Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g3009 ATGGGACACAAGAAGCGAAATTCGGCTCCGCGGTCCAAACATTCGCCGGCGACTTCTCCGGCGGCGCAATTCGCCGTCGTCGGCGACGGTACCGCATCGCCGGAGAAACAAGACTCAGGCAATGTTCCCGATCACAACAGCAACACCAATAACGGCGTTCAGAACCCTAACGGGATCGAGTTTCCTCCTCCGCCACCGCCGCCGCCTCCTCCGCCTCAATCCGATGGTCCTTCCTCCGATTACACCGCGATCAAGCTCGAGTGTGAGCGTGCCCTAACGGCGTTCCGGCGCGGGAACCACAACAGAGCACTGAAGCTCATGAAGGAGCTATGCGGGAAACAAGAGAACGCTGCTCACTCCGCATTTGCGCACCGCGTCCAGGGATTCGTCGCCTTTAAGGTCGCTGGAATCTTGAACGACCCTACCGCGAAGCAACGGCACGTGAAGAACGCCGTCGATTCGGCTCGCAAGGCCGTCGAGCTGTGCCCTAATTCGGTCGAGTACGCGCACTTCTACGCCAATTTGATGCTCGAGGTCGCGAACGACGGGAAGGATTATGAGGAGGTAGTGCAGGAGTGCGAGAGGGCGCTGGCGATAGAGAACCCTAGCGATCCAGGGAAGGAGAGCTTCCAGGATGAGAGTGATCAGAAGTTGTCGACTCCCGAGGCACGTGTTTCGCATGTGCAAAACGAGCTGCGGCAGCTGATTCAGAAGTCGAACATCGCTTCGCTGTCGAGCTGGGTGAAGAATCTGAGCAACGGCGAGGAGAGATTTCGGCTGATTCCGATTAGGAGGCCGACGGAGGACCCTATGGAGCTGAGACTGGTTCAGACTCGAAGGCCTAACGAGATCAAGAAAGTGACGAAGACGCCGGAAGAGAGGAGGAAGGAGATTGAAGTGAGAGTCGCCGCTGCGAGGCTGTTGCAGCAGAAGTCTGAGTCGCCCCAATCTCCGAACGAAGTAGATAAGGATGAGAGGGGGGTGGATTCATCTTCAGCGACTGGTCAGAGTAGGAGGAGGCATGTGAATTCGAAGAAGAATGGGTCTACTGCTGAGAGGAGGAAATGGGTGCAATCTTACTGGAGTTCGATGAGTGTGGAAATGAAGAAGGACTTGCTTAGGGTTAGGGTTTCTGATCTTAGGTCACACTTTGGGTCTTCGAAGGATACTTTGCCTATCGATCTTTTGGCGGAGGCTGTGTCGTATGCTGAGGCCAATAAGACATGGAAATTCTGGGTTTGCTGCCATTGTGATGAGAAATTTAACGATGACGAGTCTCACAGCCAACATCTTGCGCAGGCGCACATGGGTATGCTCTCGCCGAATTTGCAGGGGCATCTGCCCCATAATGTTGACAGTGAGTGGATTGATATGATTCATAATTGTTCTTGGAAGCCTCTGGATGTTTCTGCTGCAGTTAAAATGCTTGAGAGTAGAATGAAATTCAAAGGTTCAACATTAGTTGAGGATTCGTACTTCGATCATCATACACAGGACTACTATGACTGTATTAACGATGCAACTGATCCTTACCATGAGAAAGAAGGTTTGGGATACAGTCTTCATAACTGTACAACAGAAAGCAATAACTATTGTAAAGCTGTTGCAAGTAATGTGAGAGAAGGCGTTGAAAACCAATTATCTATGTCGCATCCTTTCGCTGATAGTTGGCCAGTATCTGATGATTCTGAGCGCGCAAAACTTCTGGAGAAAATTCATGCAGTATTTGAGATGCTTATTAAGCATAAATATCTTGCTGCTAGTCACCTTAGCAAGGTTATACAATTTACTATGGGTGAGATTCAGGGTCTTGCTGCTGGTTCTCAATTTCTAAACCATGGTGTCGACCAAACGCCAATGTGCATATGCTTTCTGGGGGCATCACAGCTTAAGAAAATTCTCCAATTTCTTCAAGAGCTATCTCATGCATGCGGATTGGGTAGATATGGTGATAAAGGTAATGGTCTCATGAATGAGTTTCATGATATCAATCAAGGTCCTGAGATCAAAGAGAATATTGTTCTCAATAGAGATGCATCATGCCTCCTTCTGGATGAGTGTTTACTGGTTACACAAGTCACTTTTGATGCTGCTCAGGGGACTGTATTGGATAATATGACTGCCCAAAGTTCTCATGATGGTATTTCAAGCGATAATGATGATTTTCTATCCTGGATATATTCAGGTTCAGCTATCGGGGATCAATTGACATCATGGATGCGAACCAAAGAAGATAATAAACACCAAGGTACAGAAATTATCAAGATGCTTGATAAGGAGTTTTATCAACTACAGACCCTATGTGAGAAGAAGTCTGACCGAATGAGTTATGAGGAAGCACTGCAGACAGTAGAGGATCTTTGTCTTGAAGAGGGAAAGAAGAGGGAAATTGTTGGTGACTTTGTCCAGCAAAGCTATGAGTCTGTCTTAAGAAAACGAAGAGAAGAGCTCATTGAAAGTGAGAATGATGTGATGAATGTCGGCAATAGGTTTGAGTTGGATGCCATATCAAATGTTTTGCAAGAAGCAGAATCAATGAATGTTAATCAATTTGGATATGAAGAAACTTATGCTGGTGTGACTGCTCAGTTATGTGACTTGGAATCTGGTGAAGAAGAAGAATGGAGAATGAAAGACTACTTGCATCAAATGGATGGTTGTATAGAAATTGCTATTCAGAAACTGAAAGAGCACTTGTCTATAGAGCTTAGCAAAATTGATGCTCGAATCATTAGAAATATTGCTGAGATGCAACAATTGGAACTCAAGCTTGGGCCTCTTTCCGCTTATGATTATCGGGCTATATTATTGCCTCTAGTGAAGTCATACCTAAGGGCACGTTTAGAAGAATTTGCCGAGAAGGATGCAGTAGAGAAGTCTGATGCTGCAAGGGAAGCATTCTTGGCTGAACTTGCACGTGATGCTAAGAAGGCTAAAGGGGGAAGTGAGAACACAAGAAATGTGGATAAGACCAAAGATAAGAAGAAGACTAAAGATCACAGAAAAACAAAAGATCTGAAGGCTTCAAGTGGTCATGAGGAGCTATTGCTGCAAGCTAGCAGTCCTGATTCCAATACTGTTGCACCTGATAGTTACTTTCAAGATCCTGAGCTTGTTTCCATGAATGATAATTACTTGGAACAACAGGAAGAGGAATATAGACGGAAAATAGAGCTAGAAGAGGAGGAAAAAAAGCTTGAGGAAACTTTAGAATTTCAGCGTAGGATAGAAAATGAAGCCAAACAAAAACACCTTGCCGAATTACAAAAGAAATCGTCCGGGATATGTTTAGAGGAAGTTGCGGACAAAATTCAGGATGCTCAGTTGAAGACAGTTGCTGATGGGCCAGATGTGCATGATCATGTAAAACTGCCTATACAGGAGCAGTCAGCTGATGAGAATTGCTGTCCTAGTGAAGTGGATAGTGTGATAGTCACCACTAAAAATGGTTCTTTGGTGCCAAATAAATATTCAGTTGATTCAGCTGATCAAAAGATATTGCATCAGCCAACTGTTAAACAAGCAGGTATACCTAATGGAGTTGTTCCAGAGAATGGTCATCAGTTGCCTGATCGTCGTGCAGGGAAAAAGCATAAACGGCATAGGAATTCTTCCAAAATGGTTGATGGAAAATTGGAATCTGTCTCATTGGAAAAGAATATTGAGGATGCACATACTGACAGACATTCAAGAGAGCATGTTAAATTCCATAATGATCAAGATGCAAACAATGGGTGGGAAAGCAATGTATCAAAGGCGAAGAAAGATCTGCAAATGGAAGATGAGGAGGAGGAAAGATTCCAAGCTGATCTTAAAAAGGCTGTACGACAAAGCCTGGACACATATCAAGCACGTGGAAAACTGCCTTTGGATTCTAGTTTAAGAATGTCTCAGAGATCTGCTTCACAAGTAGATTCATTGGGTTTTCCAACAGAGAAAGACTCAACTGAGGATGCAAATGGAACTACATTGCTTGGTACTGGGCTAAAGAATGAAGTTGGTGAATATAACTGTTTTCTCAATGTTATTATACAGTCTTTATGGCATTTAAGATGCTTTCGGGAGGAATTTCTTGGCAGATCAAGATCAGAGCATGATCATGTTGGCAATCCTTGTGTCGTCTGTGCATTGTATGAGATCTTCACTGCTTTGGACCTTGCATCAAAGGACTCAAGGAGAGAAGCAGTAGCACCTACTTCCCTGCGAATAGCTCTAAGCAACCTATATCCAGATAGTAACTTCTTCCAGGAGGCTCAGATGAACGATGCTTCTGAGGTACTTGCAGTGATATTTGACTGCCTTCATCGTGCATTTACCCGTGGTTCAAGTGTTTCTGACACTGAGTCGGTGGAAAGTAATTGCATGGGATCTTGGGATTGTGCAAATAATACTTGTATAGCACATTCACTTTTCGGAATGGACATTTTTGAGCAAATGAACTGCTATCACTGTGGTCTCGAGTCCAGACATTTGAAGTATACATCCTTCTTTCACAATATAAATGCCAACGCATTACGAACAATGAAGGTTATGTGTTCTGAAAGTTCCTTTGATGAGCTATTGAACCTTGTGGAGATGAACCATCAATTGGCTTGTGATCCAGAAGTTGGTGGTTGTGGCAAGCTTAACTACATCCATCACTTTCTTTCAACTCCACCTCATGTTTTTATGACAGTTCTTGGTTGGCAAAATACATGCGAGAGTGCTGATGATATAACAGCCACTGTGGCAGCCCTGAGCACTGCACTAGACATCAGTGTCCTATATCGAGGCTTAGATCCTAAAAGAACTCATAGCTTGGTATCAGTGGTTTGCTACTATGGCCAACATTATCATTGCTTTGCTTACAGTCATGACCATGATCAATGGATTATGTATGATGACAAGACTGTCAAGATAATTGGTGGATGGGCAGATGTTCTTACAATGTGTGAAAAAGGGCATCTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAACTAG 4983 0.4419 MGHKKRNSAPRSKHSPATSPAAQFAVVGDGTASPEKQDSGNVPDHNSNTNNGVQNPNGIEFPPPPPPPPPPPQSDGPSSDYTAIKLECERALTAFRRGNHNRALKLMKELCGKQENAAHSAFAHRVQGFVAFKVAGILNDPTAKQRHVKNAVDSARKAVELCPNSVEYAHFYANLMLEVANDGKDYEEVVQECERALAIENPSDPGKESFQDESDQKLSTPEARVSHVQNELRQLIQKSNIASLSSWVKNLSNGEERFRLIPIRRPTEDPMELRLVQTRRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSESPQSPNEVDKDERGVDSSSATGQSRRRHVNSKKNGSTAERRKWVQSYWSSMSVEMKKDLLRVRVSDLRSHFGSSKDTLPIDLLAEAVSYAEANKTWKFWVCCHCDEKFNDDESHSQHLAQAHMGMLSPNLQGHLPHNVDSEWIDMIHNCSWKPLDVSAAVKMLESRMKFKGSTLVEDSYFDHHTQDYYDCINDATDPYHEKEGLGYSLHNCTTESNNYCKAVASNVREGVENQLSMSHPFADSWPVSDDSERAKLLEKIHAVFEMLIKHKYLAASHLSKVIQFTMGEIQGLAAGSQFLNHGVDQTPMCICFLGASQLKKILQFLQELSHACGLGRYGDKGNGLMNEFHDINQGPEIKENIVLNRDASCLLLDECLLVTQVTFDAAQGTVLDNMTAQSSHDGISSDNDDFLSWIYSGSAIGDQLTSWMRTKEDNKHQGTEIIKMLDKEFYQLQTLCEKKSDRMSYEEALQTVEDLCLEEGKKREIVGDFVQQSYESVLRKRREELIESENDVMNVGNRFELDAISNVLQEAESMNVNQFGYEETYAGVTAQLCDLESGEEEEWRMKDYLHQMDGCIEIAIQKLKEHLSIELSKIDARIIRNIAEMQQLELKLGPLSAYDYRAILLPLVKSYLRARLEEFAEKDAVEKSDAAREAFLAELARDAKKAKGGSENTRNVDKTKDKKKTKDHRKTKDLKASSGHEELLLQASSPDSNTVAPDSYFQDPELVSMNDNYLEQQEEEYRRKIELEEEEKKLEETLEFQRRIENEAKQKHLAELQKKSSGICLEEVADKIQDAQLKTVADGPDVHDHVKLPIQEQSADENCCPSEVDSVIVTTKNGSLVPNKYSVDSADQKILHQPTVKQAGIPNGVVPENGHQLPDRRAGKKHKRHRNSSKMVDGKLESVSLEKNIEDAHTDRHSREHVKFHNDQDANNGWESNVSKAKKDLQMEDEEEERFQADLKKAVRQSLDTYQARGKLPLDSSLRMSQRSASQVDSLGFPTEKDSTEDANGTTLLGTGLKNEVGEYNCFLNVIIQSLWHLRCFREEFLGRSRSEHDHVGNPCVVCALYEIFTALDLASKDSRREAVAPTSLRIALSNLYPDSNFFQEAQMNDASEVLAVIFDCLHRAFTRGSSVSDTESVESNCMGSWDCANNTCIAHSLFGMDIFEQMNCYHCGLESRHLKYTSFFHNINANALRTMKVMCSESSFDELLNLVEMNHQLACDPEVGGCGKLNYIHHFLSTPPHVFMTVLGWQNTCESADDITATVAALSTALDISVLYRGLDPKRTHSLVSVVCYYGQHYHCFAYSHDHDQWIMYDDKTVKIIGGWADVLTMCEKGHLQPQVLFFEAVN* 1661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g3009 1660 SUPERFAMILY Cysteine proteinases 1327 1657 IPR038765 -
Ahy1g3009 1660 MobiDBLite consensus disorder prediction 1014 1028 - -
Ahy1g3009 1660 MobiDBLite consensus disorder prediction 1290 1320 - -
Ahy1g3009 1660 Gene3D Tetratricopeptide repeat domain 80 212 IPR011990 GO:0005515
Ahy1g3009 1660 Pfam Ubiquitin carboxyl-terminal hydrolase 1328 1635 IPR001394 GO:0004843|GO:0016579
Ahy1g3009 1660 Pfam Protein of unknown function (DUF629) 357 889 IPR006865 -
Ahy1g3009 1660 Coils Coil 1042 1083 - -
Ahy1g3009 1660 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1660 - -
Ahy1g3009 1660 MobiDBLite consensus disorder prediction 307 351 - -
Ahy1g3009 1660 MobiDBLite consensus disorder prediction 976 994 - -
Ahy1g3009 1660 MobiDBLite consensus disorder prediction 206 220 - -
Ahy1g3009 1660 MobiDBLite consensus disorder prediction 1293 1320 - -
Ahy1g3009 1660 MobiDBLite consensus disorder prediction 976 1028 - -
Ahy1g3009 1660 PANTHER INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE 1 1660 - -
Ahy1g3009 1660 MobiDBLite consensus disorder prediction 1 80 - -
Ahy1g3009 1660 ProSitePatterns Zinc finger C2H2 type domain signature. 414 435 IPR013087 -
Ahy1g3009 1660 MobiDBLite consensus disorder prediction 34 57 - -
Ahy1g3009 1660 MobiDBLite consensus disorder prediction 58 76 - -
Ahy1g3009 1660 Pfam Protein of unknown function (DUF627) 90 201 IPR006866 -
Ahy1g3009 1660 Coils Coil 1257 1277 - -
Ahy1g3009 1660 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1327 1659 IPR028889 -
Ahy1g3009 1660 SUPERFAMILY Formin homology 2 domain (FH2 domain) 62 72 - -
Ahy1g3009 1660 MobiDBLite consensus disorder prediction 1175 1205 - -
Ahy1g3009 1660 CDD Peptidase_C19 1418 1657 - -
Ahy1g3009 1660 MobiDBLite consensus disorder prediction 200 221 - -
Ahy1g3009 1660 Gene3D Cysteine proteinases 1308 1658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g3009 Ahy-Chr1 112181289 112191196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g3009 80 1657 C2H2 Transcription Factor Family AT3G47890 56.614 0.0 1698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g3009 - - adu:107493676 3261.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1833 11 118686512 118696403 Ahy1g3009 1 112181289 112191196 hybridization