Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g3001 ATGCAAATGAAAATGGGTTATGGAGTGTGGGGTTTCTTCATTTTGACCACATTTTTATTCTGTTCTTCCTCTCTTGCTCTCACCCAAGATGGTTTGGCCTTGTTGGAAATGAAAAGCACATTGAATGACACAAAAAATGTTCTCAGCAACTGGCAAGAGTTTGATGAATCTCCTTGTTCATGGACTGGTATCTCATGTTACCCTGATGCTGAACAAAGAGTTCGCTTCATAAATCTTCCATACATGCAACTTGGAGGAATCATATCTCCCAGCATTGGCAAACTCACTAGACTACAGAGATTGGCACTTCATGAGAACAGCTTGCATGGGATTATTCCTTATGAAATCACTAATTGTACTGAGCTAAGAGCGCTGTACTTAAGGGGTAACTATTTCCAAGGTGGAATACCAGCAGCTATTGGAAATCTATCTTTTCTAAATATACTTGATTTATCAAGCAACACATTGAAAGGTGCTATACCTTCCTCTATTGGCCGTCTCTCGCATTTGCAAGTTCTGAATTTGTCTACCAACTTCTTTTCTGGAGAAATCCCTGACATTGGAGTTCTAAGCACCTTTGGGAAGAACTCGTTTATTGGCAATCTAGATCTTTGTGGGCGACAGGTCGAAAAACCATGCCGAACATCACTTGGCTTCCCTGTGGTGCTACCCCATGCTGAAAGCGAAGAAGCTGCAGTCCCTCCCAAAAAATCTTCACATTACATTAAGTGGTTGGTAATTGGGGCAATGTCAACAATGGGGATTGCACTTGTGATAATCCTATCATTACTGTGGGTCCGGTTGCTATCGAAGAAGGAAAGAGCTGCTAGGAGATACACAGAAATGAAGAAACAAGTTGATTCAGAATCAAGAGCAAAACTTATTACATTCCATGGTGATCTTCCATACGCATCATCCGAGATCATAGAGAAGCTGGAGTCTCTTGATGCAGAGGATGTAGTAGGATCAGGAGGATTCGGGACTGTTTACCGGATGGTGATGAATGATTGTGGCACATTTGCTGTCAAGCGGATTGACAGAACTCGTGAAGGGTGTGATCAAGTGTTTGAGAGGGAACTTGAGATCTTGGGGAGCATCAAGCATATAAATCTGGTAAACCTGCGCGGTTACTGCAGGCTCCCTTCTTCAAGGCTCCTCATATACGATTATTTGGCCATGGGAAGCTTAGATGATCTCTTGCATGAAAATACTCAACAACCACTGAATTGGAACGATCGCTTAAATATAGCCCTTGGTTCTGCCCGGGGTTTGGCGTACTTGCACCATGAGTGCTGTCCCAAAGTTGTACACCGCGACATCAAATCTAGCAACATTCTCCTTGATGAAAATTTGGAGCCTCGTATTTCTGATTTTGGTCTCGCAAGGCTTTTGGTCGATGAGGAGGCTCATGTCACTACAGTGGTTGCTGGCACATTTGGCTATTTGGCACCAGAGTACCTTCAAAGTGGTAGAGCCACTGAAAAGTCAGATGTGTATAGCTTTGGAGTTCTATTGCTAGAACTTATAACTGGAAAGAGGCCTACTGATCCTTCCTTCGCAAAGCGAGGTTTAAATGTTGTTGGTTGGATGAACACATTGCTGAGAGAAAACAGATTGGATGATGTGGTAGACAAAAGATGCACCAATGTGGATGCAGGGACTCTTGAGGGGATTCTTGATATAGCAGCAAGATGCACGGATGGAAATGCGGAAGAACGTCCATCGATGAATGAGGTGTTACAGTTGCTTGAGCAAGAAGTTATGTCTCCTTGTCCTAGCGAATTCTACGAGTCTCAGTCAGATCGCTGA 1809 0.4339 MQMKMGYGVWGFFILTTFLFCSSSLALTQDGLALLEMKSTLNDTKNVLSNWQEFDESPCSWTGISCYPDAEQRVRFINLPYMQLGGIISPSIGKLTRLQRLALHENSLHGIIPYEITNCTELRALYLRGNYFQGGIPAAIGNLSFLNILDLSSNTLKGAIPSSIGRLSHLQVLNLSTNFFSGEIPDIGVLSTFGKNSFIGNLDLCGRQVEKPCRTSLGFPVVLPHAESEEAAVPPKKSSHYIKWLVIGAMSTMGIALVIILSLLWVRLLSKKERAARRYTEMKKQVDSESRAKLITFHGDLPYASSEIIEKLESLDAEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRTREGCDQVFERELEILGSIKHINLVNLRGYCRLPSSRLLIYDYLAMGSLDDLLHENTQQPLNWNDRLNIALGSARGLAYLHHECCPKVVHRDIKSSNILLDENLEPRISDFGLARLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELITGKRPTDPSFAKRGLNVVGWMNTLLRENRLDDVVDKRCTNVDAGTLEGILDIAARCTDGNAEERPSMNEVLQLLEQEVMSPCPSEFYESQSDR* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g3001 602 SUPERFAMILY L domain-like 27 212 - -
Ahy1g3001 602 Gene3D Phosphorylase Kinase; domain 1 275 390 - -
Ahy1g3001 602 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Ahy1g3001 602 Pfam Protein kinase domain 318 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g3001 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Ahy1g3001 602 Gene3D Ribonuclease Inhibitor 27 215 IPR032675 -
Ahy1g3001 602 PANTHER RECEPTOR-LIKE PROTEIN 55 5 601 - -
Ahy1g3001 602 SMART serkin_6 315 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g3001 602 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Ahy1g3001 602 PANTHER LRR RECEPTOR-LIKE KINASE 5 601 - -
Ahy1g3001 602 ProSiteProfiles Protein kinase domain profile. 315 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g3001 602 SUPERFAMILY Protein kinase-like (PK-like) 301 584 IPR011009 -
Ahy1g3001 602 Gene3D Transferase(Phosphotransferase) domain 1 391 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g3001 Ahy-Chr1 111827279 111831397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g3001 12 592 Receptor kinase-like Gene Family AT2G35620 50.171 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Ahy1g3001 Pkinase 1.60E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g3001 - - gmx:100797653 1028.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1847 11 120395881 120400205 Ahy1g3001 1 111827279 111831397 hybridization