Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2930 ATGGCTTCTTGCAATTACTTCTTCAACCCTCAACAAATAGATGAATATCCTTTCCCTCTTCCCATTCAATGTTCCTTATATGATTATGATTATTACTATTATTCCAGTGAAAACAGTAACGAATATCCACCACTGGAATGTTGGGCACACGAGTTTTCAATACAAGACATGGAGTGTTACCCTTCACTTCCTTTTTATGAAACTCTCTCCATCGAACCAATTTCAACTATTAAAGACTATGACTTTTATGATATTAAGGAAGGGTTTTCTGTCTGGAACGAAGTGGATGCCGGCTTTGATTGTTCAGAAAAAGTTTCATCATCATCATCACTTTCCAACAACAACAACAATGAAGAAAATAAGAGCATCAGGAGGGTCATTAATAAACGAGTTTGTAGAGAAGAGAGAAGTAGCAACAGTACGAAAATGTTATCAAGGAAGATGATATCGGATTATTTCTACATGCCGATAACTCAAGCAGCGAAGGAACTTGATGTGGGCTTAACACTTTTGAAGAAGAGATGCAGAGAGTTAGGGATTCGAAGGTGGCCTCATCGGAAACTTATGAGTCTTCAAACCCTCATCAATAATGTTCAGGAGCTAGGGAAGGAAGAGGGGAGAGAGAGTGAAGAGAAGCTAAGGAGTGCAATTGAGATATTAGAGAAGGAAAAGAAGCTTCTGGAAGAAATGCCTGATTTGCAACTTGAAGACAATACCAAAAGACTTAGACAAGCATGTTTCAAGGCCAACTACAAGAAGAGGAAGCTAATAATGGGTAGTAGTTCTTCAAATTCATCCATGGAATCTTCTTCATCATATAACATTATTGGACATAATGCAACAAGAATAACTAGTAGTAAGGGAGACACGATGGATAGTGTTGGATTTATTAGCTTTGAGGATGAAGAAGATCAAGAACGTGACATCAAATATGCGTTGTCTTTGCCTCCTTTGTCCCATAACATTCAAATGGTCTAG 978 0.3793 MASCNYFFNPQQIDEYPFPLPIQCSLYDYDYYYYSSENSNEYPPLECWAHEFSIQDMECYPSLPFYETLSIEPISTIKDYDFYDIKEGFSVWNEVDAGFDCSEKVSSSSSLSNNNNNEENKSIRRVINKRVCREERSSNSTKMLSRKMISDYFYMPITQAAKELDVGLTLLKKRCRELGIRRWPHRKLMSLQTLINNVQELGKEEGRESEEKLRSAIEILEKEKKLLEEMPDLQLEDNTKRLRQACFKANYKKRKLIMGSSSSNSSMESSSSYNIIGHNATRITSSKGDTMDSVGFISFEDEEDQERDIKYALSLPPLSHNIQMV* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2930 325 Pfam RWP-RK domain 144 191 IPR003035 -
Ahy1g2930 325 ProSiteProfiles RWP-RK domain profile. 127 211 IPR003035 -
Ahy1g2930 325 PANTHER PROTEIN RKD4 40 270 IPR044607 GO:0003700
Ahy1g2930 325 Coils Coil 203 230 - -
Ahy1g2930 325 PANTHER PROTEIN RKD1-RELATED 40 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2930 Ahy-Chr1 110669772 110671420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2930 130 255 AtRKD Transcription Factor Family AT1G18790 69.531 6.50e-57 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Ahy1g2930 RWP-RK 2.80E-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2930 - - adu:107470725 487.263