Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2827 ATGGAGCCTATGGACATCGTCGGCAAATCGAAGGAAGACGCTTCGCTTCCTAAAGCAACAATGACAAAAATTATTAAAGAGATGTTACCTCCAGATGTACGTGTTGCAAGAGACGCACAAGATCTATTGATCGAGTGTTGTGTAGAATTTATAAACCTTGTTTCGTCGGAGTCCAATGAAGTCTGTAGCAGAGAGGAAAAACGGACTATTGCACCTGAGCATGTACTGAAGGCTTTAGAGGTCCTCGGCTTTGGCGAGTACATTGAAGAAGTCTATGCAGCATATGAACAGCACAAGCTGGAGACCATGGACTCTTTAAAAGGTGGTGGTAAGTGGAGCAATGGAGCTGAGATGACCGAAGAAGAAGCATTAGCAGAGCAGCAACGGATGTTTGCAGAGGCGCGAGCCAGGATGAATGGCGGGGCTATTGCTTCCAAGCAACCAGAAGCTGACCAAAGTTTAGATAGCTAA 471 0.4586 MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSREEKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKLETMDSLKGGGKWSNGAEMTEEEALAEQQRMFAEARARMNGGAIASKQPEADQSLDS* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2827 156 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Ahy1g2827 156 Gene3D Histone, subunit A 4 143 IPR009072 GO:0046982
Ahy1g2827 156 PANTHER PROTEIN DR1 HOMOLOG 1 155 IPR044255 -
Ahy1g2827 156 PANTHER PROTEIN DR1 HOMOLOG 1 155 - -
Ahy1g2827 156 SUPERFAMILY Histone-fold 12 143 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2827 Ahy-Chr1 108612804 108616033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2827 1 152 CCAAT-DR1 Transcription Factor Family AT5G23090 82.468 1.05e-91 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Ahy1g2827 CBFD_NFYB_HMF 5.50E-22 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2827 K21751 - gmx:100807912 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2094 11 132357429 132360663 Ahy1g2827 1 108612804 108616033 hybridization