Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0055 ATGCACTTGGTGTTGCGCCACACCATGACGCTTCCTACTGATTCGGAACCGCCACCACCTTCTCCTCCTCCACCGGATTCCGCCACCGACACCGCCACCGCCACAGAAAACGGAGCAACCACCACCACCCCCACCTCCTCCTCATCTTCCGAAAATCCACCGGATTCCCTGCCTACACCGCCGCAAGAGCTCCAACTCCCAATTTCATGGCCGCAAGACGGAACCTTGAGCGTCGAATGGATCCACAATCTGATGCAGTGCTTCGATTGGTCTTCGAGGAACTTTCCTCCTTCCGAGTTCCCTTCCGTTCTTCCCGTTCAGGTATTCGACTCTCTCATCCTCGTTGCTTCCAAGATGCTCCATAAGGAACCCAATTGCGTCACCGTTGATCCGTTTCGCCCTAATTCCGGCACGACGGCGTCGGTGGTGGTCGTTGGTGACGTTCACGGGCAGCTGCATGATCTGCTTTTTCTCCTCAAAGACGCAGGTTACCCTTCCGATGATCGAATCTTCGTCTTCAATGGTGATTACGTTGATCGTGGAGCTTGGGGGCTCGAAACTTTCATGCTCTTGTTAGCTTGGAAGGTGTTTATGCCTCATAATGTATATCTGCTACGTGGGAATCACGAATCAAAATACTGCACATCGGTCTATGGTTATGAGAAGGAAGTGATGGCAAAGTATGGTGATAAAGGTAAGCATGTGTATCGCAAATGCTTGGGATGCTTTGAGGGTCTTCCTTTGGCTTCCATTGTAGCAGGGTGTGTATTCACAGCTCATGGAGGACTCTTCCGCAGTGTAACAGTGACGCCATCAAAGAGATTAAAAGGGAAGAAGAACAGAAAGATTCATCTTAATCATGATAACAAAACTTTAACTCTTGGTTCCTTGGAAGAATTGTCTAAGGCCCGACGGTCAGTTCTTGATCCTCCTTGGGAAGGCCCAAACTTGATTCCTGGTGATGTTTTGTGGTCTGATCCATCGAAAAATCCTGGTCTTGCCCCGAACAAAGAGAGAGGCATTGGCTTGTTGTGGGGTCCCGATTGTACTGAAGAATTTTTGAAGAAGTATCAATTAAAGGCAACAGAGGAGAGGTATAACAACAAAGGAGCCTATGTTGTTCTTGAACCCCCAAATTTTGACAATGCCATATTTCATGGATTTACAGCAGTTACTCCAAGGCCAAAGGTGAATGCCTATTATAATTTTGAAGAGGTGATAGATTCTGACGAAGAATTGGACTTGGAGTCCATGGTGACTTCTTGA 1266 0.4795 MHLVLRHTMTLPTDSEPPPPSPPPPDSATDTATATENGATTTTPTSSSSSENPPDSLPTPPQELQLPISWPQDGTLSVEWIHNLMQCFDWSSRNFPPSEFPSVLPVQVFDSLILVASKMLHKEPNCVTVDPFRPNSGTTASVVVVGDVHGQLHDLLFLLKDAGYPSDDRIFVFNGDYVDRGAWGLETFMLLLAWKVFMPHNVYLLRGNHESKYCTSVYGYEKEVMAKYGDKGKHVYRKCLGCFEGLPLASIVAGCVFTAHGGLFRSVTVTPSKRLKGKKNRKIHLNHDNKTLTLGSLEELSKARRSVLDPPWEGPNLIPGDVLWSDPSKNPGLAPNKERGIGLLWGPDCTEEFLKKYQLKATEERYNNKGAYVVLEPPNFDNAIFHGFTAVTPRPKVNAYYNFEEVIDSDEELDLESMVTS* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0055 421 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 363 418 - -
Ahy20g0055 421 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 39 360 - -
Ahy20g0055 421 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 39 360 - -
Ahy20g0055 421 SMART pp2a_7 104 395 IPR006186 GO:0016787
Ahy20g0055 421 MobiDBLite consensus disorder prediction 13 27 - -
Ahy20g0055 421 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 363 418 - -
Ahy20g0055 421 PRINTS Serine/threonine phosphatase family signature 141 168 IPR006186 GO:0016787
Ahy20g0055 421 PRINTS Serine/threonine phosphatase family signature 171 198 IPR006186 GO:0016787
Ahy20g0055 421 PRINTS Serine/threonine phosphatase family signature 301 328 IPR006186 GO:0016787
Ahy20g0055 421 PRINTS Serine/threonine phosphatase family signature 204 228 IPR006186 GO:0016787
Ahy20g0055 421 PRINTS Serine/threonine phosphatase family signature 241 267 IPR006186 GO:0016787
Ahy20g0055 421 ProSitePatterns Serine/threonine specific protein phosphatases signature. 205 210 IPR006186 GO:0016787
Ahy20g0055 421 Pfam Calcineurin-like phosphoesterase 141 361 IPR004843 GO:0016787
Ahy20g0055 421 MobiDBLite consensus disorder prediction 1 68 - -
Ahy20g0055 421 Gene3D - 99 414 IPR029052 -
Ahy20g0055 421 SUPERFAMILY Metallo-dependent phosphatases 101 391 IPR029052 -
Ahy20g0055 421 MobiDBLite consensus disorder prediction 28 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0055 Ahy-Chr20 460108 463554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0055 67 362 Calmodulin-binding Proteins AT5G63870 69.697 5.86e-157 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0055 K04460 - gmx:100810695 662.144