Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2973 ATGGAGGGAGGTGATGACTTCCACCACCATCACCATCATCACCAACACCACCACCACCGACAGAACTTCCCCTTCCAACTTCTAGAGAAGAAAGAAGATCAAGAAGCAGCGTCGTGCTCAACTTCCTCCCCTTACCCTTCCCTAGCTATCTCATCTGCAGAACCATCCACTTCAAATTCAAACCGATCCAATCCAAACAGCAACACTGCAAACAACAACAATAACAACAGCAACAACAACCAATTAGCCTTACAACAAGAACAGCAAATACAGCCTTCTTTATCCTCTGAACCTTCTGGAAAGAAGCCTCCTCCTAAGCGGACATCCACCAAGGACCGCCATACAAAAGTCGATGGCCGTGGCCGCCGCATCCGAATGCCAGCTCTCTGTGCAGCCAGAGTGTTCCAGCTGACACGAGAGCTCGGCCACAAGTCCGATGGCGAGACCATCGAGTGGCTCCTCCAGCAGGCGGAGCCAGCCGTGATCGCCGCCACCGGAACCGGAACAATCCCCGCAAACTTCACGTCCCTCAACATCTCCCTCCGCAGCAGCGGTTCCTCCATGTCCGTACCATCCCAGCTCCGATCCTCATACTTCAGCCCTAACTTCCCCCTCCAAAACCGCCGAACCTTGTTCCCCGGAATAACCCTCTCGTCCGACACCACCACCGCCAGTAACAACAACAACAGCAACAACAACACCACCACTCTCCTTAACTTCCAACAGCAACAGCAAACCCTAACCGCAAATATTTTCAAGCAAGAACTGAGAGAGAGCCATGGCGCTCCCTCTTCTTCTTCCACGTTGGATTTATCTGAAACAAGCGCGGAAGAAGGTTCGTTAGGGAGAAAGAGAAGGCCGCCATCGGAACACGACCTATCTTCTTCAGCACAGCACCAAATGGGAAGCTACCTGCTGCAATCAAGCGCAGGCGCGATTCAGGCGAGCCACGCAGCTCAGATTCCGGCCAACATATGGATGGTGGCGAATTCCCAAAATGCCCCTCAGGTTATGAGTGGTGACCCTATATGGACGTTTCCAACGCAGGTTAGTAACAGTGGGTTGTACCGTGGAACCGTTTCCAGTGGTTTGCACTTTATGAACTTCCCTACTCCTATGGCTTTGTTGCCGAGTCAGCAATTAGGTTCTTCCGGTGGCGGAGGCAGTGTCAACGAAAGCCATTTGAATATGATCGCCGGTCTCGGCAGTTACCGTCCGGTCATCGGAGTTTCAGAATCGTCTCAGGCCAGTGGCTCTCATCAACATCATCGAGATGGAACCGATGATCGACACGATAGTACCAGCCACCACTCTTGA 1317 0.5247 MEGGDDFHHHHHHHQHHHHRQNFPFQLLEKKEDQEAASCSTSSPYPSLAISSAEPSTSNSNRSNPNSNTANNNNNNSNNNQLALQQEQQIQPSLSSEPSGKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSYFSPNFPLQNRRTLFPGITLSSDTTTASNNNNSNNNTTTLLNFQQQQQTLTANIFKQELRESHGAPSSSSTLDLSETSAEEGSLGRKRRPPSEHDLSSSAQHQMGSYLLQSSAGAIQASHAAQIPANIWMVANSQNAPQVMSGDPIWTFPTQVSNSGLYRGTVSSGLHFMNFPTPMALLPSQQLGSSGGGGSVNESHLNMIAGLGSYRPVIGVSESSQASGSHQHHRDGTDDRHDSTSHHS* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2973 438 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 12 438 IPR005333 GO:0003700
Ahy1g2973 438 ProSiteProfiles TCP domain profile. 110 164 IPR017887 -
Ahy1g2973 438 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 12 438 - -
Ahy1g2973 438 MobiDBLite consensus disorder prediction 104 123 - -
Ahy1g2973 438 MobiDBLite consensus disorder prediction 257 275 - -
Ahy1g2973 438 MobiDBLite consensus disorder prediction 1 124 - -
Ahy1g2973 438 MobiDBLite consensus disorder prediction 411 438 - -
Ahy1g2973 438 Pfam TCP family transcription factor 108 248 IPR017887 -
Ahy1g2973 438 MobiDBLite consensus disorder prediction 277 292 - -
Ahy1g2973 438 MobiDBLite consensus disorder prediction 216 235 - -
Ahy1g2973 438 MobiDBLite consensus disorder prediction 22 36 - -
Ahy1g2973 438 MobiDBLite consensus disorder prediction 418 438 - -
Ahy1g2973 438 MobiDBLite consensus disorder prediction 257 298 - -
Ahy1g2973 438 MobiDBLite consensus disorder prediction 37 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2973 Ahy-Chr1 111395901 111397912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2973 95 380 TCP Transcription Factor Family AT3G47620 47.851 7.38e-62 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy1g2973 TCP 2.20E-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2973 - - pvu:PHAVU_003G190900g 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1889 11 123697086 123699113 Ahy1g2973 1 111395901 111397912 hybridization
Ahy5g1654 5 45333520 45335859 Ahy1g2973 1 111395901 111397912 PCT