Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0116 ATGAGGGGTCGTAGGAGGATGAGGAAGATCCGTTTGAGCAAGATCTATTCATTTGCATTATGTGGTAAAGGAACCTTAGAGGGAGAACATTCACAGATTGGGGGGCAGGGTTTTTCCAGGGTGGTGTTCTGCAATGAGGAAGGGGTTATGCAAAATTATTCAGATAATTCTGTAAGATCCACAAAATATACTGCTGTCAGTTTCTTGCCAAAGTCACTGTTTGAGCAGTTTAGGAGGGTTGCTAATTTCTATTTCTTGGTCATTGGTGTCTTGGCAATGACAAAGCTTGCTCCTTACACTGCTGTCAGCGCAATCGTTCCCCTCTGTGTCATCGTTGGGGCGACCATGGTCAAAGAGGGTATCGAAGATTGGCGTCGCAAGACACAGGATATTGAGGTGAACAATAGAAAAGTCAAAGTGCATAAAGGTGATGGTGTTTTTGAATATACCGAATGGAAGAATCTGAGGGTGGGGAATATAGTTAAGGTAGAGAAGGATAATTTTTTCCCTGCAGACCTCCTATTGCTTTCATCCAGTTATGAGGATGCAGTGTGTTATGTTGAGACCATGAACTTAGATGGAGAGACAAATTTGAAGTTAAAACAAGGATTGGACGTAACTTCTTCCTTACAGGACGACTCCAACTTCCGTGATTTTAAGGCTGTAGTTAAATGTGAAGACCCAAATGCAAATTTGTACTCATTTGTTGGGAGCCTGGAGTTTGAAGAGCAAAAATATCCCCTTTCTCCTCAGCAACTTCTTTTGAGAGACTCCAAACTTCGAAATACAGACTATGTATTTGGAGCCGTCATCTTCACTGGTCATGACACCAAGGTCATTCAAAACTCTACTGACCCCCCTTCGAAAAGAAGCAAAATTGAGAGAAAGATGGACAGGATTATTTACTTCTTGTTTTGTCTTTTGTTTCTAATTGCATTTGTTGGATCTATCCTCTTTGGCATTGCAACTAAGGATGACTTGGACAACGGGGTGATGAAAAGATGGTATCTGAGGCCCGATGATTCCACGATATTCTTTGATCCAAAAAGAGTCGCTTCAGCTGCCATATTTCATTTTTTGACTGCTTTAATGTTATACGGCTTCTTCATTCCTATCTCCTTGTATTTTTCTATCGAATTGGTGAAAGTCCTTCAAAGCATCTTCATCAATCAAGATGTCCATATGTACTATGAAGAAGCAGACAAGCCAGCCCATGCCCGCACTTCAAACTTGAATGAGGAACTAGGCCAAGTTGATACTATACTTTCTGATAAAACTGGAACTCTGACCTGCAACTCAATGGAGTTCATCAAATGTTCCATTGCTGGAGTAGCTTATGGCCGAGGTGTTACAGAGGTTGAGCAGGCCATGGATAGAAAAATTGGTTCTCCTTTGACTCATGAGCAGGTTTATGGGACAGAATCAGAATCAGATGAAAACAGGAAGTCTTCTGATAGAAAAACACGCATCAAAGGTTTTAACTTTACGGATGAAAGGATAATGAATGGGAACTGGGTTAATGAGCCTCATGCAGATGTTATACAGAAATTTTTTCGCGTATTGGCAATCTGTCACACCGCCATACCGGAAGTGGATGAAGATACAGGAAATGTCTCATATGAGGCTGAATCTCCAGATGAAGCTGCGTTTGTGATTTCTGCTAAAGAAATTGGTTTTGAATTCTTTAAAAGGACTCAGACTAGTTTATCAGTTAATGAATGGGATCCAGTTTCTGGAAACAAAGTGGAAAGAATGTACCAGCTTCTTAATGTATTAGAATTCAATAGCTCAAGGAAGCGAATGTCGGTAATAGTAAAAGATGAAGAAGGGAGAATTTCGCTACTCTGTAAAGGTGCTGACAGTGTCATGTTTGAAAGGCTTGCCTTGAATGGGAGAGAGTTTGAAGATAAAACCTTGGAGCATGTGCAGCAATATGCTGATGCAGGTCTAAGGACCCTGATACTGGCCTATCGTGAACTTGATGAGAATGAATACAAGGAGTTCAATAATGCATTTTACGAAGCAAAAAATTCAGTTACTGCAGATCAGGAGACGCTAATTGAGGAAGTATCAAATAGAATTGAGAGGAATCTAATCCTTCTAGGTGCCACTGCTGTAGAGGACAAGTTACAAAATGGGGTTCCTGATTGCATTGAAAAGCTTGCTCGTGCTGGAATTAAGATTTGGGTTTTAACTGGGGACAAAATGGAGACTGCCATTAATATTGGTTTTTCCTGTAGTTTGCTTAGACAAGGGATGAGACAGATTATAATTCATTTGGATGCTCCAGAAATTCAAGCATTGGAGAAGGGTGGTGACAAGATGGCTATTTCCAAGGCATCAAGGGAAAGTGTCCACCGTCAGATATCAGAAGCTGCTTTCCAGCTTACTGCATCCAGAGGAGCCTCTCAGCAGGCATTTGCTCTGATTATTGATGGAAAGTCACTTGCATATGCTCTGGACGATAGTATGAAGAACATGTTTCTGGAGCTCGCAATTCGTTGTGCATCAGTTATCTGCTGTCGCTCGTCACCCAAGCAAAAGGCACTGGTTACTAAATTAGTCAAATCTGGAACCCGTAAAACAACTTTAGCTATTGGGGACGGAGCTAATGATGTGGGAATGCTTCAAGAAGCAGATATAGGGATTGGAATCAGTGGTTTCGAAGGGATGCAGATTTGTTACTTTTTCTACAAGAACATCACATTTGGCTTCACTTTATTCTTGTACGAGGTGTATGCATCCTTCTCTGGAGAGCCTGCATACAATGATTGGTTTTTGTCTCTCTACAGTATCCTCTTTTCGTCGCTTCCCGTGATTGCCCTTGGGGTCTTTGATCAGGATGTATCCGCGAGGTACTGTCTAAAGTTTCCTAAATTATACCAACAAGGAGTGCAAAATGTCCTCTTCCGCTGGCGCCGGATCCTCAGCTGGATGCTCAACGGATTCATTAGTGCGACAATGGTTTTCTTCTTTTGCATAAAAGCGATGGAGGTTCAGGCCTTCGATGAAAAGGGAAGAACCGCAGGGCGTGATATATTGGGAGCAACCATGTACACTTGTGTAGTTTGGATTGTGAACCTGCAGATGGCACTTACTATAAGATACTTCACATTGATTCAACACATTTTCATCTGGGGTTCCATTGCTCTGTGGTATCTGTTCCTCCTTGTGTACGGAGCAATGCCTTCCAAGATTTCAGGAAATGCATACAAAGTCTTCATCGAGACGCTGGCTCCTTCACCTTCCTATTGGTTTGTGACATTCTTTGTGGTGTTCTCAACACTTATACCATACTTTTCATACTCAGCAATTCAGATGAAGTTCTTTCCCATGTACCATGAAAGGGTACAGTGGATAAGGTATGAAGGAAAGAAGAAAAACAATGATCCTGAAAACCATGTGTTGCGGCAGAAGTCATTGCAGCTAACAACTATGGGTTCAAATGCAGGTTTTGCAGCTAATGTTAATCATAGTATAGATATAGATACAGATGTAGATAGAACAACCAACAGAAGATGA 3522 0.4148 MRGRRRMRKIRLSKIYSFALCGKGTLEGEHSQIGGQGFSRVVFCNEEGVMQNYSDNSVRSTKYTAVSFLPKSLFEQFRRVANFYFLVIGVLAMTKLAPYTAVSAIVPLCVIVGATMVKEGIEDWRRKTQDIEVNNRKVKVHKGDGVFEYTEWKNLRVGNIVKVEKDNFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLDVTSSLQDDSNFRDFKAVVKCEDPNANLYSFVGSLEFEEQKYPLSPQQLLLRDSKLRNTDYVFGAVIFTGHDTKVIQNSTDPPSKRSKIERKMDRIIYFLFCLLFLIAFVGSILFGIATKDDLDNGVMKRWYLRPDDSTIFFDPKRVASAAIFHFLTALMLYGFFIPISLYFSIELVKVLQSIFINQDVHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVEQAMDRKIGSPLTHEQVYGTESESDENRKSSDRKTRIKGFNFTDERIMNGNWVNEPHADVIQKFFRVLAICHTAIPEVDEDTGNVSYEAESPDEAAFVISAKEIGFEFFKRTQTSLSVNEWDPVSGNKVERMYQLLNVLEFNSSRKRMSVIVKDEEGRISLLCKGADSVMFERLALNGREFEDKTLEHVQQYADAGLRTLILAYRELDENEYKEFNNAFYEAKNSVTADQETLIEEVSNRIERNLILLGATAVEDKLQNGVPDCIEKLARAGIKIWVLTGDKMETAINIGFSCSLLRQGMRQIIIHLDAPEIQALEKGGDKMAISKASRESVHRQISEAAFQLTASRGASQQAFALIIDGKSLAYALDDSMKNMFLELAIRCASVICCRSSPKQKALVTKLVKSGTRKTTLAIGDGANDVGMLQEADIGIGISGFEGMQICYFFYKNITFGFTLFLYEVYASFSGEPAYNDWFLSLYSILFSSLPVIALGVFDQDVSARYCLKFPKLYQQGVQNVLFRWRRILSWMLNGFISATMVFFFCIKAMEVQAFDEKGRTAGRDILGATMYTCVVWIVNLQMALTIRYFTLIQHIFIWGSIALWYLFLLVYGAMPSKISGNAYKVFIETLAPSPSYWFVTFFVVFSTLIPYFSYSAIQMKFFPMYHERVQWIRYEGKKKNNDPENHVLRQKSLQLTTMGSNAGFAANVNHSIDIDTDVDRTTNRR* 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0116 1173 CDD P-type_ATPase_APLT_Dnf-like 55 993 - -
Ahy20g0116 1173 Pfam Cation transport ATPase (P-type) 535 626 - -
Ahy20g0116 1173 Gene3D - 114 284 - -
Ahy20g0116 1173 SUPERFAMILY HAD-like 410 891 IPR036412 -
Ahy20g0116 1173 Gene3D - 567 680 IPR023299 GO:0000166
Ahy20g0116 1173 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 892 - -
Ahy20g0116 1173 SFLD p-type atpase 404 892 IPR044492 -
Ahy20g0116 1173 SFLD C1.7: P-type atpase like 404 892 - -
Ahy20g0116 1173 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 53 892 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Ahy20g0116 1173 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 500 702 IPR023299 GO:0000166
Ahy20g0116 1173 Pfam Phospholipid-translocating P-type ATPase C-terminal 893 1111 IPR032630 -
Ahy20g0116 1173 PRINTS P-type cation-transporting ATPase superfamily signature 866 885 - -
Ahy20g0116 1173 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Ahy20g0116 1173 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 892 - -
Ahy20g0116 1173 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Ahy20g0116 1173 Gene3D - 697 895 IPR023214 -
Ahy20g0116 1173 MobiDBLite consensus disorder prediction 472 488 - -
Ahy20g0116 1173 Pfam Phospholipid-translocating ATPase N-terminal 44 104 IPR032631 -
Ahy20g0116 1173 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 1111 IPR023298 -
Ahy20g0116 1173 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 893 1160 - -
Ahy20g0116 1173 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 893 1160 - -
Ahy20g0116 1173 MobiDBLite consensus disorder prediction 464 488 - -
Ahy20g0116 1173 SUPERFAMILY Calcium ATPase, transduction domain A 137 281 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0116 Ahy-Chr20 912576 918940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0116 10 1154 Primary Pumps ATPases AT1G68710 69.161 0.0 1743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0116 K01530 - gmx:100811892 1870.13