Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g3018 ATGCCTGTAAATCCATGGACCCTCTTCTTCTTCTCCTTCTTATGCATTTCCCTTTTCCTTCCATACCAATACTCCTTCGCCGTCAACCCACAAGGGGAAGCTCTTCTTTCTTGGAAGAGAACCTTAAACGGTTCCTTAGAGGTTCTCAGCAGTTGGGACCGAATTGAACACACTCCATGCACCTGGTTCGGTGTAAGCTGCAACATCAACAACCAAGTAGTTCAATTGGATCTCAGGTATGTGGATTTGTTTGGAAAACTCCCTACGAATTTCACTGCATTGACTTCATTGAACAAACTCATCTTAACCGGAACCAACCTCACGGGCTCTATTCCCAAGGATATTGCCAACCTTCTAGAACTCACCTACTTGGACCTCAGTGACAATGCATTAAGCGGTGAAATCCCAACAGAACTCTGTTACTTGCCGAAACTCCAAGAGCTTCATCTGAACTCCAATGACCTTGTTGGCTCCATTCCGGTGGCGATTGGGAACCTCACCAATCTCCAGAAGCTAACCATTTATGATAACCAACTCAACGGTGAGATTCCGGCCACCATCGGGAACTTGAAGAGCTTGCAAGTTATCAGAGCCGGTGGGAACAAGAATCTACAAGGTGCTTTACCCGAAGAAATTGGAAACTGTTCCAACTTAGTGAAGCTGGGTTTGGCTGAAACTAGCATCTCTGGTTCTCTTCCTAAAACATTGGGACTACTCAAGAGCCTTGAAACCATTGCCATCTACACTACGCTTCTCTCAGGCGAAATTCCACAAGAACTCGGCGACTGTACTCTCCTCAAGAATGTCTATCTCTATGAAAACTCGCTCACCGGATCCATTCCTAAGGAACTGGGGAAACTCAGCAGCCTTGAGATTCTTCTGCTATGGCAGAACAATCTGGTCGGCACCATTCCCCCGGAGATTGGTAACTGCCTCCAGTTAGCGGTTATCGACGTGTCAATGAACTCGATTACTGGAAGCATACCGGAGAGTTTTGGCAGATTAACGAAGCTAGAGGAGCTTCAGCTGAGCGTAAACCAGATTTCAGGGGAGATTCCTGCAGAGCTTGGTAACTGCCAGCAACTAACTCACGTGGAGATAGATAACAACCTCATAACGGGAACGATACCTTCAGAGTTGGGGAACCTCAAGAACTTGACGCTTCTCTTCCTTTGGCATAACAAACTCGAAGGGAACATACCATCCTCGCTCTCTAACTGCCACAACCTTGAGGCCGTTGATCTCTCGCAAAACATGCTGACGGGTCAGATACCTAAGGGGATATTCCAGCTCAGCAATCTGAACAAACTTCTGTTACTCTCTAACAACCTATCCGGAATCATTCCTTCAGAGATTGGTAACTGCTCCTCCCTCATACGCTTCAGAGCCAGTAACAACAAGATCACAGGTACCATTCCGCCTCAGATCGGCAACTTGAAGAATCTCAACTTCTTGGACCTTGCCAATAACCGTATTTCGGGTGTTATTCCGGACGAAATCTCCGGCAGCCGCAATCTTACTTTCTTGGACTTGCATTCTAATTTGATCGCCGGAAGCTTGCCGGAGAGTCTGAGCGAGCTTGTTTCGCTTCAGTTTCTAGATGTTTCTGAGAACGTCATCGGAGGGACGTTGAGTCCTGCGCTTGGTTCACTCGGTGCGTTGACGAAGCTGGTTTTAGGGAGGAATCGGATCTCCGGTTCGATTCCGAATCAACTTGGTTCTTGCTCAAAGCTTCAGTTGCTCGACCTTGGCAGCAACCAACTCTCCGGAAAAATCCCTGGAAGTCTTGGAAATATTCCATCTCTGGAAATAGCCATGAATCTAAGCCTCAACCAACTCTCCGGCGAGATTCCAAGGGAGTTCTCGAACTTGGAGAAGCTTGGTGTCTTGGACATTTCTCACAATGCCATCACTGGAAATCTCCAATATCTCGCTGGTTTGCAAAATCTCGTGGTGCTTAACGTCTCGCACAACAGATTCTCAGGTCACGTCCCAGACACTCCATTCTTCACGAAACTTCCGCTTAGCGTGCTCGAAGGGAACCCCGTGCTGTGCTTCGCCGGTAACCAGTGCTCCGGTAACGGCAACGATGCCGGGAAGTCGTCGCGTCGAGCAAGGGAGGCACGCGTGGCAATGGTGGTCCTATTATGCACGGCATGCGCTCTGCTCATGGCGGCGCTATACGTCGTAGTCTCTGCCAAACGAAGAGGGGACCGCGAAAACGACGCCGAAATGGACGGAAAGGATAGCGACGGCACGGACATGGCCCCACCCTGGGAAGTAACACTTTACCAGAAGCTCGACCTGTCGATTTCTGACGTGGCAAAATGCCTGTCCACCAGCAACGTCATCGGGCACGGTCGATCCGGTGTCGTTTACAAGGTGAACATGCCTGGAACGGGGCTGACCATCGCCGTGAAGAAGTTCAAGACGTCGGATAAATTATCGGCGTCGGCGTTCTCGTCGGAGATTGCGACTCTGGCAAGGATACGCCACCGTAACATTGTGCGATTACTTGGTTGGGGCGCAAACCGTAAAACAAAGTTACTGTTTTACGATTATTTACCTAACGGTAACCTGGACACGCTGTTGCATGAGGGATGCACAGGATTAATAGAGTGGGAGACGCGGCTCAAGATAGCACTGGGCGTCGCTGAGGGCGTAGCTTACTTGCACCACGATTGCGTCCCTGCTATCTTGCACCGCGACGTTAAAGCCCTCAACATCCTGTTAGGTGACAGGTACGAACCGTGTTTGGCTGATTTCGGATTCGCACGCTTCTTGGAAGAAGATCACCCTTCGTTTTCCGTTAATCCACAGTTCGCAGGTTCTTACGGGTACATTGCTCCTGAGTATGGTTGCATGCTAAAGATAACAGAGAAGAGCGATGTTTACAGCTTTGGGGTGGTCCTGCTAGAGATTCTAACAGGGAAAAGGCCAGTAGATCCATCATTCCGAGAAGGGGAACACGTAATCCAGTGGGTGAGGGAGCACCTTAAGAGCAAGAAAGACCCAATAGAGGTTCTTGATCCCAAGCTACAAGGGCACTCAGACACACAGATTCAGGAGATGCTGCAGGCGCTTGGGATATCTCTACTGTGCACCAGCAACCGGGGGGAGGATCGACCGACAATGAAGGACGTGGCAGCATTATTGAGAGAAATCAGACACGAAGAGGGCCCACCGGCAGGGTGTGATGAGGCCCACAAGCCCATCAAAAGAAACACGGAGGCCTCGTCGTATTCTTCGTCGTCCTTGTCCTCCACTGTGACCCCGGCTCAGTTATTGCTCCTTCAATCAGGCTCTCATTCCTCGTCCTCCCTTGCATATTCCTCTTCCTCCGTAGCCGCAGGGTACCACTACCCACCAAGGAATCATCAATCATGA 3387 0.4987 MPVNPWTLFFFSFLCISLFLPYQYSFAVNPQGEALLSWKRTLNGSLEVLSSWDRIEHTPCTWFGVSCNINNQVVQLDLRYVDLFGKLPTNFTALTSLNKLILTGTNLTGSIPKDIANLLELTYLDLSDNALSGEIPTELCYLPKLQELHLNSNDLVGSIPVAIGNLTNLQKLTIYDNQLNGEIPATIGNLKSLQVIRAGGNKNLQGALPEEIGNCSNLVKLGLAETSISGSLPKTLGLLKSLETIAIYTTLLSGEIPQELGDCTLLKNVYLYENSLTGSIPKELGKLSSLEILLLWQNNLVGTIPPEIGNCLQLAVIDVSMNSITGSIPESFGRLTKLEELQLSVNQISGEIPAELGNCQQLTHVEIDNNLITGTIPSELGNLKNLTLLFLWHNKLEGNIPSSLSNCHNLEAVDLSQNMLTGQIPKGIFQLSNLNKLLLLSNNLSGIIPSEIGNCSSLIRFRASNNKITGTIPPQIGNLKNLNFLDLANNRISGVIPDEISGSRNLTFLDLHSNLIAGSLPESLSELVSLQFLDVSENVIGGTLSPALGSLGALTKLVLGRNRISGSIPNQLGSCSKLQLLDLGSNQLSGKIPGSLGNIPSLEIAMNLSLNQLSGEIPREFSNLEKLGVLDISHNAITGNLQYLAGLQNLVVLNVSHNRFSGHVPDTPFFTKLPLSVLEGNPVLCFAGNQCSGNGNDAGKSSRRAREARVAMVVLLCTACALLMAALYVVVSAKRRGDRENDAEMDGKDSDGTDMAPPWEVTLYQKLDLSISDVAKCLSTSNVIGHGRSGVVYKVNMPGTGLTIAVKKFKTSDKLSASAFSSEIATLARIRHRNIVRLLGWGANRKTKLLFYDYLPNGNLDTLLHEGCTGLIEWETRLKIALGVAEGVAYLHHDCVPAILHRDVKALNILLGDRYEPCLADFGFARFLEEDHPSFSVNPQFAGSYGYIAPEYGCMLKITEKSDVYSFGVVLLEILTGKRPVDPSFREGEHVIQWVREHLKSKKDPIEVLDPKLQGHSDTQIQEMLQALGISLLCTSNRGEDRPTMKDVAALLREIRHEEGPPAGCDEAHKPIKRNTEASSYSSSSLSSTVTPAQLLLLQSGSHSSSSLAYSSSSVAAGYHYPPRNHQS* 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g3018 1128 SMART LRR_typ_2 118 142 IPR003591 -
Ahy1g3018 1128 SMART LRR_typ_2 504 527 IPR003591 -
Ahy1g3018 1128 SMART LRR_typ_2 647 680 IPR003591 -
Ahy1g3018 1128 SMART LRR_typ_2 408 431 IPR003591 -
Ahy1g3018 1128 SMART LRR_typ_2 287 311 IPR003591 -
Ahy1g3018 1128 SMART LRR_typ_2 479 503 IPR003591 -
Ahy1g3018 1128 SMART LRR_typ_2 166 190 IPR003591 -
Ahy1g3018 1128 SMART LRR_typ_2 383 407 IPR003591 -
Ahy1g3018 1128 SMART LRR_typ_2 335 359 IPR003591 -
Ahy1g3018 1128 SMART LRR_typ_2 551 575 IPR003591 -
Ahy1g3018 1128 MobiDBLite consensus disorder prediction 1059 1074 - -
Ahy1g3018 1128 Pfam Leucine Rich Repeat 577 598 IPR001611 GO:0005515
Ahy1g3018 1128 Gene3D Ribonuclease Inhibitor 363 426 IPR032675 -
Ahy1g3018 1128 SMART LRR_sd22_2 479 500 - -
Ahy1g3018 1128 SMART LRR_sd22_2 335 350 - -
Ahy1g3018 1128 SMART LRR_sd22_2 624 649 - -
Ahy1g3018 1128 SMART LRR_sd22_2 166 192 - -
Ahy1g3018 1128 SMART LRR_sd22_2 575 601 - -
Ahy1g3018 1128 SMART LRR_sd22_2 503 526 - -
Ahy1g3018 1128 SMART LRR_sd22_2 118 144 - -
Ahy1g3018 1128 SMART LRR_sd22_2 383 409 - -
Ahy1g3018 1128 SUPERFAMILY RNI-like 269 637 - -
Ahy1g3018 1128 SUPERFAMILY L domain-like 28 302 - -
Ahy1g3018 1128 ProSitePatterns Serine/Threonine protein kinases active-site signature. 899 911 IPR008271 GO:0004672|GO:0006468
Ahy1g3018 1128 SMART serkin_6 778 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g3018 1128 Pfam Leucine rich repeat 96 155 IPR001611 GO:0005515
Ahy1g3018 1128 Pfam Leucine rich repeat 289 348 IPR001611 GO:0005515
Ahy1g3018 1128 Pfam Leucine rich repeat 481 539 IPR001611 GO:0005515
Ahy1g3018 1128 Gene3D Ribonuclease Inhibitor 178 274 IPR032675 -
Ahy1g3018 1128 Gene3D Ribonuclease Inhibitor 27 177 IPR032675 -
Ahy1g3018 1128 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Ahy1g3018 1128 SUPERFAMILY Protein kinase-like (PK-like) 766 1052 IPR011009 -
Ahy1g3018 1128 MobiDBLite consensus disorder prediction 1104 1128 - -
Ahy1g3018 1128 Gene3D Transferase(Phosphotransferase) domain 1 855 1070 - -
Ahy1g3018 1128 PANTHER OS01G0170300 PROTEIN 3 1073 - -
Ahy1g3018 1128 Gene3D Ribonuclease Inhibitor 275 362 IPR032675 -
Ahy1g3018 1128 Gene3D Phosphorylase Kinase; domain 1 759 854 - -
Ahy1g3018 1128 Gene3D Ribonuclease Inhibitor 520 605 IPR032675 -
Ahy1g3018 1128 Gene3D Ribonuclease Inhibitor 606 692 IPR032675 -
Ahy1g3018 1128 ProSitePatterns Protein kinases ATP-binding region signature. 784 808 IPR017441 GO:0005524
Ahy1g3018 1128 MobiDBLite consensus disorder prediction 1059 1087 - -
Ahy1g3018 1128 Pfam Protein kinase domain 781 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g3018 1128 Gene3D Ribonuclease Inhibitor 427 519 IPR032675 -
Ahy1g3018 1128 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 1073 - -
Ahy1g3018 1128 ProSiteProfiles Protein kinase domain profile. 778 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g3018 Ahy-Chr1 112395554 112400238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g3018 26 1115 Receptor kinase-like Gene Family AT5G56040 53.139 0.0 1108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy1g3018 Pkinase 4.10E-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g3018 - - adu:107493731 2125.9