Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0009 ATGTCATCGTCGGAGGCGGGCTACAAGACGCCCGAAGCAGAATACAATACCCCACCGGCGTTAATAGCATTCACGTTAGCCATCCTAGTGTTATGCTTCATGGCCTTCAGCGTTGTGTACTTGTGCAAGTACTGCCTTGTAAGCGTCCTCCACTCTTGGGCCTTCCACCAGAGTTTCTCTGGTTCATTGCTTCGTCCTTCATCAACAAATAGGTCTTCCTCAATAGGCCTTGATCCTTCCATGCTTCAAACGTTCCCAACCTTTGTGTATTCCTCCGTAAAGGACCTCCGCAGCCTAGAATGTGCCATTTGCTTGCTCGAATTCGAGGACGACAGCTTGATTCGCCTCTTGACTATTTGCTGCCATGTTTTCCACCAAGAATGCATTGACCTTTGGCTTTATTCCCACAAGACTTGCCCTGTTTGCCGCACAAACCTCGAGGAGCATAAATCAGGAGAAGGAGAAATCAGTGGTAGCAGTGGTGGTGCTGACATACGCATTGACATAATAACAGACATGGCCACCCAAGGTAGTGGGGGTCATCAGGGTACAGGAGGAGAGGATCATTCGTGTAGTGATGAACATTATCATAATAATAATGGGGTGCAGCAAGAACATAAGTTTGCAAGGTCACACTCAACGGGCCATTCCATAGTTTTTAGAGGAGAAGAAGAAGAAAATGATGATAAATATACCTTGAGGCTGCCGCAACACATTATAAGAGGGCGGCACCACTATTCTAAGAGTTGTACAAGTTTTCAAGAGATGCAGATGACGACTTCGACTAGGCCTTGTAGTAATTGTGGCTTTGTTGAATCTGTATCTAGCTGCTCCACCTCTCTCGCTCATATCCAAATTTCTTGA 864 0.463 MSSSEAGYKTPEAEYNTPPALIAFTLAILVLCFMAFSVVYLCKYCLVSVLHSWAFHQSFSGSLLRPSSTNRSSSIGLDPSMLQTFPTFVYSSVKDLRSLECAICLLEFEDDSLIRLLTICCHVFHQECIDLWLYSHKTCPVCRTNLEEHKSGEGEISGSSGGADIRIDIITDMATQGSGGHQGTGGEDHSCSDEHYHNNNGVQQEHKFARSHSTGHSIVFRGEEEENDDKYTLRLPQHIIRGRHHYSKSCTSFQEMQMTTSTRPCSNCGFVESVSSCSTSLAHIQIS* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0009 287 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Ahy20g0009 287 MobiDBLite consensus disorder prediction 177 196 - -
Ahy20g0009 287 SMART ring_2 101 142 IPR001841 -
Ahy20g0009 287 PANTHER RING-H2 FINGER PROTEIN ATL29 7 256 - -
Ahy20g0009 287 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 149 IPR013083 -
Ahy20g0009 287 CDD RING-H2_EL5_like 100 143 - -
Ahy20g0009 287 PANTHER RING FINGER DOMAIN-CONTAINING 7 256 - -
Ahy20g0009 287 Pfam Ring finger domain 100 143 IPR001841 -
Ahy20g0009 287 SUPERFAMILY RING/U-box 81 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0009 Ahy-Chr20 120089 120952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0009 19 249 Rapid Response to Elicitors AT2G35000 32.937 1.26e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0009 - - ahf:112732715 494.582