Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2961 ATGGCTTCTTGCAACTTCTTCAACCCTCAACAAATTGATGATCCTTTCCCACTTCCCACCCAATTTTCCGTATATGATTATGATTATTATTCTTTCTGTGGAAACACTAACGAATATCCACCACTGGGATGTTGGGCACACGAGTTTTCAATACAAGACATGGAGTGTTACCCTTCACTTCCGTTTTATGAAACTCTTTCCATCGAGCCAATTTCAACTATTAAAGACTATGACTTTTATGATATCAAGAAAGGGTTTTCTGTCTGGAACGAAGTGGATGCCGGCTTTGATTGTTCAGAAAAAGTTTCATCATCATCATTACTTTCCAACAAAAACAATGAAGAAGATAAGAGCATCCGGAGGGTTATGAATAAACGAGTTTGTAGAGAAGAGAGAAGTAGCAACAGTACGAAAATGTTATCAAGGAAGATGATATCGGAGTATTTCTACATGCCAATAACTCAAGCAGCGAAGGAACTTGATGTGGGCTTAACTCTTTTGAAGAAGAGATGCAGAGAGTTAGGGATTCGAAGGTGGCCTCATCGAAAACTTATGAGCCTTCAAACCCTCATCAATAATGTTCAGGAGCTAGGGAAGGAAGAGGGGAGAGAGAGTGAAGAGAAGCTAAGGAATGCAATTGAGATATTAGAGAAGGAAAAGAAGCTTCTGGAAGAAATGCCTGATTTGCAACTTGAAGACAATACCAAAAGACTTAGACAAGCATGCTTCAAGGCTAATTACAAGAAGAGGAAGCTCATGATGGGTTGTACTTCAAATTCATCCATGGAATCTTCGTCTTCATCATCATATCATATTATTGGACATAATGCATTAAGAACAGCTAGTCAGAGTAACACAATGGGTGGTGTTAAATTTATTAGCTTTGATGATGATGAATATCATGAACGAGACATCAAATCTGTGTTGTCTTTGCCTTCTTTCTCCCACAACATTCAAATGTGTTCTAGCTATATGTTTAATCACCCAAGTGGTGAATGA 999 0.3834 MASCNFFNPQQIDDPFPLPTQFSVYDYDYYSFCGNTNEYPPLGCWAHEFSIQDMECYPSLPFYETLSIEPISTIKDYDFYDIKKGFSVWNEVDAGFDCSEKVSSSSLLSNKNNEEDKSIRRVMNKRVCREERSSNSTKMLSRKMISEYFYMPITQAAKELDVGLTLLKKRCRELGIRRWPHRKLMSLQTLINNVQELGKEEGRESEEKLRNAIEILEKEKKLLEEMPDLQLEDNTKRLRQACFKANYKKRKLMMGCTSNSSMESSSSSSYHIIGHNALRTASQSNTMGGVKFISFDDDEYHERDIKSVLSLPSFSHNIQMCSSYMFNHPSGE* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2961 332 Pfam RWP-RK domain 140 187 IPR003035 -
Ahy1g2961 332 ProSiteProfiles RWP-RK domain profile. 123 207 IPR003035 -
Ahy1g2961 332 PANTHER PROTEIN RKD4 46 269 IPR044607 GO:0003700
Ahy1g2961 332 Coils Coil 199 226 - -
Ahy1g2961 332 PANTHER PROTEIN RKD1-RELATED 46 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2961 Ahy-Chr1 111176175 111177871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2961 126 251 AtRKD Transcription Factor Family AT1G18790 70.312 2.33e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Ahy1g2961 RWP-RK 2.10E-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2961 - - adu:107470725 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1907 11 124264101 124265873 Ahy1g2961 1 111176175 111177871 hybridization