Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2985 ATGGGGAAGTCACCAGGAAAATGGATCAAAACTGTATTGTTTGGGAAGAAGTCATCGAAATCAAATATTTCAAAAGGAAGAGAGAAGCTTGTTAATCAAAAGGAAGGAGTGGTGACTTCCAAGGTATCAGAAACTGATTTGGCTTTAGATCCAACCCCCAATACCGTTGCCAAAAATGAGGAAGAGCTGGTGCTGGAGAATGATGAGTCAGAAACTGTTTTAAATGAAAATCAAGAAATAAACACAGTGGGATCTGTTCTCCAAGATTCACCACCTGATTCAGAGAAAATAAAGCTGGAGGAAGCAGCAACAAAGGCACAGGCTGCTTTCAGGGGTTACTTGGCACGAAGGGCATTTAGGGCCCTAAAAGGCATAATAAGGTTGCAAGCACTTATTCGTGGGCACCTTGTTAGGAGACAAGCTGTGGCTACATTATGCTGTATGTATGGCATTGTCAAGTTACAAGCACTTGTTCGTGGCAGAAGAGTCAGACAGTCTCATGTTGGGTTTGAAATCCAAGAGAAGTGCAATCTATTGAAGTCTCCGGATGGCAAACCTGTCAAGCCAATTGCTGTACCTGCAAAAATTACAAATCTGTCAGCCAATGCTTTCATCCGAAAGTGTCTTGCTTCATCAACTACTATAATGGCCCTGCATTTGCAATATGTTCCTGGAGATCCAAATTCAGTTCTAAGCTGGTTGGAGCGCTGGTCAGCAACTAACTTTTGGAAACCAGTCCCCCAACCAAAGAAAATTCGAGACACTAAGCATCAGAGAAAGCAGGGTACTATTTCAGTGGGAGAAGCTCCATTGAGCAAGTCAAGACGCACCACCCGGAAGGTTCCTGCTGCAAGTTTTGACCCTGCCCCAGTGCAAGCAAATCCTGAACTTGAGAAGCCAAAACGAAGCTTGAGGAAAATTTCAAGCCAGCCCTCAGATACTCTGCAGGAAAACCCACAAAGTGAGCTTGAAAAGGTAAAGCGTAACTTGAGAAAGGTTCACAACCCAGTTGTTGAGAATGCTGTTGTCCCAGAAGTAGAACCCGAGGCCCCAAAGCAACATTTGGAAAAGGGGGCATTTACCCCAGTGCATGGTGTTTCGGAACAAGGGGTAACTAGTTCTGATGAGAAGAATAACAAAGAACCAACTTTAACCATTTCTAATGTGCCCGATACAGAACCTGCTACAAATTATATTAGTAAGGAGGTGTCTGATATGCCAAGCCATTATCAAGTGGTTGTGCAACCAAAGCCTTTGACCGATATTATAAGTAAAGATGAAAACATTGCTGAAGATGAAGTGAAAACAGAGCCAAAAGATTTACCAGAGACTAGTTGCAAGGTTGAAAATTCTCACATAACAAATGGAGATTTGAGTCACAAGGAAGATCCTGTGGGAACTGAAAACCAGAAGCCGAACAGAAAGGCCTCAAATGTAGTGAAGCAAGAGCGTGCTGAGAATGGTTTACAGAACAGTCCAACTTTACCAAGTTACATGGCAGCAACTGAATCTGCCAAGGCAAAGTTGAGGGCTCAAGGATCCCCACGATTAGGACACGATGGAAGTGAGAGAAACAATGTTGCTCGGAGACATTCTCTGCCATCTTCAACTAACACCAAAATTAGCTCACAGTCACCTAGGACACAGAGACCAGTCCAATCAGGTGGCAAAGGAAGCAACAAACCTGTACCTTCTAGAGACGGCAATGGAAAGGTAATTCAAGCAGAATGGAGGAGGTGA 1740 0.4374 MGKSPGKWIKTVLFGKKSSKSNISKGREKLVNQKEGVVTSKVSETDLALDPTPNTVAKNEEELVLENDESETVLNENQEINTVGSVLQDSPPDSEKIKLEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLCCMYGIVKLQALVRGRRVRQSHVGFEIQEKCNLLKSPDGKPVKPIAVPAKITNLSANAFIRKCLASSTTIMALHLQYVPGDPNSVLSWLERWSATNFWKPVPQPKKIRDTKHQRKQGTISVGEAPLSKSRRTTRKVPAASFDPAPVQANPELEKPKRSLRKISSQPSDTLQENPQSELEKVKRNLRKVHNPVVENAVVPEVEPEAPKQHLEKGAFTPVHGVSEQGVTSSDEKNNKEPTLTISNVPDTEPATNYISKEVSDMPSHYQVVVQPKPLTDIISKDENIAEDEVKTEPKDLPETSCKVENSHITNGDLSHKEDPVGTENQKPNRKASNVVKQERAENGLQNSPTLPSYMAATESAKAKLRAQGSPRLGHDGSERNNVARRHSLPSSTNTKISSQSPRTQRPVQSGGKGSNKPVPSRDGNGKVIQAEWRR* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2985 579 PANTHER PROTEIN IQ-DOMAIN 31 1 562 - -
Ahy1g2985 579 MobiDBLite consensus disorder prediction 528 560 - -
Ahy1g2985 579 MobiDBLite consensus disorder prediction 424 446 - -
Ahy1g2985 579 MobiDBLite consensus disorder prediction 419 579 - -
Ahy1g2985 579 MobiDBLite consensus disorder prediction 366 395 - -
Ahy1g2985 579 Gene3D - 96 145 - -
Ahy1g2985 579 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Ahy1g2985 579 MobiDBLite consensus disorder prediction 454 469 - -
Ahy1g2985 579 PANTHER IQ-DOMAIN 5-RELATED 1 562 - -
Ahy1g2985 579 SMART iq_5 98 120 IPR000048 GO:0005515
Ahy1g2985 579 SMART iq_5 121 142 IPR000048 GO:0005515
Ahy1g2985 579 MobiDBLite consensus disorder prediction 247 322 - -
Ahy1g2985 579 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Ahy1g2985 579 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Ahy1g2985 579 ProSiteProfiles IQ motif profile. 123 145 IPR000048 GO:0005515
Ahy1g2985 579 MobiDBLite consensus disorder prediction 356 395 - -
Ahy1g2985 579 Pfam Protein of unknown function (DUF4005) 483 561 IPR025064 -
Ahy1g2985 579 MobiDBLite consensus disorder prediction 483 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2985 Ahy-Chr1 111652644 111658362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2985 1 579 IQD Protein Family AT1G74690 45.156 7.99e-129 388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1876 11 122391018 122396716 Ahy1g2985 1 111652644 111658362 hybridization