Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0044 ATGGGGTGGAGCAACAGTAACAACAATGAGATATGGAAGGCGCATGGGGCCATGGCCATGGTTCAGCTCTTCAGCGGTGGCTATCACGTAATTACCAAATTAGCCCTCAACGTTGGCGTCAACCAGATCGTCTTCTGCGTCTTCCGCGATCTCCTCGCCCTCTCCATCCTCGCCCCTCTCGCCTTCTTCCGTGAAAGACGCACGCGCCCTCCCCTCACCAAGCACCTCCTCTTCTCCTTCTTCTTTCTTGGATTAACCGGGATATTTGGGAACCATCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCAACTTATGCTGCTGCAATACAGCCAGCCACTCCGGTTTTTACATTTCTCTTTGCTGTAATCATGGGCACAGAAAGAGTGAATTTGCTAAGATATGAGGGTTTGGCCAAGCTTGGTGGAACTCTTGTCTGTGTTTTTGGTGCTATTTTGATGGTTTTGTACCGAGGTCCGGCTGTCGTAGGGTATGCCGAAATGGACTTTGTTTCGCATAATGAAATCAGTGCTAAAGGTCAACCAGAGCCTTCTGGATGGTTGGTTACTGGTTTAATGGATCTTGGACTCGATCATTTTCATCTTGGGGTTCTGTGTTTCATAGGGAACACCTTGTGCATGGCTGCTTTTCTTGCCATTCAGGCACCAATACTAAAAAAATATCCTGCAAACTTATCTGTCATTGCATTTTCATACTTCTTCGGAGCTCTACTAATGGTGATCACATCAATGTTCGTGACAAATGAGGCGACCGACTGGATTTTGACGCAGTCTGAGACACTTGCTGTTATTTATGCTGGTGTTATCGCATCTGCCCTTAACTATGGACTGATTACATGGTGCAACAAGATACTAGGGCCAGCAATGGTTGCTCTTTATAATCCACTTCAACCTGGTGCTTCTGCTCTCTTGTCTAGAATTTTCCTTGGAAGTCCAATTTACATGGGAAGCATTCTTGGAGGTTCTTTGATTATTACTGGTTTGTATGCTGTTACATGGGCATCATTTAGAGAAAGACAAGCATCAAGTGGAGTTCTTCCTCATCATCATCATCATCATCATCATCATCATCATCATCATCATGGATCTTGGGTCTCTGATGACAAGAGTTCATATCAGAGAGGTCTCATCCTCCCCAGCTTAACTCCAAAGCCTTCTGATTAA 1185 0.4473 MGWSNSNNNEIWKAHGAMAMVQLFSGGYHVITKLALNVGVNQIVFCVFRDLLALSILAPLAFFRERRTRPPLTKHLLFSFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAIQPATPVFTFLFAVIMGTERVNLLRYEGLAKLGGTLVCVFGAILMVLYRGPAVVGYAEMDFVSHNEISAKGQPEPSGWLVTGLMDLGLDHFHLGVLCFIGNTLCMAAFLAIQAPILKKYPANLSVIAFSYFFGALLMVITSMFVTNEATDWILTQSETLAVIYAGVIASALNYGLITWCNKILGPAMVALYNPLQPGASALLSRIFLGSPIYMGSILGGSLIITGLYAVTWASFRERQASSGVLPHHHHHHHHHHHHHHGSWVSDDKSSYQRGLILPSLTPKPSD* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0044 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Ahy20g0044 394 PANTHER WAT1-RELATED PROTEIN 12 385 IPR030184 GO:0016021|GO:0022857
Ahy20g0044 394 MobiDBLite consensus disorder prediction 353 369 - -
Ahy20g0044 394 MobiDBLite consensus disorder prediction 352 375 - -
Ahy20g0044 394 Pfam EamA-like transporter family 202 339 IPR000620 GO:0016020|GO:0016021
Ahy20g0044 394 Pfam EamA-like transporter family 20 138 IPR000620 GO:0016020|GO:0016021
Ahy20g0044 394 PANTHER WAT1-RELATED PROTEIN 12 385 - -
Ahy20g0044 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 259 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0044 Ahy-Chr20 363142 365779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0044 97 350 Nodulin-like Gene Family AT5G45370 66.535 1.20e-120 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0044 - - gmx:100809051 612.838