Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2989 ATGTTCAAGATCGTTGCCAGCAGAGCGAGGGCTTCAACTCCACATGCCCGCAACGCTCTACTTTCTTACAATGTCTCTCGGTCTGGTCATGCTCTATCATCTGCCACAGTAGAAGCCGAAGAGATATCAGGTTCTAGACCTGCTGAAGTTTTGAACTTGGTTCAGGGTAAATGGGTCGGAGCTTCAAAGTGGAACACAATTGTGGATCCGCTAAATGGAGACCCCTTTATTAAAGTTGGCGAAGTTGATGAAACAGGCCTTCAGCCCTTTGTGGAAAGTTTGGCCAGCTGCCCCAAGCATGGTCTGCACAATCCGTTTAAGGCTCCTGAGAGATATCTTATGTTTGGAGATATATCTGCTAAGGCAGCTCACATGCTATCACTCCCTAAGGTTTCAGATTTCTTTGCAAGGCTAATACAGAGAGTTTCTCCCAAGAGTTATCATCAGGCCTGTGCAGAAGTTTATGTGACACAAAAGTTTCTAGAGAATTTCTGCGGTGATCAGGTTCGTTTCCTGGCAAGGTCTTTTGGGGTGCCTGGAAATCATCTTGGGCAGCAAAGTCACGGTTTCCGTTGGCCATATGGTCCGGTGGCTATTATTACTCCTTTCAATTTTCCATTAGAGATTCCAGTCCTTCAACTGATGGGTGCACTTTACATGGGCAACAAGCCAGTTCTTAAAGTTGATAGCAAGGTAAGCATTGTCATGGAGCAAATGTTGCGTCTGCTTCACACATGTGGTTTACCTGTAGAAGACGTAGACTTCATAAATTGTGACGGGAAGACAATGAACAAGCTGTTGCAGGAGGCAAATCCAAGAATGACCCTTTTCACTGGTAGTTCAAGAGTGGCAGAGAAATTGGCTGTTGATCTGAAGGGCCGGATTAAATTGGAAGATGCTGGATTTGATTGGAAAATACTGGGCCCTGATGTTGACCAGGAAGATTATGTTGCATGGGTCTGTGACCAGGATGCTTATGCATGCAGTGGTCAGAAGTGCTCAGCACAATCATTATTATTTATGCATGAGAACTGGGCTTCTACTTCCTTGGTATCCAAATTGAAAGGTCTTGCTGAGAGAAGAAAGCTAGAGGACTTGACAATTGGTCCAGTTCTCACTTTTACAACTGAATCAATGATGGATCACATGAAACAATTACTTGAGATACCAGGTTCAAAGCTGCTCTTTGGGGGCAAGCCTTTAGAGGGTCATTCTATTCCACCTATTTACGGTGCTATTAAGCCCACTGCTATTTATGTTCCCCTTGAGGAAATTGTGAAGGACAAGAATTATGAGCTTGTGACAAAAGAAATTTTTGGACCTTTCCAGATAATTACTGACTACAAAAGCAGTCAACTACCAACTGTGTTGGATACATTGGAAAAAATGCATGCACATTTAACTGCTGCTGTAGTTTCAAATGATCCTCTCTTTTTACAGGAAGTCATTGGTAGATCAGTGAATGGTACAACTTATGCTGGTCTAAGAGCAAGGACTACTGGAGCTCCACAAAACCATTGGTTTGGACCTTCTGGAGATCCTAGGGGTGCTGGAATCGGAACACCAGAAGCTATAAAACTAGTATGGTCTTGCCACAGAGAAGTTATATATGATTATGGTCCAGTACCAAACCGTTGGGAAATTCCTCCATCAACATGA 1659 0.4352 MFKIVASRARASTPHARNALLSYNVSRSGHALSSATVEAEEISGSRPAEVLNLVQGKWVGASKWNTIVDPLNGDPFIKVGEVDETGLQPFVESLASCPKHGLHNPFKAPERYLMFGDISAKAAHMLSLPKVSDFFARLIQRVSPKSYHQACAEVYVTQKFLENFCGDQVRFLARSFGVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPVEDVDFINCDGKTMNKLLQEANPRMTLFTGSSRVAEKLAVDLKGRIKLEDAGFDWKILGPDVDQEDYVAWVCDQDAYACSGQKCSAQSLLFMHENWASTSLVSKLKGLAERRKLEDLTIGPVLTFTTESMMDHMKQLLEIPGSKLLFGGKPLEGHSIPPIYGAIKPTAIYVPLEEIVKDKNYELVTKEIFGPFQIITDYKSSQLPTVLDTLEKMHAHLTAAVVSNDPLFLQEVIGRSVNGTTYAGLRARTTGAPQNHWFGPSGDPRGAGIGTPEAIKLVWSCHREVIYDYGPVPNRWEIPPST* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2989 552 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 25 551 - -
Ahy1g2989 552 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 326 337 IPR016160 GO:0016491
Ahy1g2989 552 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 303 493 IPR016163 GO:0016620
Ahy1g2989 552 Pfam Aldehyde dehydrogenase family 121 494 IPR015590 GO:0016491
Ahy1g2989 552 SUPERFAMILY ALDH-like 52 518 IPR016161 GO:0016491
Ahy1g2989 552 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 44 302 IPR016162 GO:0016491
Ahy1g2989 552 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 25 551 IPR044638 GO:0004029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2989 Ahy-Chr1 111707918 111714684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2989 1 552 Aldehyde Dehydrogenase Gene Family AT5G62530 78.957 0.0 946
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2989 K00294 - gmx:100806579 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1866 11 121442283 121449041 Ahy1g2989 1 111707918 111714684 hybridization