Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0099 ATGACAAATGATTCTGAACAACTTCGACAGATTGGAATTTGGGGCATGGGTGGCATAGGTAAGACAACCATTGCTCAACTTGTGTTTGACAAATTTTCTCACCAATATGAGGGCTGCTACTTCTTGGAGAATATAAGAGATGAACTGAAAAATAATCAGTTAAATTATTTAAGAGACGAAGTTGTTTCTAAGCTATTAGGGGAAGAAAATCACCATATAACTGGTGCAAGCAGGGCAAATTCCTCCACCATGAGGAGGCTAAGTAAGAAGAAGGTTCTCCTTGTGGTAGATAATGTGAATACTCCAAAGCTTCTAAGAGATTTTCTTGAACCAATTCACTTTGGGCCAGGGAGTAGAGTGATTGTAACTAGCAGAAATAAGCAAGTGTTTACTGCAGGAGTATTTCATGAAATACACCATGTCAAGGAGCTGAACTCTGAAGAATCCCTTGAACTCTTCTGCTTAAATGCCTTCAATGAAAGCCAACCCAAAAGGGGATTCGAAGAGCTATCTAGAGAGGCAGTTGCTATTGCCAAGGGTGTCCCATTAGCTTTAATAGTTTTTGGTTCATATTTCCATTCTAAAAGTAATGACATATGGAAATGTGCCTTAGAAAGATTCAAGAAGTATACTGATCCTGATGGGGAAATTCAAAGTGTGTTGAGGTTTAGTTATGATGAATTACATGACATAGAGAAAAAGGTTTTTCTAGATATTGCATTCTTTTTCAAAGGAGAAGATAAAGATTATGTCATAAGCCAGCTGGATGCTTGGAACTTTCATGGAGCTAGTGGAATAGCCTCTCTCCAAGAGAAAGCTCTTATAGCCATTTCAAAGGACAATAAAATACAAATGCATGATTTAATGCAAAGAATGGGTTGGGAAATCGTTCGTCAAGAATCTGCTAATCCCGGACGACGAAGCCGAGTGAATGATCCAGAGGAAGTGTATGACATATTGAAGAATAACAAGGGAAGTGATTCAGTGGAAGGCATACTGTTAGATTTATCTCAAATCGGAGAGGTAGCCTTGAATGTTGACAGCCTTAAAAAGATGCCTAATCTAAGATTAATCAAGGTTTACTCTCCATTGCCTATTGAGGTTCCTATGCAAATTAGATATTTTATACCACAGGATTTTCTCAGTGTGCTTTACAAAAGAATAAAAATGGATGACTTGACAGAAGAGTTATTGGAAGAATCTGGAAGCTTGAATCAATCATGTGATAATGAGGATATCGATGATGTCGTTGAAACTATCAAGGGAACTCAAGTAGATGGCATAAAAATTCTTGATACTATTATAGAGATGCATATTTTGGGAATGCCTAAATTAAACATGCCGATGCATGTGGAGCATCCTATGCCTGGTTTGCCGATAATGCAGGTGATAAGAATACATTGTTTTGAATTATTCTTAGAGGAGTGTTAG 1431 0.3753 MTNDSEQLRQIGIWGMGGIGKTTIAQLVFDKFSHQYEGCYFLENIRDELKNNQLNYLRDEVVSKLLGEENHHITGASRANSSTMRRLSKKKVLLVVDNVNTPKLLRDFLEPIHFGPGSRVIVTSRNKQVFTAGVFHEIHHVKELNSEESLELFCLNAFNESQPKRGFEELSREAVAIAKGVPLALIVFGSYFHSKSNDIWKCALERFKKYTDPDGEIQSVLRFSYDELHDIEKKVFLDIAFFFKGEDKDYVISQLDAWNFHGASGIASLQEKALIAISKDNKIQMHDLMQRMGWEIVRQESANPGRRSRVNDPEEVYDILKNNKGSDSVEGILLDLSQIGEVALNVDSLKKMPNLRLIKVYSPLPIEVPMQIRYFIPQDFLSVLYKRIKMDDLTEELLEESGSLNQSCDNEDIDDVVETIKGTQVDGIKILDTIIEMHILGMPKLNMPMHVEHPMPGLPIMQVIRIHCFELFLEEC* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0099 476 PRINTS Disease resistance protein signature 86 100 - -
Ahy20g0099 476 PRINTS Disease resistance protein signature 178 192 - -
Ahy20g0099 476 PRINTS Disease resistance protein signature 10 25 - -
Ahy20g0099 476 Pfam NB-ARC domain 3 225 IPR002182 GO:0043531
Ahy20g0099 476 Gene3D - 1 134 IPR027417 -
Ahy20g0099 476 Gene3D - 143 229 IPR042197 -
Ahy20g0099 476 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 370 IPR044974 GO:0006952
Ahy20g0099 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 239 IPR027417 -
Ahy20g0099 476 SUPERFAMILY "Winged helix" DNA-binding domain 216 314 IPR036390 -
Ahy20g0099 476 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 6 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0099 Ahy-Chr20 795283 810867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0099 8 365 WRKY Transcription Factor Family AT5G45050 34.133 7.59e-55 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0099 - - ahf:112782926 935.25