Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2811 ATGTATTCATCACCAAATAGTAGTAACACTATTCATCACTTCATCAATGGCAACGACGACCAAGTCTCCCCCTACCCTAATAACCAACCATTATTATTTCCCTCTTCTTCGTCTTCTTCTAATGTTAGGCCTTTTTCAATTGAAAGCAGCCCTTCTTCAAAAGAAGAACAAGCCAATAATAATAATTGTGCTTCTACTCTTCCTCCTTCTCTTCCTCTTTCTCCTCCTCCCACTCCTTCTTTTTCTTTCTTTCAGTTCCCTTACTCTCCATTATTTGAAGACAATGAGATTTTCCTTAACGGAGAATTTCACTTTCTTCATCACCAGTCTCTGGGACAGTCTGATCACAACGATCAGGCAGGAGTAGTAAACATGGAGGTTTCAATCACCAACACTAACAAGAACTCATCAGGGCAAGGCATGACCATCACCACCGCTGCCGCCACCGCCACCACCGCTCCTGTGGCTACAACCACCACCACAAGAAGAAGATCAAGCAAGAGGGACCGGCACAGCAAGATCAACACTGCTAGGGGACTAAGGGACAGAAGAATGAGATTGTCCCTTGAAGTTGTTAGAAGATTCTTCGGTCTTCAAGATATGCTTGGATTCGACAAAGCAAGCAAGACCGTTGAGTGGCTGCTCAACCAAGCGAAAGTGGAGATCAAACAACTCGCAAGGGAGAAGAAGAAGAATCACCAAAGCTGTAGCAGCTTCAATGGCAAAAGCGCCTCTTCAACTTCTGAGTGCGAAGGGGTTTCGAGCTTGGACGAAGTGGCCATAAGCGAAAATCAAGGACATAATGGAAAACTATTACCCACACCAACAACTACCACGAAGACGAAGAAGCGAAGGGGTAGTAACAAAGTTTCAAGGAAAAGCTCATTCAATCCAATTGGTAAAGAATCGAGGGAAAAGGCAAGGGAAAGGGCCCGGGAAAGAACAAGAGAGAAGACCAGGTTGAAGAAGCTTGCTCATCAAGAATCAACGGCAAATAATAATGATCAAAATAACAATAATAATGATAATGATAATAATAAGCAATGCAACAACAACAATGATGATGTGGCAACAAGTGTTATTGGATTGAATCGATTGAGTACATGGAACCCCTTTGAGAATGTTGAAGAATCTGCAGGTACTAATAATAACGATAATCACCATAGTCAAGGCTTGAATCCTCCTTCTTCCCTTGCCCAAGCAGAAGCAGAAGAACCAAGTTCTTCGGCGAAGGATCACCACCAGCCTTTGGAAGCTGCTGCGGAGGACATGGTGCATCACGAAGAAGAATCTCTTGTGATTATGAGCAAATGGAGTCCAACAATGATCTTCAATTCTCTCGTCAATAACTCCTCAATCTTTCAAGAACATCATCAATTTGCAGAATTTCAGTCCATGGGAAAATCCTGGGAGAACTACAACAATTACGCGTAA 1434 0.4296 MYSSPNSSNTIHHFINGNDDQVSPYPNNQPLLFPSSSSSSNVRPFSIESSPSSKEEQANNNNCASTLPPSLPLSPPPTPSFSFFQFPYSPLFEDNEIFLNGEFHFLHHQSLGQSDHNDQAGVVNMEVSITNTNKNSSGQGMTITTAAATATTAPVATTTTTRRRSSKRDRHSKINTARGLRDRRMRLSLEVVRRFFGLQDMLGFDKASKTVEWLLNQAKVEIKQLAREKKKNHQSCSSFNGKSASSTSECEGVSSLDEVAISENQGHNGKLLPTPTTTTKTKKRRGSNKVSRKSSFNPIGKESREKARERARERTREKTRLKKLAHQESTANNNDQNNNNNDNDNNKQCNNNNDDVATSVIGLNRLSTWNPFENVEESAGTNNNDNHHSQGLNPPSSLAQAEAEEPSSSAKDHHQPLEAAAEDMVHHEEESLVIMSKWSPTMIFNSLVNNSSIFQEHHQFAEFQSMGKSWENYNNYA* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2811 477 MobiDBLite consensus disorder prediction 375 414 - -
Ahy1g2811 477 MobiDBLite consensus disorder prediction 262 355 - -
Ahy1g2811 477 MobiDBLite consensus disorder prediction 375 404 - -
Ahy1g2811 477 MobiDBLite consensus disorder prediction 326 355 - -
Ahy1g2811 477 MobiDBLite consensus disorder prediction 1 74 - -
Ahy1g2811 477 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 94 422 IPR005333 GO:0003700
Ahy1g2811 477 MobiDBLite consensus disorder prediction 262 281 - -
Ahy1g2811 477 Coils Coil 215 235 - -
Ahy1g2811 477 PANTHER TRANSCRIPTION FACTOR TCP18 94 422 - -
Ahy1g2811 477 MobiDBLite consensus disorder prediction 151 172 - -
Ahy1g2811 477 Pfam TCP family transcription factor 166 320 IPR017887 -
Ahy1g2811 477 MobiDBLite consensus disorder prediction 228 250 - -
Ahy1g2811 477 MobiDBLite consensus disorder prediction 1 68 - -
Ahy1g2811 477 MobiDBLite consensus disorder prediction 236 250 - -
Ahy1g2811 477 ProSiteProfiles R domain profile. 301 318 IPR017888 -
Ahy1g2811 477 MobiDBLite consensus disorder prediction 298 325 - -
Ahy1g2811 477 ProSiteProfiles TCP domain profile. 167 225 IPR017887 -
Ahy1g2811 477 Coils Coil 304 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2811 Ahy-Chr1 108380397 108382867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2811 163 315 TCP Transcription Factor Family AT3G18550 43.902 3.37e-29 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy1g2811 TCP 1.50E-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2811 - - adu:107471910 735.332