Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0105 ATGGAGATTGGTTCTCTTAAAGAACTTCAATGGTTATGGTTGGCCAAGAATCATTTATCAGGGAAGATACCATATTCCATATGGAATCTTTCATCCCTTGTTGTACTTTCTCTTTCATATAACAACTTGGAGGGAAAGTTACCACAAAACATTGGCAACTTAAAACATTTGCAAATTCTTGGTATGGTTTCCAACAAATTATGTGGTATGCTTCCTTATTCTCTTTACAATGTGTCATCTCTTACTTACATCTCGGCCGCGAACAACCACTTTAACGGCTCTCTTCCGGCCGACATGTTCTTCTCCCTCCCTAGGCTCCAACTTTTTGAAATTGGAAGCAACCAAATGTCAGGTTCAATCCCTGTTTCAATCACCAATGCAACCTCTCTTAGAAGATTTGATGTCACTAATAATAGTTTTTTAGGGGAAGTTCCAAGTCTAGCAAAGTTGCATGATCTTTGGTGGTTGAATTTTGGTTCCAACTATCTAGGAAGTTATTCACTTAAGGACTCTGAGTTCTTAGAATCTTTGCAAAATTGTAGTAAGTTGGAAATATTGGACATATCCGCCAACAATTTCGCTGGCCGTTTGCCGGAAAATATAGCCAACTTTTCCGACCGGCTCAGAGAAATATACCTTAGTGATAACCTATTGTTTGGAGAAATTCCTGCCACTTTAGGAAATCACATTAATTTAGATGTCCTTACCATGGAACTCAACTTTTTTGTAGGATCAATTCCAACAACATTTGTAAAGTTTCAAACAATGAAAAGATTGGATTTGAGTTATAACAAAATCTCAGGACAAATTCCACCCTTTATAGGGAATCTTAGCCAATTGCTTGAGCTAAGAATCTCAGACAACATGCTAAGAGGAAACATTCCTCCAAGTATAGGAAATTGCAAAAGTTTAGAAATTCTAGACCTTGCAACTAACAATCTTAGTGGAGTCATACCTCCAGAAGTTATAGGTCTTTCTTCTTTGACAGTCCTACTAAACTTGTACGAAAACTCGTTGACCGGATACCTTCCGGGACAAGTAAGCCTGTTGAAATTTATTCGTCAGTTGGACGTCTCGAAAAATTATCTGTCTGGCGAAATTCCTGAGAATATTGGAGAGTTGGTAAACCTCGAGTACCTTAACTTACAAGGTAATTCATTCAATGGAACCATACCTTCATCTTTGGCTATGGTGAAGAGTCTCCAACATTTAGACCTATCAAGAAACAACTTGTCTGGATCGATTCCAACCGCGCTACAAGATCTATCTCTTCTAGAATACTTAAATGTTTCTTTCAACATGTTGGATGGTGAAGTTCCAAGAAAAGGTGTGTTTGGAAATTCAACTGCTATAACACTATTTGGTAATGTTAAGCTTTGTGGAGGAATCTCTGAGCTGAAGTTACCACCATGCCACGGTTCAAAACAACCAAGACATCATAGTTTCAAGGACACAGCAGTGATGATAGTTTCTATGGTTGCTTTTCTTGTTCTGTTGTGTTCTATGTTTGTTGCTTATATGATGAGGATAAGAAAGAATGAACCAATTTCAGATTCATCAGCATTAAATGACTTATTTGAAAAGGTGTCATATCAAAGACTTCACCAAGCAACTAATGGTTTCTCAGCTAGCAACTTGATAGGGTCTGGAAATTTCGGCTTTGTTTACAAAGGAAATCTCGCCTCGACTAACAAAGTTGTTGCTATAAAGGTCTTAAACCTTCAAAAGAAAGGAGCTCGAGCGAGTTTCATGGCCGAATGCAATGCACTGAAACACATTAGCCATCGAAATTTGGTTAAGATTCTAACCTGTTGCTCGAGTACAGATCACAACGGCCGAGAATTCAAAGCTCTGGTGTTCAAATACATGGAAAATGGAAGCTTGGATAAATGGTTGCATCCAGATATTGAAAGATTAGAAGTGCCACAAACCTTGATGAGTCTAAACCAAAGAATAAGGACTCTAACTGATGTTGCTTCAGCAATAAGCTATCTTCACTACGAATGCGCGCAGCCTATTGTTCATTGCGATTTAAAGCCGAGCAATATTCTTCTAGATGATAACATGGTTGCTCATGTTGGTGACTTTGGATCTGCAAGATTTCTGTCAAAAATCAATGACAAATCATATAAGCAAAATATCATATCCAGAATAAATGGTACTATTGGTTATACTCCTCCAGAGTATGGAATGAGTTCAGAGGTGTCGAAACAAGGCGACACGTATAGCTTTGGGATTCTTGTTTTGGAAATGTTAACAGGAAGAAGACCTACTGAGGAAACTTTTCAACTTGGTCACAATCTCCATAGCTATGTAAGGATGGCATTTCCAGATAAACTCTTGCAGATTGTAGATCCAATTCTTCTGTCCATAGAAATAGAAGGAACAACAGCAAAGAAATGTTTGTATTCACTCTTTAGAATTGGACTTGCTTGTTCTGTGGAGTCACCAAAAGAAAGAATGAGCATGGAGTGTGTTAGCAGAGAACTAAACCTTATAAAGAATTCCTTATAA 2514 0.3791 MEIGSLKELQWLWLAKNHLSGKIPYSIWNLSSLVVLSLSYNNLEGKLPQNIGNLKHLQILGMVSNKLCGMLPYSLYNVSSLTYISAANNHFNGSLPADMFFSLPRLQLFEIGSNQMSGSIPVSITNATSLRRFDVTNNSFLGEVPSLAKLHDLWWLNFGSNYLGSYSLKDSEFLESLQNCSKLEILDISANNFAGRLPENIANFSDRLREIYLSDNLLFGEIPATLGNHINLDVLTMELNFFVGSIPTTFVKFQTMKRLDLSYNKISGQIPPFIGNLSQLLELRISDNMLRGNIPPSIGNCKSLEILDLATNNLSGVIPPEVIGLSSLTVLLNLYENSLTGYLPGQVSLLKFIRQLDVSKNYLSGEIPENIGELVNLEYLNLQGNSFNGTIPSSLAMVKSLQHLDLSRNNLSGSIPTALQDLSLLEYLNVSFNMLDGEVPRKGVFGNSTAITLFGNVKLCGGISELKLPPCHGSKQPRHHSFKDTAVMIVSMVAFLVLLCSMFVAYMMRIRKNEPISDSSALNDLFEKVSYQRLHQATNGFSASNLIGSGNFGFVYKGNLASTNKVVAIKVLNLQKKGARASFMAECNALKHISHRNLVKILTCCSSTDHNGREFKALVFKYMENGSLDKWLHPDIERLEVPQTLMSLNQRIRTLTDVASAISYLHYECAQPIVHCDLKPSNILLDDNMVAHVGDFGSARFLSKINDKSYKQNIISRINGTIGYTPPEYGMSSEVSKQGDTYSFGILVLEMLTGRRPTEETFQLGHNLHSYVRMAFPDKLLQIVDPILLSIEIEGTTAKKCLYSLFRIGLACSVESPKERMSMECVSRELNLIKNSL* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0105 837 Pfam Protein kinase domain 543 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0105 837 ProSitePatterns Protein kinases ATP-binding region signature. 547 570 IPR017441 GO:0005524
Ahy20g0105 837 Gene3D Ribonuclease Inhibitor 149 480 IPR032675 -
Ahy20g0105 837 SUPERFAMILY L domain-like 206 461 - -
Ahy20g0105 837 SUPERFAMILY Protein kinase-like (PK-like) 518 830 IPR011009 -
Ahy20g0105 837 ProSiteProfiles Protein kinase domain profile. 541 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0105 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 673 685 IPR008271 GO:0004672|GO:0006468
Ahy20g0105 837 ProSiteProfiles Leucine-rich repeat profile. 400 423 IPR001611 GO:0005515
Ahy20g0105 837 Pfam Leucine rich repeat 376 435 IPR001611 GO:0005515
Ahy20g0105 837 PANTHER OS04G0122200 PROTEIN 1 836 - -
Ahy20g0105 837 SUPERFAMILY RNI-like 3 267 - -
Ahy20g0105 837 PANTHER LRR RECEPTOR-LIKE KINASE 1 836 - -
Ahy20g0105 837 Gene3D Ribonuclease Inhibitor 101 148 IPR032675 -
Ahy20g0105 837 Gene3D Phosphorylase Kinase; domain 1 502 622 - -
Ahy20g0105 837 Gene3D Transferase(Phosphotransferase) domain 1 623 837 - -
Ahy20g0105 837 SMART LRR_typ_2 422 447 IPR003591 -
Ahy20g0105 837 SMART LRR_typ_2 374 397 IPR003591 -
Ahy20g0105 837 SMART LRR_typ_2 277 301 IPR003591 -
Ahy20g0105 837 SMART LRR_typ_2 30 54 IPR003591 -
Ahy20g0105 837 SMART LRR_typ_2 398 421 IPR003591 -
Ahy20g0105 837 Pfam Leucine Rich repeat 254 268 IPR001611 GO:0005515
Ahy20g0105 837 SMART serkin_6 541 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0105 837 Gene3D Ribonuclease Inhibitor 1 100 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0105 Ahy-Chr20 851846 854443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0105 2 834 Receptor kinase-like Gene Family AT3G47570 44.024 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Ahy20g0105 Pkinase 7.10E-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0105 - - ahf:112783139 1652.11