Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2907 ATGGAGAAGCCACCGGAGAATCAGTCCAGTCACTTGAAAAATAACTCCTCCACCACCGCCAACCACAACAAGCAAGAAGGAGTGAATAACAATGGCAACCGAACAAAGTACCGTGGCGTGAGGCAGAGGCAGTCAGGCCGTTACACGGCGGAGATAAGAGACCCTCAGTCCAAGAAGCAGCGGTGGCTGGGCACCTACACCACACCGGAGGAAGCTGCTCGTGCCTACGATGCCGCCGCCCGAGCCCTTCGCGGCCATAAGGCCTGGACCAATTTCCTTGATTACCCTACTAATAACAACAACGACCTCGAAAACCCTAACCCTTTTTTGTCTTTTTCTTCCTCCTCCAACATACTTCTTCTCCGGTTTCTTCTGGACTTCATCAACTCCTCCTCCAACCCCTCTCTGGTCTTTTCCGCTCAGCAACTCTACGATCAGTTGTTGCTGAACGGAATAAGCAGCAGCAGCAGCAACAACAATAATAATAATAATAACTGCAGATTAACAGAGACAGTGTTCTCTCACGAGATGATGAGGAACGGTAATTATAATAACTCGGGTGTCCTTTTTGGTCATTTTCCCATGCAAACTGATTTTGATGGTGACTTTAATAATAATAACTTTAGTAGTAGTAATGTGGTTGACAATGGTCATTTGATGGAAGAAGGAAGTGTGTTTCAGTTCCCTGAGATTCATAATCATCATACTCATGATGAGGAGGATCTTCTTGCGGCATTCTGGATCGATGAACACTACTAA 759 0.4625 MEKPPENQSSHLKNNSSTTANHNKQEGVNNNGNRTKYRGVRQRQSGRYTAEIRDPQSKKQRWLGTYTTPEEAARAYDAAARALRGHKAWTNFLDYPTNNNNDLENPNPFLSFSSSSNILLLRFLLDFINSSSNPSLVFSAQQLYDQLLLNGISSSSSNNNNNNNNCRLTETVFSHEMMRNGNYNNSGVLFGHFPMQTDFDGDFNNNNFSSSNVVDNGHLMEEGSVFQFPEIHNHHTHDEEDLLAAFWIDEHY* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2907 252 MobiDBLite consensus disorder prediction 8 39 - -
Ahy1g2907 252 Pfam AP2 domain 35 86 IPR001471 GO:0003700|GO:0006355
Ahy1g2907 252 MobiDBLite consensus disorder prediction 1 63 - -
Ahy1g2907 252 SMART rav1_2 36 100 IPR001471 GO:0003700|GO:0006355
Ahy1g2907 252 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Ahy1g2907 252 PRINTS Ethylene responsive element binding protein signature 59 75 IPR001471 GO:0003700|GO:0006355
Ahy1g2907 252 SUPERFAMILY DNA-binding domain 36 93 IPR016177 GO:0003677
Ahy1g2907 252 ProSiteProfiles AP2/ERF domain profile. 36 93 IPR001471 GO:0003700|GO:0006355
Ahy1g2907 252 CDD AP2 35 92 IPR001471 GO:0003700|GO:0006355
Ahy1g2907 252 Gene3D AP2/ERF domain 35 93 IPR036955 GO:0003700|GO:0006355
Ahy1g2907 252 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 19 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2907 Ahy-Chr1 110112075 110112833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2907 35 156 AP2-EREBP Transcription Factor Family AT1G12980 48.062 9.22e-24 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy1g2907 AP2 1.40E-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2907 - - aip:107611489 409.068