPPPPPPPMHAAPPPPPPPPPSTMHAASPQMHGATPPPPPRVNAAPPPPPPPMHVAPPPVRGAAPPPPPPPPPMSGAPPPPMPRAPPPPPLPGSRGPPPPPPMPGVPPPPPSSIPGAPPPPRMPGAPPPPPRMPGAPPPPPMPGAPPPPPRMPGGPPPPPMPGAPPRGPGPPPPPPPGVGGPGPPPPPGSAPGGGPPPPPLGRGGGAARGRGLTRNTAMPRRSPFKPLHWSKVSRAMQGSLWEELQRSAELQTAQEFDVSELEKLFSASAPKAADKSAKSKAAAPKTDKVQLIDLRRAYNTEIMLTKVKMPLPDMMAAVLAMDEAVLDGDQVENLIKFCPTKEEMETLKGYTGDPEALGKCEQYFMELMKVPRVEAKLRVFSFKIQFGTQAEDFKSSLNTVNSACDEVRNSVKLKEIMKKILYLGNTLNEGTARGAAVGFKLDSLLKLTDTRATTGKMTLMHYLCKVLAEKSPSLLDFHLDLVNLEAATKIQLKMLAEEMQALIKGLEKLKQELAASETDGPVSDVFRKTLKEFLSIAESEVESVTNLYSSAGRNADALALYFGEDPARCPFEQVTATLLNFTRLFRKSHDENVKQAEADKKKAEKEAEMEREKAKAGTPRKGDGQTPRKFDRDMDGQTPRKFDMDGQTPRKFDMDGQTPRKFDREIDAETPRKGDKEMEES* 1968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0119 1967 Gene3D Protein tyrosine phosphatase superfamily 13 208 IPR029021 -
Ahy20g0119 1967 MobiDBLite consensus disorder prediction 401 421 - -
Ahy20g0119 1967 MobiDBLite consensus disorder prediction 733 769 - -
Ahy20g0119 1967 MobiDBLite consensus disorder prediction 646 705 - -
Ahy20g0119 1967 SMART PTEN_C2_2 200 1553 IPR014020 -
Ahy20g0119 1967 MobiDBLite consensus disorder prediction 615 633 - -
Ahy20g0119 1967 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 190 IPR029021 -
Ahy20g0119 1967 Coils Coil 1872 1901 - -
Ahy20g0119 1967 ProSiteProfiles C2 tensin-type domain profile. 202 339 IPR014020 -
Ahy20g0119 1967 MobiDBLite consensus disorder prediction 935 983 - -
Ahy20g0119 1967 MobiDBLite consensus disorder prediction 1317 1488 - -
Ahy20g0119 1967 MobiDBLite consensus disorder prediction 843 858 - -
Ahy20g0119 1967 Pfam C2 domain of PTEN tumour-suppressor protein 201 336 IPR014020 -
Ahy20g0119 1967 Coils Coil 1778 1805 - -
Ahy20g0119 1967 MobiDBLite consensus disorder prediction 615 705 - -
Ahy20g0119 1967 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Ahy20g0119 1967 MobiDBLite consensus disorder prediction 447 552 - -
Ahy20g0119 1967 MobiDBLite consensus disorder prediction 1876 1967 - -
Ahy20g0119 1967 PANTHER FORMIN-J 1238 1904 - -
Ahy20g0119 1967 PANTHER FORMIN-J 1 925 - -
Ahy20g0119 1967 MobiDBLite consensus disorder prediction 1074 1107 - -
Ahy20g0119 1967 MobiDBLite consensus disorder prediction 866 916 - -
Ahy20g0119 1967 MobiDBLite consensus disorder prediction 1024 1066 - -
Ahy20g0119 1967 Gene3D Formin, FH2 domain 1519 1908 IPR042201 -
Ahy20g0119 1967 MobiDBLite consensus disorder prediction 785 1516 - -
Ahy20g0119 1967 MobiDBLite consensus disorder prediction 1114 1310 - -
Ahy20g0119 1967 MobiDBLite consensus disorder prediction 742 763 - -
Ahy20g0119 1967 Gene3D - 209 336 - -
Ahy20g0119 1967 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1500 1897 IPR015425 -
Ahy20g0119 1967 SMART it6_source 634 1958 IPR015425 -
Ahy20g0119 1967 MobiDBLite consensus disorder prediction 488 519 - -
Ahy20g0119 1967 MobiDBLite consensus disorder prediction 793 823 - -
Ahy20g0119 1967 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1573 1899 - -
Ahy20g0119 1967 Pfam Formin Homology 2 Domain 1505 1871 IPR015425 -
Ahy20g0119 1967 MobiDBLite consensus disorder prediction 997 1011 - -
Ahy20g0119 1967 MobiDBLite consensus disorder prediction 459 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0119 Ahy-Chr20 945262 954978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0119 515 771 FH2 protein (formin) Gene Family AT5G07740 29.889 3.08e-11 67.0