Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2949 ATGGAAAAAGTGGCATCATTGGTGTTGAAGGAAGAGGAGCAGATGGATTTGCCACCGGGGTTTCGGTTTCACCCAACTGATGAAGAGCTCATAACCCATTACCTATACAAGAAAGTTATTGACACCAACTTCGCCGCGAGAGCCATTGGCGAAGTCGACCTTAACCGCTGCGAGCCTTGGGATTTGCCATGGAAAGCGAAAATGGGAGAGAAAGAATGGTATTTCTTCTGTGTGAGGGATAGGAAGTATCCGACCGGGTTGAGGACAAACCGGGCGACCGAGTCTGGGTACTGGAAGGCAACCGGGAAAGACAAGGAGATTTTTCGAGGCAAATCGCTCGTCGGAATGAAGAAAACGCTTGTCTTCTACAAAGGAAGAGCACCAAAAGGAGAGAAAACAAACTGGGTCATGCACGAGTTCAGGCTGGAGGGGAAATTCTCCATCCATAACCTCCCAAAAACCGCAAAGAACGAGTGGGTGATTTGCAGGGTGTTTCGGAAGAGTTCAGCTGGCAAGAAGGTTCACATCTCTGGAATCATGAGGCTCGACACTTTCCGAACCGAATTGGATTCTTCCGGTCTACCTCCCTTGACGGAGACCTCGCCCTCTTTCGACACCATCCATGACGAATCGCCTTACGTGCCCTGCTTCTCCAATCCAATTGATGTTCCAAGAAACCAAGCCGCAGGCGGAAGCGGAGGAGGAGGAGGAGTCTTTGGTGGTTCCTTCCCCAACAACTCCTCCTCTTCTGTTCCCGCCTATGCGGTTTCTTCCAACATTCTCCCAAGGATGCCGATTTGCGGCGGTTCCTTGTACTCTACTCAACATCAAGATCAGAGTATCCTGAGGGCGTTGTATGAATCGAACGAAAGGGAAATGATCAGTGTGTCACAGGAAACAGGCCTCACTACTGAGATGAACGTGGAAACCAATTCCGTGGTGTCCAATTTTGATTTAGGGAGGGCTCACTTTGAGAGTTTGTGGAATTACTGA 993 0.4965 MEKVASLVLKEEEQMDLPPGFRFHPTDEELITHYLYKKVIDTNFAARAIGEVDLNRCEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATESGYWKATGKDKEIFRGKSLVGMKKTLVFYKGRAPKGEKTNWVMHEFRLEGKFSIHNLPKTAKNEWVICRVFRKSSAGKKVHISGIMRLDTFRTELDSSGLPPLTETSPSFDTIHDESPYVPCFSNPIDVPRNQAAGGSGGGGGVFGGSFPNNSSSSVPAYAVSSNILPRMPICGGSLYSTQHQDQSILRALYESNEREMISVSQETGLTTEMNVETNSVVSNFDLGRAHFESLWNY* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2949 330 Gene3D NAC domain 26 171 IPR036093 GO:0003677|GO:0006355
Ahy1g2949 330 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 303 - -
Ahy1g2949 330 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Ahy1g2949 330 ProSiteProfiles NAC domain profile. 17 167 IPR003441 GO:0003677|GO:0006355
Ahy1g2949 330 SUPERFAMILY NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
Ahy1g2949 330 PANTHER NAC DOMAIN-CONTAINING PROTEIN 100 7 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2949 Ahy-Chr1 110960122 110961669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2949 15 325 NAC Transcription Factor Family AT5G07680 58.255 8.26e-127 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy1g2949 NAM 1.40E-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2949 - - gmx:100170719 458.373