Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2942 ATGTCTCCCCCATCCGTCGATCAAGGTAACGCCGATCCAGAGGAAGAAGAAGAAGAAGAAGTAGAAGAAGAAGTAGAAGAGGAGGTAGAGGAGGAAGAAGAAGAAGAGGAAGATGTACAGGAAGAGGAAGAGGAAGAGGAGGAAGAAGAGGTAGAGGTAGAGGTAGAGGAAGAGGTAGAAGAAGAGGTAGAAGAAGGAGAAGAAGAGGAGGAGGTAGAGGAAGAAGAAGAGGAGCCAGAGGAGGTAGGGGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAAGAAGAAGAAGAAACCGACGGTGATGATAAAGGCTACGCCTCAGATTCTGTATCCGATGCCGACAACGATCGCATAGATTCATGCCAACAAATGGAATCTGAAGTACAAGAGAGGAACTTGAGGCCAACTTATACTATGGCGGAAAACCCTATAGTAATGTCTTCTCCTAGTATGCCATCCAATGAAGAGAATCATGCCATTCTCAAAGCATCTAGTCCTTCATCTGAGGAACTAAGTTTTAAAAAGGAAGACGTTCACGCAACACGCGAAATTTCAAGTCATCCCAAATCAGTAAATGATTTTGCTTCCGCTAAAGATGGCAAAAGTCAAGTTTTAGACTCCAGCCAACAGATGAAATCTGAGGGACTAGGGGGGGACTTGAGGCCAGCTTCTACCGTGGCAGAAAACCCTGTAATAAAGCCTTCTCCTAGTCTGTGTTCCAAAGAAGAGAATTGTGTCATTCTCAAAGCATGTGTTGTTTCTGCTCCTTCATCTGACACGCTAGCTTTGAAAAAGGAACAAGTTTTCCCAACTCCAAAAATTTCAAATTCTTGTCATCCCAAATCAGTTAAAGACTTGGCCCCAGCAGATGATGGCAAAAGTCAAGTTTTAGATGTTGATGGTGCAAATACTGGAATTGTTCAACTAACATACAATGTTGGAGGGTGCAATGAACCAAGTAACGATAGCAAAGCTGATTTAGGTGGTGTTAAGGATATGGATTCTGGGGCCACCAAGTTGTCTAGTAACATTGGAAAAGACATCGCTATTGGCCTTCCTCAAACGGATGCCTTTGTTGGGAGTGCCAATGGCAGTCAGAATTCCTTGAAAAGAAATGTACCATTGGAAGTAGAATCAAAGGATGATGTAAAACAAATCAAATCAAGGACTATAGTTCCGTCTTCGAATACTGAGATGAAGGATGGAAACAAACACCAGGGAATTATATGTGCCTTTTTTGCTAAAGGGTGGTGCATCAGAGGTAATTCCTGTAGCTTTCTTCATATAAAAGATTCTGCAAAGGATACTGGCCAGGAGACTCAGGGGGACTTGGATAAAGCAAAGCAGAAGAGAGAACTGGAATTAGAAGAAGGTACCAGGGACAATATCAAAAGAACCAGGACGAATGACCAAGAAGAAATCTCAGACTGGCATCCTTGTCAAGAAAAAAATAAGTACCAGTTGAGGGACATCTTGTTTCCAGAGAGTAGATTTACAAGCAAATATTTCAACACAAATCTCTCATCCTGTTCAAATCATGCAGAGGGATTGAGTATAGCTCAAAACCATCATATGTACAATGGATATACTTCTGCAGTTTTGAGTCGTTCACCTAAGTTGAGCTTTGTTACTCAGAAACTTTTGAATAGTGACAAGGAATATAATGCCTCTAGATCTGCTTTCTCTGGCTCAGAGCGGGAGGAGTTGCCGTCGGTTGGTTCATCTAGGATTCCAATACACTCTGCCGCATATATATCAAAAATATGTTCTTATGATTGGGAACCTTCTGTGCCATTTCGACCATCATTTTTCATTACGTCAATGAATGTATCATCTCTGGGAGACCTGTATGACCCTCTTCGAGATAGCATTGAGATACCAAATATAGGAGATGGGTCTTTGAAAGCTTCCCTCTTAATTCATGGATCATCCATCCAGGCTTCATCACAGGTGCTGAAATATGGCGATTCAGCTGTAGTTGGGAAACATATGTCTGATTTTAATGATGAGAAAAGTTCTGTATCTTCTCATAATAGATTTGGTGAGAACCAACCAAACAAAAATTTGGTTCCTCATGAAAAAGATTGTCATGCAACTGAAATGGAAATAACATCAGGGACTTGTATGAACTACCCCAATGGTAAAATCGGCATGGGGAAAGATGTTACAAAATCAGAGAGAGAATGGACTGAACATGATGCCAAACATCATGGTGAAGGATCAGCGCACAAGAAGAGAGTAGATAGGGATAAGAAAATTAATGATACAGATGCCGATTTGCAGACTGACTGCAGTGTGCAGAAGGATTCCAAAGCAATGAGACACTTTCGTGCAGCTCTTGTTGACTTGGTGAAAGAGTTGTTAAAACCATCTTGGCACGAGGGCCGTCTTAGTAAGGATGCACATATCTTGATAGTTAAAAGATCAGTTGACAAGATACTCAGCACCTTAGAGCCTCAGCAAATTCCAACCACTATAGATGCTACTAAGCAATATGTTTCTTTGTATCGAGGAAAAATTGCAAAGATGGTCAATGGATATATCAACAAATTTGGCAAGTCTTGA 2601 0.4156 MSPPSVDQGNADPEEEEEEEVEEEVEEEVEEEEEEEEDVQEEEEEEEEEEVEVEVEEEVEEEVEEGEEEEEVEEEEEEPEEVGEEEEEEEEEEEEEEEEEEEEEEEEEETDGDDKGYASDSVSDADNDRIDSCQQMESEVQERNLRPTYTMAENPIVMSSPSMPSNEENHAILKASSPSSEELSFKKEDVHATREISSHPKSVNDFASAKDGKSQVLDSSQQMKSEGLGGDLRPASTVAENPVIKPSPSLCSKEENCVILKACVVSAPSSDTLALKKEQVFPTPKISNSCHPKSVKDLAPADDGKSQVLDVDGANTGIVQLTYNVGGCNEPSNDSKADLGGVKDMDSGATKLSSNIGKDIAIGLPQTDAFVGSANGSQNSLKRNVPLEVESKDDVKQIKSRTIVPSSNTEMKDGNKHQGIICAFFAKGWCIRGNSCSFLHIKDSAKDTGQETQGDLDKAKQKRELELEEGTRDNIKRTRTNDQEEISDWHPCQEKNKYQLRDILFPESRFTSKYFNTNLSSCSNHAEGLSIAQNHHMYNGYTSAVLSRSPKLSFVTQKLLNSDKEYNASRSAFSGSEREELPSVGSSRIPIHSAAYISKICSYDWEPSVPFRPSFFITSMNVSSLGDLYDPLRDSIEIPNIGDGSLKASLLIHGSSIQASSQVLKYGDSAVVGKHMSDFNDEKSSVSSHNRFGENQPNKNLVPHEKDCHATEMEITSGTCMNYPNGKIGMGKDVTKSEREWTEHDAKHHGEGSAHKKRVDRDKKINDTDADLQTDCSVQKDSKAMRHFRAALVDLVKELLKPSWHEGRLSKDAHILIVKRSVDKILSTLEPQQIPTTIDATKQYVSLYRGKIAKMVNGYINKFGKS* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2942 866 ProSiteProfiles Zinc finger C3H1-type profile. 421 443 IPR000571 GO:0046872
Ahy1g2942 866 MobiDBLite consensus disorder prediction 1 235 - -
Ahy1g2942 866 MobiDBLite consensus disorder prediction 10 114 - -
Ahy1g2942 866 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 65 866 - -
Ahy1g2942 866 MobiDBLite consensus disorder prediction 115 136 - -
Ahy1g2942 866 MobiDBLite consensus disorder prediction 680 703 - -
Ahy1g2942 866 MobiDBLite consensus disorder prediction 181 198 - -
Ahy1g2942 866 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 421 440 IPR000571 GO:0046872
Ahy1g2942 866 MobiDBLite consensus disorder prediction 738 766 - -
Ahy1g2942 866 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 65 866 - -
Ahy1g2942 866 Coils Coil 11 113 - -
Ahy1g2942 866 MobiDBLite consensus disorder prediction 137 180 - -
Ahy1g2942 866 SUPERFAMILY CCCH zinc finger 417 440 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2942 Ahy-Chr1 110832748 110837180 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Ahy1g2942 zf-CCCH 5.40E-05 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2942 - - adu:107468208 1514.59