Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0026 ATGGCGGATGGTGATGATGGTGGGGGTGGTGGTTTTTTATTCAATAGCAATGTTAGTTCCGTGCTAGCTGGCATGGGTTCAGCTTTGATTGTGCTGCTACTATACCGATGCATGTCCATGTTCTTGTGCATCCGCCATCCTCTCACAACTGAACAAGAGCAGGCTCGGTCCCCGCCGGCCGGCACCCAATCTAGTACTTTGATGAATTCGGTGGCGCATATGATCCCATCCCACAAGTACGACAAGAAAGATGATGATTGCACAACATGTGCAGTGTGCTTGGGAGAGTTCGAGGAGGGTGATGAGTTGAGGAGGATGCCAGAGTGCATGCACTCTTTCCATGTCCCATGCATTGATATGTGGCTCCGTTCTCATTCAACTTGTCCCATTTGCCGTGCTCATGCCACACCCTCTTCTAACCATCACTTCAATCACACCACCATTGATATGGATTTCATGCAACGTATTCTTCTCCAAGGTGGCCATGCTCCCATGCTCATGATGTAG 507 0.4951 MADGDDGGGGGFLFNSNVSSVLAGMGSALIVLLLYRCMSMFLCIRHPLTTEQEQARSPPAGTQSSTLMNSVAHMIPSHKYDKKDDDCTTCAVCLGEFEEGDELRRMPECMHSFHVPCIDMWLRSHSTCPICRAHATPSSNHHFNHTTIDMDFMQRILLQGGHAPMLMM* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0026 168 Pfam Ring finger domain 89 132 IPR001841 -
Ahy20g0026 168 SUPERFAMILY RING/U-box 80 138 - -
Ahy20g0026 168 PANTHER CHROMATIN REGULATOR PHD FAMILY-RELATED 5 153 - -
Ahy20g0026 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 139 IPR013083 -
Ahy20g0026 168 ProSiteProfiles Zinc finger RING-type profile. 90 132 IPR001841 -
Ahy20g0026 168 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 5 153 IPR044675 -
Ahy20g0026 168 SMART ring_2 90 131 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0026 Ahy-Chr20 213660 214166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0026 20 140 C3H Transcription Factor Family AT5G17600 37.313 4.30e-23 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0026 - - ahf:112782505 329.717