Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2788 ATGCGGTTTGAGCAATTGGAAATGGCTCATGAACTCTATGTGACATACGCAAAGAACGTCGGGTTTGCTACTAAGATACAAATGACAACCTGTGATAAGATCACAAATCTACCCATTAACCAAGCTATTCACTGTAATAGGGATGGGTTCCGTGTGTCACGTGTCAAAGCGTCAACGCGAAAGAACAGGATCTCAGCCGCTGGGTGCAAGGCAAGGATCTACGTGAAGTTTGACAAGGAGACGCAAGACTGGTTTTTCTTCAAGGTGGAGCTGAGTCACTCGCACCCATGTTCAGCGAGAAAGGCGATGCACTACCATGAGTATAGGAAGCTGACCATGCATGCGAAGTGCGTGATCGAGGATAATGATGAGGCTGGAATTCGACCAAACAAGACTTTCCTAGCTTTGGCAAATGAGTCTGGGGGCCCATCTAACCTGGGATACTCGAAAAAGGATTTACGAAACTATATTACAGCTAGGCTTCGAACTAGCAACGTCAACATCGATGTCAGAGAGATGATGAACTATTTCATGAGAATGAAGGACATCAATCCAAACTTCTTCTACGCGGTGAATTTGGACGATGAGTGTAAATTTCAGAGTGCAGTATGGGTAGATGCAAGGTGTAGGGCGTCGTACGAATATTATGGAGATGTTGTGTCACTTGATAGCACATACAGCACAAACAAGCATGGATTACCGTTTGCGTCGTTCGTTGGTGTCAACCACCATGGTAAGTCGACCATCCTTGGTTGTGCTCTTCTTGGAAATGAGGAAATCCCAAGTTATGAGTGGGTTCTCCGCCAATGGGTCAAGTGCATGGGAACTGCTCCAGAGCGGATCATCATCGATCAATGCAAATCCATTTTTCAGGCAATAAAAAATGTGTTACCCGATACACGCCACTATTGGTGCATCTGGCACATTACGAAGAAGTTACCGCACAAGCTTGGAGGTTATCGCCGGTACAGAGAGTTGTATGATGAATTCAATGATATTGTGTGGAACTCTCGGACCGAGAAGTCATTTGAGGATAACTGGTATGAATTCATAGACGAGCACAACTTACATAACAACACATGGCTGTCAGACCTCTTTGATGATCGACGCATGTGGGTCCCAATATTCTTCAAGGGTGAATTTTGGGCTGCCATGAAGAGCACGCAAAGGAGTGAGAGCATGCACTCATTCTACGAAAATTTCTTACACAGTCGGACTAGCTTGGTCCAATTTGTTCACGAATATGACAATGTGCTTGGAATTAAGGAGCAAAGGGAATTGGAGGATGATGCAGCAGACTCGAGGGGGGTTATCCCTTGTGCAACGACGTCACCTATGGAGAGACAATTTCAGCAGGAGTATACTACCTGCATGTTTAGGGATGTTCAAATTGAGTTTGTCAAGAAGGCTAACTGTAGGGTCTTTGTTGTTGTTGAAGAGGGGCCAGTGGTATGTATGAAGGTTGAAGAGGAAAAACTAGTGAATGATATTATTCTTTGTGTTCCGTACGACGTCCACTTCGATCGATCCACACAGGAGGTTCGTGGTGAGTGCAATCTATTTGAGAGTTCAGGAGTGTTATGCTGTCATTGTCTTGAAGTCTTCCATTCTTACAAGGTGTATAAAGTACCTACTCGATATGTACTCCCTCGTTGGAGCAAGAACATAAAGCGCAAGCATACTTATGTCAAGAGTAGTCACGACGTCAGTCGGTCGGATGAGAGTCATGTTGCATTCAGGGGACTATGTGCACACTTCTACAACATTGCTCAGGATTTTGTAAACGACGATGAAAAAACAGCCTTGCTTCATGCTGCTCTAGAAGAAACAAGAGCTAAGCTGACTGCTCATCATGCCAAGAAGAGGTCCGAGAGTGTGACGGACTCCTACAACAATATTGGCTCAAAAAGTTCGAATGTTGCCGCTGTGATGGACATCCAAGCCCCATCAAAGGTCAACACAAAGGGCCGGCCAAAGAGTAAGAGGCTCGGCGCTGCCCTGGAGAAGTCATTTAAAAAATCTGCTAGGAGGAGAAACAAGCATGACCCCCCGCCAACTCAAGATGTAAGATTCGGTGGTGTTGTAGGCCAGACTGATCCCGAACAAGTTGGTGGCTTCATGTCTTTGTTAAGCTCCTTTAGCAAAAGTTAA 2151 0.4528 MRFEQLEMAHELYVTYAKNVGFATKIQMTTCDKITNLPINQAIHCNRDGFRVSRVKASTRKNRISAAGCKARIYVKFDKETQDWFFFKVELSHSHPCSARKAMHYHEYRKLTMHAKCVIEDNDEAGIRPNKTFLALANESGGPSNLGYSKKDLRNYITARLRTSNVNIDVREMMNYFMRMKDINPNFFYAVNLDDECKFQSAVWVDARCRASYEYYGDVVSLDSTYSTNKHGLPFASFVGVNHHGKSTILGCALLGNEEIPSYEWVLRQWVKCMGTAPERIIIDQCKSIFQAIKNVLPDTRHYWCIWHITKKLPHKLGGYRRYRELYDEFNDIVWNSRTEKSFEDNWYEFIDEHNLHNNTWLSDLFDDRRMWVPIFFKGEFWAAMKSTQRSESMHSFYENFLHSRTSLVQFVHEYDNVLGIKEQRELEDDAADSRGVIPCATTSPMERQFQQEYTTCMFRDVQIEFVKKANCRVFVVVEEGPVVCMKVEEEKLVNDIILCVPYDVHFDRSTQEVRGECNLFESSGVLCCHCLEVFHSYKVYKVPTRYVLPRWSKNIKRKHTYVKSSHDVSRSDESHVAFRGLCAHFYNIAQDFVNDDEKTALLHAALEETRAKLTAHHAKKRSESVTDSYNNIGSKSSNVAAVMDIQAPSKVNTKGRPKSKRLGAALEKSFKKSARRRNKHDPPPTQDVRFGGVVGQTDPEQVGGFMSLLSSFSKS* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2788 716 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 1 579 - -
Ahy1g2788 716 Pfam FAR1 DNA-binding domain 12 97 IPR004330 -
Ahy1g2788 716 MobiDBLite consensus disorder prediction 671 697 - -
Ahy1g2788 716 Pfam MULE transposase domain 219 312 IPR018289 -
Ahy1g2788 716 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 579 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2788 Ahy-Chr1 107927693 107930140 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy1g2788 MULE 1.70E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2788 - - ahf:112732819 1210.67