Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2915 ATGGAAGAAGAAGATCATCATCATCAAGAACAAGAACTGATGAGGCACGTGTGCAAGTTCTGCAACAAGAGCTTCCCTAGTGGAAGATCCTTAGGGGGTCACATGAGGTCTCACGTGACCAACAACACCCATGAAGCCGAAGAGAAAGAGAAGCTTTCATCATCTGAAGCTGGAACAATCACTAACAACAGCAGTGGCTATGGTTTGAGGGAGAATCCCAAGAAGACATGGAGGATCATTGCGGATTCATCAACTAATAGTGAAGACAACAACAACAACAACAACAACAATTCTTCTTCTTTTTCTTCTTTGTTGATGTGTGACAAGCTTTGCAAAGAGTGTGGAAAAGGGTTCAGTTCTTGGAAGGCCTTGTTTGGCCACATGAAACGCCATTCCCACTCGTCTTCTGCTTCTGCCTCTGATCAAGATTCTTGTTGGACAACGAAGAAGCTTCTTGTAATGGATTCACAATCTGATAATGAAGCCACTACTGCTGCTCCTCCAAGAAGGAGAACAAGGTCAAAGAGGAAAACAACAAGAAGGTATAACATTGCTTCTGCTTCGACGACTAGTTTCGCTGCGAAAACTTCTTGTTCTGTTTACTCTGAGGCTGAGGTTGAGGTTGAGATTGAGCAGGAGCAAGAGGAGGTTGCTATGAGCTTGATGATGCTTAGTAGAGATGTTGGTAATTGGTGGAGTGCTCGTGATGGTGGCGTTCATTCTCTTGCTGAGTCTTCTTCGGTTGTTAGGACTAGAATTCAGGACAAGAAGATGATGAAGATCAATGCTTGTTCTGAGGTTGGAAGAGTAGGAAGAAGCGCAGAACTTTTGGATTTGGATTTGGAGGATGATGGATTTGAACATGGCAAGAAGTACAGTTCAATCAAGGAGAAGATTTCGGATTGTTCGAATTCGAATTCGGCTAATAAGAGGGGAAAGTTTGAGTGTACTACTTGCAAGAGGATCTTCCATTCTTATCAAGCACTTGGAGGGCATAGAGCAAGTCACAAGAAGATTAAGGGATGCTTTGGTTCAAACAATGATAGCAGCATTCAGATTGAGATTGAGATTGAGACTGAACTCTCTCCTAACAACAAAATTGAGAGTTTACAGAATGAAGAACTTGGTTTTGATGATTATGATGATGATGATGATGATGAGGCTGAAGAAGAAGATAACAAGACAGCAAAGAAGGTAAACAAAGTTCATGAGTGTCCAATTTGCCTGAAAGTTTTTGCTTCTGGACAAGCATTGGGTGGACACAAGAGATCTCACACTGCCAAAATTGAGGAACAGGAAGAAGAACAAGTTCAAGAAATTAGGGTTAGGGATTTGCTGGATCTGAATGTTCCAGCAGCAGCGGCTACTACTACTGAAGAGGATGAAACTAACAACAGTTTCAATGCTGATTCTAATAATAACAAGAGACATTGGTGGGAAGAGGCACCACTGCTAGGACTTATCTCTCTTAACTAA 1476 0.4201 MEEEDHHHQEQELMRHVCKFCNKSFPSGRSLGGHMRSHVTNNTHEAEEKEKLSSSEAGTITNNSSGYGLRENPKKTWRIIADSSTNSEDNNNNNNNNSSSFSSLLMCDKLCKECGKGFSSWKALFGHMKRHSHSSSASASDQDSCWTTKKLLVMDSQSDNEATTAAPPRRRTRSKRKTTRRYNIASASTTSFAAKTSCSVYSEAEVEVEIEQEQEEVAMSLMMLSRDVGNWWSARDGGVHSLAESSSVVRTRIQDKKMMKINACSEVGRVGRSAELLDLDLEDDGFEHGKKYSSIKEKISDCSNSNSANKRGKFECTTCKRIFHSYQALGGHRASHKKIKGCFGSNNDSSIQIEIEIETELSPNNKIESLQNEELGFDDYDDDDDDEAEEEDNKTAKKVNKVHECPICLKVFASGQALGGHKRSHTAKIEEQEEEQVQEIRVRDLLDLNVPAAAATTTEEDETNNSFNADSNNNKRHWWEEAPLLGLISLN* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2915 491 MobiDBLite consensus disorder prediction 456 473 - -
Ahy1g2915 491 MobiDBLite consensus disorder prediction 374 390 - -
Ahy1g2915 491 ProSiteProfiles Zinc finger C2H2 type domain profile. 403 430 IPR013087 -
Ahy1g2915 491 ProSiteProfiles Zinc finger C2H2 type domain profile. 314 341 IPR013087 -
Ahy1g2915 491 MobiDBLite consensus disorder prediction 40 54 - -
Ahy1g2915 491 SMART c2h2final6 403 425 IPR013087 -
Ahy1g2915 491 SMART c2h2final6 109 131 IPR013087 -
Ahy1g2915 491 SMART c2h2final6 314 336 IPR013087 -
Ahy1g2915 491 SMART c2h2final6 16 38 IPR013087 -
Ahy1g2915 491 MobiDBLite consensus disorder prediction 55 70 - -
Ahy1g2915 491 Pfam C2H2-type zinc finger 402 426 - -
Ahy1g2915 491 Pfam C2H2-type zinc finger 15 38 - -
Ahy1g2915 491 Pfam C2H2-type zinc finger 111 131 - -
Ahy1g2915 491 Pfam C2H2-type zinc finger 314 338 - -
Ahy1g2915 491 SUPERFAMILY beta-beta-alpha zinc fingers 400 428 IPR036236 -
Ahy1g2915 491 ProSiteProfiles Zinc finger C2H2 type domain profile. 109 136 IPR013087 -
Ahy1g2915 491 Gene3D Classic Zinc Finger 3 66 - -
Ahy1g2915 491 SUPERFAMILY beta-beta-alpha zinc fingers 15 43 IPR036236 -
Ahy1g2915 491 PANTHER C2H2-TYPE ZINC FINGER PROTEIN 1 489 - -
Ahy1g2915 491 MobiDBLite consensus disorder prediction 31 74 - -
Ahy1g2915 491 MobiDBLite consensus disorder prediction 156 180 - -
Ahy1g2915 491 ProSitePatterns Zinc finger C2H2 type domain signature. 405 425 IPR013087 -
Ahy1g2915 491 MobiDBLite consensus disorder prediction 454 473 - -
Ahy1g2915 491 ProSitePatterns Zinc finger C2H2 type domain signature. 111 133 IPR013087 -
Ahy1g2915 491 ProSitePatterns Zinc finger C2H2 type domain signature. 316 336 IPR013087 -
Ahy1g2915 491 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 489 - -
Ahy1g2915 491 MobiDBLite consensus disorder prediction 364 397 - -
Ahy1g2915 491 SUPERFAMILY beta-beta-alpha zinc fingers 110 336 IPR036236 -
Ahy1g2915 491 Gene3D Classic Zinc Finger 310 425 - -
Ahy1g2915 491 ProSitePatterns Zinc finger C2H2 type domain signature. 18 38 IPR013087 -
Ahy1g2915 491 ProSiteProfiles Zinc finger C2H2 type domain profile. 16 43 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2915 Ahy-Chr1 110372361 110374497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2915 396 453 C2H2 Transcription Factor Family AT1G26610 52.459 6.79e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy1g2915 zf-C2H2_6 5.60E-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2915 - - aip:107619267 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1993 11 127324481 127326743 Ahy1g2915 1 110372361 110374497 hybridization