Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2964 ATGAAAAAGCGGCAAGTGGTGATGGTGAGAAGAGATGCTTCTGCTTCGGATAATAACAACAATAATAATAATAATAATGTTGTTAAGTACGGAGAGTGTTTGAAGAATCATGCTGCCAATAGCGGTGGATATGCCGTGGATGGTTGCAGAGAGTTCATGGCCAGCGCCGCCGAGGGAACCACCGGGGCTCTTACCTGCGCCGCTTGTGGCTGCCATAGAAACTTCCATAGAAGAAAGGAACTAGCTGCACCATCCAGGAATGAGGACAATATCATGTGA 279 0.4695 MKKRQVVMVRRDASASDNNNNNNNNNVVKYGECLKNHAANSGGYAVDGCREFMASAAEGTTGALTCAACGCHRNFHRRKELAAPSRNEDNIM* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2964 92 MobiDBLite consensus disorder prediction 1 24 - -
Ahy1g2964 92 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 29 79 IPR006456 -
Ahy1g2964 92 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 30 79 IPR006456 -
Ahy1g2964 92 Pfam ZF-HD protein dimerisation region 28 80 IPR006456 -
Ahy1g2964 92 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 21 81 - -
Ahy1g2964 92 PANTHER MINI ZINC FINGER PROTEIN 2 21 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2964 Ahy-Chr1 111191547 111196793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2964 1 79 Zinc finger-homeobox gene family AT3G28917 59.036 2.20e-27 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Ahy1g2964 ZF-HD_dimer 2.50E-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2964 - - adu:107468004 152.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1905 11 124245445 124246759 Ahy1g2964 1 111191547 111196793 hybridization