Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2888 ATGGCCGCAAAATTGCTGCATTCTTTAGCAGATGAAAACCCAGATTTGCAGAAGCAAATTGGATGCATGACTGGGATTTTCCAACTGTTTGATCGTCACCAGATAGTTACTCCTCGCCGCATTAGCCACAAGAGGCTTCCTCCTGGTAATTCTCACTCCAATTATGAGAGCATGAGAAGAGATTCTAATAGCATACACCAACGGCAAACAGCTGCTGATATGAACTTAAACAAGGGTGTAAGTGAAAAACAAAGAATTTCAACAGAATCATCAAGGGCTTCATTCTCTTCATCGTGTTCATCGTCAATATCCTCTATGGACTGTAAAGCTCAAGCAGATGCTTCCTTCGACCGGATTACTTTTCCTGAAACTCCTAGAAGGGACCAAGTTATGAACCAAACAAGTACCTCTACAAATTTGGGTCACCAGTCCCTTGACCTGAGGGATGTGGTAAAAGACTCTATGTACAGAGAGGCCAGAGGACTATCAGTGAAGACTACAATCAAAGAAGAAGTTTCCATTCGTGCATCGAAGCAGAAAGATTCACCGAGACCTCTTCATCTGTCCATTTCTGATTATGAATATGATAGAGTTGGAATTGATGGAAAACAAAGTGTGCCTATTGATCTAAAGGAGTCTATCCGAGTCCTTTCTAAGCTTACAGAAGCCCCTTGGCACTATGATGAAGGTAGAGAGGTTCGGAGGTTGCCTTATGAAGTAAAAGATGCACAAAGGCATTCGATCTCAAAGGATGCTCGTCGGTTTTCTTATGATGCAAGGGAAGTACATCGATACTCTTCTGAATCACAAGATACCATCAAATCCACACCAAGACTAAAAGAGCTTCCTAGACTTTCCCTTGACAGCAGGGAAGTTTCTTGGCGTACTTATACCTCTGATTCAAAATCCAATCATCTCTTAAGAAATTTCAGTAGTGGTACTTCCGACTCAGATGACAAAGTCTCAAGTCTGCAACAACGGCCTTCAGCAGCATCACAGAGCCGGCCACCGAGTGTTGTAGCAAAATTAATGGGGTTGGAAGCATTGCCAGCGTCCAATTTAGCCAGTGAGACTCGCTCAATTTTGAGTGAAACTGACCCAACTCAAGGTGATGATCAGTTTTCAAGATCATCAAAAAATGGACTCATTAGGCCATTCAAAGTTTCTAATTCTTCGAAAAGCTCAATGAAAGACCCGAGTTCCCCAAGCAGGAAGAACCCGGATTTGGTTGTGAAACCTATCTCAAGTTCAAGGCATCCCATTGAACCTGCACCATGGAAGCGGCGAGATAGAAATCAAAGTTCACCAAGACCGAGTTCCGCGGCCATGAAGGCTACAAGTATAACAGATTCATTCCCTTCAGTTTACAGTGAAGTTGAGAAGAGATTGAAGAATCTTGAATTTGATCAGTCTGGAAGGGATCTTAGAGCGCTCAAACAGATACTAGAAGCAATGCAAGCAAAGGGGCTGCTAGAGACAAGACAAGAAGAACAAGTTTCAAATCTTGTAGGAAATCAAAGAGACCATGAACCAAAACCTGTGAGTCTAACTCAGAATTCTAGGACAGCAAGGAAACAAAGTCCTCACAGAAACAACATTGCATCTTCAACTTTCGGGGGATCTGACTCAGCAAGGAGCTTTGAATCTCCAATTGTAATAATGAAACCGGCAAAGCACATTGAGAAAAATGGAATTTCATCATCTTCAGTTATTCCACTTGTTGAGCTTTCTGATTCACATAAACTCCAGAGTGTGAGGATGAAGGTACGTACAGGTAATGGAAAGGGTACAGGTTCTGGTCGAATAACAAAAGATCAGTCTCCTAGAAACAATCACAGGGAAGCTTCTACTAGCTTCAGTGAAAAGAAAGCTAGTAGCAAGACTATAAGATCAACACAATCACAACCAAGATCTCAGCAGTTTACAAAAGAAAATAGCCCAAGTTCTGTAAAGAACTCAGGATCTGTTAGCCCAAGATTGCAACAAAAGAAGTTAGAACTTGAGAAGTGTTCTCGCCCACCAACACCTCCATCAGAGTCAAGTAAACCGAGACGACAATCTGGTAAGCAGACCACAGAATCAGGTTCTCCGGGTAGAAAACCGAGGCATAAAGTCCCTATTTCACAACAAAGTGATGACCAACTTAGTGAAATAAGCAATGAATCAAGAAGTTTGAGTTTCCAAGGGGATGAGACATCACTACAATCAGGAAGTACCATAACTGAGTCAAAGATGGATGTGGAATTAGCCAGCAATTTACAATCTGCTGAAACTGTCGAAAGCCAAAGCCCATCTCTTAAGACTATTGAGCAGGTGGTTTCAGGAACAATACAGAAGAAATCAACTCTGATGTTGGATGAGAATGAGCCTATTTCAGAACTTGCAATGGATGCTCCAGATCATCCGAGCCCTGTATCGGTTCTGGACGGCTCAGTATACAGAGAGGATGTGCTATCCCCAGTCAAGCTTATATCCAATGCTCCGAAAGGTGATGTTCAATCTAAAGAAGACGATTATGAATATCAGTGGAACACTGCAGATGATAGCCTTTCAGTTAACAGCGAGATCAACCGCAAGAAATTGCAAAGCATAGATCACCTGGTTCAGAAGCTTAGACGGCTAAACTCGAGTCACGACGAGGCTAGAATCGATTACATTGGTTCCCTTTGCGAAAACTCGAACCCAGACCACAGATACATATCAGAAATACTATTGGCTTCAGGTCTCCTACTCAGAGATCTGAGTTCAGAATTGCTGACATTTCAACGCCACTCGTCGGGTCATCCCATTAACCCCGAGTTATTCCTTGTATTGGAGCAGACCAAGGCAAGTAGCTTTCTTGCTAAAGAAGAAATCGGCATTGAAAAAGTTGATTACAAGAAGACAAACACAGACAAGTCTCACAGGAGATTCATCTTTAATGCTGTGAATGAGATTCTTGGCATGAAACTAGCTTCTTCTCCTGAACCATGGTTGAAGCCTAATGGACTCGCAAAGAAGAACCTCAGTGCACAGAAACTTCTAAAAGAACTGTGCTTTGAGATAGAAAAAATTCAAGTGAAGAAGCCCGAATGCACAGAAGATGAAGGTGATGGTATAAAAAGTATACTATGTGAAAATGTTATGAATGGAACAGAAAGTTGGACAATTTTCCATGGTGAAACATCTGGGGTTGTGTTGGATGTTGAGAGACTGATATTTAAAGACTTAATTGATGAGATTGTGATTGGTGAAGCAACGGGCTTGAGAATCAAGCCAGTTAGACGCAGGAAGCTATTTGGAAAGTAA 3288 0.4197 MAAKLLHSLADENPDLQKQIGCMTGIFQLFDRHQIVTPRRISHKRLPPGNSHSNYESMRRDSNSIHQRQTAADMNLNKGVSEKQRISTESSRASFSSSCSSSISSMDCKAQADASFDRITFPETPRRDQVMNQTSTSTNLGHQSLDLRDVVKDSMYREARGLSVKTTIKEEVSIRASKQKDSPRPLHLSISDYEYDRVGIDGKQSVPIDLKESIRVLSKLTEAPWHYDEGREVRRLPYEVKDAQRHSISKDARRFSYDAREVHRYSSESQDTIKSTPRLKELPRLSLDSREVSWRTYTSDSKSNHLLRNFSSGTSDSDDKVSSLQQRPSAASQSRPPSVVAKLMGLEALPASNLASETRSILSETDPTQGDDQFSRSSKNGLIRPFKVSNSSKSSMKDPSSPSRKNPDLVVKPISSSRHPIEPAPWKRRDRNQSSPRPSSAAMKATSITDSFPSVYSEVEKRLKNLEFDQSGRDLRALKQILEAMQAKGLLETRQEEQVSNLVGNQRDHEPKPVSLTQNSRTARKQSPHRNNIASSTFGGSDSARSFESPIVIMKPAKHIEKNGISSSSVIPLVELSDSHKLQSVRMKVRTGNGKGTGSGRITKDQSPRNNHREASTSFSEKKASSKTIRSTQSQPRSQQFTKENSPSSVKNSGSVSPRLQQKKLELEKCSRPPTPPSESSKPRRQSGKQTTESGSPGRKPRHKVPISQQSDDQLSEISNESRSLSFQGDETSLQSGSTITESKMDVELASNLQSAETVESQSPSLKTIEQVVSGTIQKKSTLMLDENEPISELAMDAPDHPSPVSVLDGSVYREDVLSPVKLISNAPKGDVQSKEDDYEYQWNTADDSLSVNSEINRKKLQSIDHLVQKLRRLNSSHDEARIDYIGSLCENSNPDHRYISEILLASGLLLRDLSSELLTFQRHSSGHPINPELFLVLEQTKASSFLAKEEIGIEKVDYKKTNTDKSHRRFIFNAVNEILGMKLASSPEPWLKPNGLAKKNLSAQKLLKELCFEIEKIQVKKPECTEDEGDGIKSILCENVMNGTESWTIFHGETSGVVLDVERLIFKDLIDEIVIGEATGLRIKPVRRRKLFGK* 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2888 1095 PANTHER LONGIFOLIA PROTEIN 1 1093 IPR033334 GO:0051513
Ahy1g2888 1095 MobiDBLite consensus disorder prediction 39 94 - -
Ahy1g2888 1095 MobiDBLite consensus disorder prediction 305 336 - -
Ahy1g2888 1095 MobiDBLite consensus disorder prediction 681 695 - -
Ahy1g2888 1095 MobiDBLite consensus disorder prediction 584 738 - -
Ahy1g2888 1095 MobiDBLite consensus disorder prediction 357 446 - -
Ahy1g2888 1095 Pfam DUF761-associated sequence motif 332 353 IPR032795 -
Ahy1g2888 1095 MobiDBLite consensus disorder prediction 621 660 - -
Ahy1g2888 1095 MobiDBLite consensus disorder prediction 357 402 - -
Ahy1g2888 1095 Pfam Domain of unknown function (DUF4378) 896 1073 IPR025486 -
Ahy1g2888 1095 MobiDBLite consensus disorder prediction 708 738 - -
Ahy1g2888 1095 MobiDBLite consensus disorder prediction 496 544 - -
Ahy1g2888 1095 MobiDBLite consensus disorder prediction 305 337 - -
Ahy1g2888 1095 PANTHER LONGIFOLIA PROTEIN 1 1093 - -
Ahy1g2888 1095 MobiDBLite consensus disorder prediction 606 620 - -
Ahy1g2888 1095 MobiDBLite consensus disorder prediction 47 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2888 Ahy-Chr1 109730515 109736180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2888 140 1094 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 46.951 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2888 - - gmx:100787391 1323.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2031 11 129391115 129396526 Ahy1g2888 1 109730515 109736180 hybridization
Ahy1g2888 1 109730515 109736180 Ahy20g2422 20 129484734 129489653 PCT
Ahy1g2888 1 109730515 109736180 Ahy10g1935 10 105044416 105049192 PCT
Ahy20g2422 20 129484734 129489653 Ahy1g2888 1 109730515 109736180 PCT
Ahy10g1935 10 105044416 105049192 Ahy1g2888 1 109730515 109736180 PCT