Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0107 ATGTTGTCTCAGTTGTGGCCTCCCCATATTCACACAGCCTCCTTTCTCTTGCCTGAGCTTCACCGGCCTCGTCGTTTTCTTCTGCTGTCGAGCAATGCATATAGACGTACACCTACCTTTCACTTTCGATTAGAAAGGAGAAGAAAACCAGGACCAAGACGAGGCAGCAGCATTTGTTGTTGTTGTGGTTCTGCCTCTGAGTGGGAACTTAAGGAAGCAGGTATAGCCGTGTCAACTTTCCTTCAAGGATTAGGGGTGTCAGAGGAGGAGTCCGTATCCATCGCATCCAAGTCACCCTCTTACTCCAACATGTTGGTGGAGAGTGTCAGGGATTTGGACCAACACTCCATGTGGAATTCCGATTCGGCCTCCTTGGGCTTCAGGGAAAAGCTTCTTCACATTGCCTCCGTCAAAGGTGACAATGGAAAACTCCCTTACTTTGAGAGTCTCGGCTTCACTCACTCTTCATCTATCACTCTTGCTAGGTATCTCTCCTCTCAGAACCTCCCATCCCTCATGCACAAGGTTGCATCCATCAAGGACCTCTTCTTTTCTCATCAAGCTGATCACCTCCTCATCAACAACATTCGTCGCATGATGCTCCACCTGTCCATTCCAATCGACGATGATCTACAACATATTCTCTCCTTCTTTGAGAAGCTTGAAGCCAGGCGTGGAGGCTTAAATGTCTTGCTCTCTGACAAAGACACTGCCTTTCGCCATTTGATTGATTCCTTTCCTCGTTTACTTTCACTCTCACTGGATAACCACATCGTTCCTATTATCGATTTTCTCCACAATATTGGAGTTCCCAGAGTTCACATCACAACCATAATACTCTCTTTTCCGCCTATTCTGTTCTGGAATATTCAACTCCTTAAAGCTAGACTCCTCGCCTTGAAACAGATTCATGTGGTGGATAAAGATTATATCAAGTTGTTGATCAGATATCCTTGGGTTCTATCTACAAGCATTCAAGAGAACTATGAGGAGGTTCATGGATTTTTTCTTTCTGAGAAGGTTAGAAAGATATGTATTGACTCTGCAATCAGAGGCCAACCATACCTGTTGGGTTGTTCAACAAGCAAGCTGAAGTCGATGCTGGATCAGTTGGCTGATCTTGGAGTTAAGGGAAATAAGTTAGATAGAGTTATTGCTAGAAGCCCGCAGCTACTATTGCGGAAGCCCAGAGATTTTCTACAGGTTGTTCTGTTCTTTGAAAATATGGGCTTGGATAGAGAAATTGTTGGGAGAATTCTTTCTCGCTGCCCAGAAATTTTCGCTGCCAGCATCAATAAAACTCTTAAGAGGAAGATTGAATTCCTTTCTGGGGTTGGCGTTTCGGAAGCATATCTTCCTGGGGTAATCAGAAAGTATCCGGAATTACTTCTAACGGACACTGATAAAACCATACTGCATCGGCTGATGTACCTGATGAAGTTAGGACTTTCGGAGAAAGAGATTGGGTTTATGGTGCGCACGTTTTCTCCGCTCCTCGGGTACAGTATAGAGGAGGTTTTGAGGCCAAAAATAGAATTCTTGGTGAAGTCGATGGGGAGGCCGGTACGAGAAGTTGTCGATTACCCTCGGTATTTTAGCTATTCATTAGAAAAAAAGATAAAGCCAAGATACTTTGTACTCAAGGGAAGGCACATTGAATGTAGTTTAAAGGATATGCTGGGAAAAAATGATGAGGAATTTGCTGCAGAATTTATGGGTGTGGGTCTTGGAGGGATGCTTGACCCTCCTCTCTGTTCTGAGAATGTGTTGGATTGTTGA 1779 0.4429 MLSQLWPPHIHTASFLLPELHRPRRFLLLSSNAYRRTPTFHFRLERRRKPGPRRGSSICCCCGSASEWELKEAGIAVSTFLQGLGVSEEESVSIASKSPSYSNMLVESVRDLDQHSMWNSDSASLGFREKLLHIASVKGDNGKLPYFESLGFTHSSSITLARYLSSQNLPSLMHKVASIKDLFFSHQADHLLINNIRRMMLHLSIPIDDDLQHILSFFEKLEARRGGLNVLLSDKDTAFRHLIDSFPRLLSLSLDNHIVPIIDFLHNIGVPRVHITTIILSFPPILFWNIQLLKARLLALKQIHVVDKDYIKLLIRYPWVLSTSIQENYEEVHGFFLSEKVRKICIDSAIRGQPYLLGCSTSKLKSMLDQLADLGVKGNKLDRVIARSPQLLLRKPRDFLQVVLFFENMGLDREIVGRILSRCPEIFAASINKTLKRKIEFLSGVGVSEAYLPGVIRKYPELLLTDTDKTILHRLMYLMKLGLSEKEIGFMVRTFSPLLGYSIEEVLRPKIEFLVKSMGRPVREVVDYPRYFSYSLEKKIKPRYFVLKGRHIECSLKDMLGKNDEEFAAEFMGVGLGGMLDPPLCSENVLDC* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0107 592 Gene3D Transcription termination factor 3, mitochondrial 346 576 IPR038538 -
Ahy20g0107 592 PANTHER TRANSCRIPTION TERMINATION FACTOR 4, MITOCHONDRIAL 393 574 - -
Ahy20g0107 592 PANTHER TRANSCRIPTION TERMINATION FACTOR 4, MITOCHONDRIAL 41 396 - -
Ahy20g0107 592 Pfam mTERF 262 568 IPR003690 GO:0003690|GO:0006355
Ahy20g0107 592 PANTHER CGI-12 PROTEIN-RELATED 393 574 IPR003690 GO:0003690|GO:0006355
Ahy20g0107 592 PANTHER CGI-12 PROTEIN-RELATED 41 396 IPR003690 GO:0003690|GO:0006355
Ahy20g0107 592 SMART mt_12 311 342 IPR003690 GO:0003690|GO:0006355
Ahy20g0107 592 SMART mt_12 453 484 IPR003690 GO:0003690|GO:0006355
Ahy20g0107 592 SMART mt_12 489 521 IPR003690 GO:0003690|GO:0006355
Ahy20g0107 592 SMART mt_12 347 377 IPR003690 GO:0003690|GO:0006355
Ahy20g0107 592 SMART mt_12 417 448 IPR003690 GO:0003690|GO:0006355
Ahy20g0107 592 SMART mt_12 382 412 IPR003690 GO:0003690|GO:0006355
Ahy20g0107 592 SMART mt_12 522 553 IPR003690 GO:0003690|GO:0006355
Ahy20g0107 592 SMART mt_12 240 271 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0107 Ahy-Chr20 868110 876193 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy20g0107 mTERF 4.00E-90 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0107 K15032 - gmx:100802127 680.633