Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0076 ATGAGTGGCACATATGCTGAGAATTATCTTAGTGAGGTGTTTAACATACATAGATCAAGGCTTGTTCCTTTCAATTCTCTATCTGAATTTGAGAAGGCTTTGAAGGATGGACAAGACAATGGTGGTGTTGCTGCTATCATAGCTGAGCGTGCATACATGGAATTGTTCCTATCAACTAGATGTCAATTTGGTATTGTTGGTCAAGAATTCACCAAAATGGGATGGGGCTTTGCCTTTCCAAGGGACTCTCCCTTAGCAATTGACATGTCAACAGCTATTCTAAAACTATCAGAGAATGGTGATCTTCAAAGGATTCATGACAAATGGTTAACAAGAAGTGCTTGTAGCTCAGAAGGTGCAAAACAAGGCATTGATAGGCTTGAGACTAAGAGCTTTTGGGGCCTCTTCCTTCTTATTGGCATTGCATGCTTCATTGCCCTCCTTTGCTATCTTATTAGAATGACCTACCGTTTTAGGAGGCACTACTACTCCAATAGTACCAACCTTGAAGTCCCATCATCATCATCATCATCATGCTCTTCTTGTCTTAAATCATTCTTTTCTTTTGTCAATGAAAAGGAAAAGTAA 588 0.3963 MSGTYAENYLSEVFNIHRSRLVPFNSLSEFEKALKDGQDNGGVAAIIAERAYMELFLSTRCQFGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLETKSFWGLFLLIGIACFIALLCYLIRMTYRFRRHYYSNSTNLEVPSSSSSSCSSCLKSFFSFVNEKEK* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0076 195 Gene3D - 3 79 - -
Ahy20g0076 195 Pfam Bacterial extracellular solute-binding proteins, family 3 3 111 IPR001638 -
Ahy20g0076 195 SMART GluR_14 1 112 IPR001320 GO:0015276|GO:0016020
Ahy20g0076 195 SUPERFAMILY Periplasmic binding protein-like II 2 113 - -
Ahy20g0076 195 PANTHER GLUTAMATE RECEPTOR 2 194 - -
Ahy20g0076 195 Gene3D - 80 109 - -
Ahy20g0076 195 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0076 Ahy-Chr20 628765 630404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0076 3 195 Ion Channels AT3G51480 57.513 2.20e-71 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0076 K05387 - ahf:112782449 386.341